Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1732 ATGGATCCTGTAAGGGATGTTGGTAGTGTTGTAGGGACAGTGTTGATTCCCATGCGGTTTGTGTGGCCATATGGTGGGAGAAGTGTTTTTCTCAGTGGTTCTTTCACAAGGTGGTCTGAGCTTTTGCCAATGTCTCCAGTGGAAGGTTGCCCAGCCGTATTTCAAGTTATTTATAGATTGCCCCCGGGTTACCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCGACATGATGAGCATCAACCTTACGTACATGGACAATATGGGATTGTCAACACTGTCTTATTGGCAACTGATCCTAACTACATACCTCTTATAACTTCAGACATTGCTTCCGGAAATAACATGGATGTGGATAATGAGACTTTTCGCCGCGTGGTCCGGGTGGCGGACGATGCATTGAGTGAGGTGCTTCCAAGAATATCAGATACTGATGTACAGATTTCTCGTCAGCGTATTTCTGCATTTCTGTCTAAGCACACAGCTTATGAATTACTTCCTGAGTCAGGCAAGGTTGTTGCGTTGGATGTTGATTTACCAGTGAAACAAGCATTTCATATACTGCATGAGCAGGGAATATACATGGCTCCTCTCTGGGACATGTGCAAGGGGCAATTTGTTGGTGTTCTTAGTGCTTTGGATTTTGTCTTAATTTTAAGGGAGTTGGGGAATCGTGGGTCTAATCTGACAGAAGAGGAGCTTGAAACACATACCATATCGGCTTGGAAAGAAGTAAAGTCATATCTAAACAAACAGAACAATGGACATGGAACTGCATTTTCTAGACATCTTATCCATGCAGGACCATATGATAATCTTAAAGATATTTCCATGAAGATCTTACACAAGGAGGTCTCAACAGTCCCTATTATCCATTCAACTTCTGAAGATGGTTCATTTCCACAGTTACTACATCTTGCTTCACTTTCAGGAATACTCAAATGCATTTGTAGGTATTTTAGGAATTGCTCTAGTTCATTGCCTATACTACAACTTCCAATCTGTGCAATACCTGTGGGCACATGGGTGCCCAAAATCGGGGAATCAAATCGACGGCCTCTAGCAGTATTGCGACCGAGCTCTTCTCTTGCTTCAGCCCTAAATTTATTAGTTCAAGCTCAAGCAAGTTCAATACCAATTGTTGATGATAATGACTCATTACTGGATATATATTGTCGAAGTGATATAATGGCTTTGGCAAAGGACAAGGCATATACACATATCAATCTTGATGAAATGACTGTTCAACAGGCTTTGCAGTTGGGCCAGGACGCATACGAGCTTAGAAGTCAACGATGTCAGATGTGTTTGCGTTCTGATTCACTGCATAAAGTGATTGAGCGTTTGGCAAATCCAGGTGTGAGGCGGATTGTTATCGTGGAAGCAGGCAGCAAGCGTTTAGAAGGCATTGTCTCATTGAGTGACATATTCAAGTTCTTTCTCAGTTAG 1449 0.4217 MDPVRDVGSVVGTVLIPMRFVWPYGGRSVFLSGSFTRWSELLPMSPVEGCPAVFQVIYRLPPGYHQYKFFVDGEWRHDEHQPYVHGQYGIVNTVLLATDPNYIPLITSDIASGNNMDVDNETFRRVVRVADDALSEVLPRISDTDVQISRQRISAFLSKHTAYELLPESGKVVALDVDLPVKQAFHILHEQGIYMAPLWDMCKGQFVGVLSALDFVLILRELGNRGSNLTEEELETHTISAWKEVKSYLNKQNNGHGTAFSRHLIHAGPYDNLKDISMKILHKEVSTVPIIHSTSEDGSFPQLLHLASLSGILKCICRYFRNCSSSLPILQLPICAIPVGTWVPKIGESNRRPLAVLRPSSSLASALNLLVQAQASSIPIVDDNDSLLDIYCRSDIMALAKDKAYTHINLDEMTVQQALQLGQDAYELRSQRCQMCLRSDSLHKVIERLANPGVRRIVIVEAGSKRLEGIVSLSDIFKFFLS* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1732 482 ProSiteProfiles CBS domain profile. 349 412 IPR000644 -
Tpr5g1732 482 SUPERFAMILY CBS-domain pair 152 322 IPR046342 -
Tpr5g1732 482 ProSiteProfiles CBS domain profile. 165 227 IPR000644 -
Tpr5g1732 482 Gene3D Immunoglobulins 16 107 IPR013783 -
Tpr5g1732 482 Pfam CBS domain 351 398 IPR000644 -
Tpr5g1732 482 Pfam CBS domain 434 480 IPR000644 -
Tpr5g1732 482 Gene3D - 341 482 IPR046342 -
Tpr5g1732 482 Pfam Glycogen recognition site of AMP-activated protein kinase 16 98 IPR032640 -
Tpr5g1732 482 PANTHER CBS DOMAIN, IMMUNOGLOBULIN E-SET-RELATED 9 481 - -
Tpr5g1732 482 ProSiteProfiles CBS domain profile. 428 482 IPR000644 -
Tpr5g1732 482 SUPERFAMILY CBS-domain pair 349 481 IPR046342 -
Tpr5g1732 482 Gene3D - 142 325 IPR046342 -
Tpr5g1732 482 SMART cbs_1 432 481 IPR000644 -
Tpr5g1732 482 SMART cbs_1 171 220 IPR000644 -
Tpr5g1732 482 SMART cbs_1 353 401 IPR000644 -
Tpr5g1732 482 CDD E_set_AMPKbeta_like_N 17 95 - -
Tpr5g1732 482 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 9 481 - -
Tpr5g1732 482 SUPERFAMILY E set domains 16 97 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1732 Tpr-Chr5 34921268 34930615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1732 6 124 Protein tyrosine phosphatase (PTP) family AT3G01510 29.688 1.40e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1732 - - gmx:100785692 837.41