Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1745 ATGGAGCTTGGATCAGTGGTTGAAGCAGTTTCTGCTGATGTTGGTACTGGTGGCGCCGCTCCTCTCTACAACATTGAAAGCTTTGAAAGCCTATGCATGCATTGTGGTCAAAACGGCACTACAAATTCCTTCATCACTCTCATTCCTCACTTCAAAAAGATTTGGTTGTCTGCTTTCGATTGTCCTCACTGTGGTGACAAGAACAATGAAGTAATGTTTGTTGGCGATATTCCACCGCATTGTTGCTGCTACACCCTGAAGATCTCATCCGGCAATTCAGAGATGCTCAATAGGCAAGTGGTAAAATCAGAACATGCTACCATTAAGATACCAGAATTGGATTTTGAGATTCAATCAGAGGCTCGATGTGGTAGTCTATCAACGGTAGAAGGGATACTGATGCGAGCTGCTGATGACCTTCAAGCCCTTCAAGAGGAACGCAAAAAAGTAGCTCCAGAGACAGCTGAAGCAATCGACCAGTTCTTGGTAAAATTGCGAGCCTGTGCAGCAGGAGAATCATCATTTACATTTATTCTTGACGATCCTGCTGGAAATAGCTTCATTGAAAACCCGTTTGCGCCATCATCCGATCCATCACTAACAATCAATTTTTACGATCGAACTCCTGAGAAACAAGCATTATTGGGATATCAAGCAAGGGAAGAACCACACGGGTCAGTAGGGGCAACAGCAGGTCACAGAGCTATTGCACAGAGTAACAGCGCAGAAATTGCAGAAGCCTTATTTCGATATACTGCACCAGAAGAGGTGTATGCTTTCCCGGTAACTTGTGGTTGTGGTAGTGGATGTGAAACTCGAATGTTTCCAATTGATATTCCGTACTTCCAAGAAGCAATTGTTATGGCATCCACTTGCGATGCTTGTGGTTACCGCAGCTCTGAGTTGAAAGCCGGTGGAGAAGTTTCAAAAAAAGGAAAAAGCATTACTCTTTCTGTGCAAAACGTTAACGACCTAAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAATTCCTGAACTTGACTTCGAGCTGGCAAGTTGCAGTCGCACTATCGGAGGAGTTGTTACAACTGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGGATCCATGGGTTTACTTTCGGAGATAGTCTTGAGGAACATAGTCGAAGCAAGTGGTTGGACTTTGAGGACAGACTAAACAAGATTCTTAGCTTGGAAACACCTTGGACTTTAATTCTTGATGATGCATTAGCATGCTCTTTTATAGCACCTGCAACTGATAATCTGGAAGACGACAAACAGTTAACTTATGAGGAATATGAGAGGACATGGGAGCAAGAGGAAGAATTAGGACTGCATCAGATGGACACCACTTCTGCCGATGCTGCTTATGAATCATAA 1398 0.4306 MELGSVVEAVSADVGTGGAAPLYNIESFESLCMHCGQNGTTNSFITLIPHFKKIWLSAFDCPHCGDKNNEVMFVGDIPPHCCCYTLKISSGNSEMLNRQVVKSEHATIKIPELDFEIQSEARCGSLSTVEGILMRAADDLQALQEERKKVAPETAEAIDQFLVKLRACAAGESSFTFILDDPAGNSFIENPFAPSSDPSLTINFYDRTPEKQALLGYQAREEPHGSVGATAGHRAIAQSNSAEIAEALFRYTAPEEVYAFPVTCGCGSGCETRMFPIDIPYFQEAIVMASTCDACGYRSSELKAGGEVSKKGKSITLSVQNVNDLSRDVIKSDTASVKIPELDFELASCSRTIGGVVTTVEGLITKISESLERIHGFTFGDSLEEHSRSKWLDFEDRLNKILSLETPWTLILDDALACSFIAPATDNLEDDKQLTYEEYERTWEQEEELGLHQMDTTSADAAYES* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1745 465 PANTHER ZINC FINGER PROTEIN ZPR1 3 464 IPR040141 -
Tpr5g1745 465 MobiDBLite consensus disorder prediction 445 465 - -
Tpr5g1745 465 Coils Coil 126 146 - -
Tpr5g1745 465 Pfam ZPR1 zinc-finger domain 30 189 IPR004457 GO:0008270
Tpr5g1745 465 Pfam ZPR1 zinc-finger domain 265 421 IPR004457 GO:0008270
Tpr5g1745 465 SMART zpr1 262 423 IPR004457 GO:0008270
Tpr5g1745 465 SMART zpr1 30 190 IPR004457 GO:0008270
Tpr5g1745 465 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 3 464 - -
Tpr5g1745 465 Gene3D ZPR1, zinc finger domain 23 75 IPR042452 -
Tpr5g1745 465 Gene3D ZPR1, A/B domain 307 451 IPR042451 -
Tpr5g1745 465 Gene3D ZPR1, A/B domain 76 217 IPR042451 -
Tpr5g1745 465 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 265 454 IPR004457 GO:0008270
Tpr5g1745 465 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 32 216 IPR004457 GO:0008270
Tpr5g1745 465 Gene3D ZPR1, zinc finger domain 256 305 IPR042452 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1745 Tpr-Chr5 35404681 35411752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1745 1 465 C2H2 Transcription Factor Family AT5G22480 66.598 0.0 653