Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1712 ATGAATTCATCATCAATTCCAAATTGTGTTGATAAATGGGTGAATAATATCCATGAACAAAATGTGCAACATGGCCAAGAAAATATTGTCAACATTGAACCTCATTTGGGAATGAAATTTGAATCTGAAGCCGCTGCTTATGAATTTTACAATGAGTACGGTAAAAGAAATGGATTTGGTATTCGTCGAGAATATTTTAATAAAAGCAAAGTAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGGTAAACGAAGTGTTGACAAAAGACGTACAGGAGAACATAGAGCAGAAACCAGAACGGAATGTCCAGCACGTATGGTTATTTCACTTGATCGGAAGATAGAGAAATACAATGTTGTTGACTTTATAGCTCAACATAACCATCCACTTCAACCACCCGAGCATGTTCATATGATTCGCTCTCATCGGCACATATCTGAGGCACAAGCAACACAAATTGTCTTGGGAGATGAATCTGGATTAAGACCAAAAGATTTGCATGAATATATATCCAGACAAGCTGGTGGAATAGAGACTGTTGGTTTTACAAAAAAAGACCTTAAGAATTACCTACAAACCAAAAGGAATCAAACATTAAAGCATGGTGAAGTGGGTGCATTGATGATGTATTTCAAACAAGAAAGTGAAAATCCCTCATTCTTTTATGACTTTCAAATGGATGATGAAGAGCAAATAATAAATATATTTTGGGCGGATGCACAAATGATAAATGATTATGGGTACTTCAGTGATGTCATCACTTTTGACACTACATACAAGACAAATAAGGATTGTCGACCGTTGGGAGTATTTGTTGGACTCAATAATCACAAGCAAACTGTCATTTTTGGGGCAACATTGTTATATGATGAAACAATATCTTCTTTTCGGTGGTTATTTGAAACTTTTCTCAAAGCAATGAGTGGAGAAAAGCCTAAAACTATTCTAACAGATCAAGATGCCGCAATGGCTAAGGCGATTTCTTTAGTTATGCCAGAAACATTTCATGGATTGTGCACTTGGCATATAAGACAGAACGCTGTAAGACATGTGAATCATTTATATCAAAGGAGTTCGCAATTTAATTTAGATTTTGAAGCATGCATGGATCTACATGAAGAGGAGGTTGAACTTTTGAATGCATGGAATTCTTTACTTCTTGAGCATAATGTTTTGGAAGGTTCGTGGTTGCATACAATTTTTCAATTCAAGGAAAAATGGGCATGGGCTTATGTTCGGAAAACATTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGCTTTAATGCTGATTTAAAAAAGCATTTGAAGTCAGATTTAAATTTGGTACAATTTTTTACACACTTTAAAAGGGCTGTCGATGGTAAACGTAACAATGAGTCAGAAGCCGAATATGACTCAAAACATAAGTTGCCCAAATTGAAAATGAAGGCTCGTATGCTCATTCATGCCGGAGATGTTTACACTCCAAGAATTTTCCAGGAATTCCAAGAGGAATATGAACAATATCAAAACTGCTACATAAAGGATTTGCAAGGAGGTTTGTATGTTGTAACAAATTGTGATAATGCAAAGGAGAGGAAGGTAATTGGAAATCTTATGGAACAAAAAGTCTCTTGTGATTGTCGTAAATTTGAGACACATGGTATCTTATGTTGTCATGCTTTAAAAGTTTTAGATGTCATGAATATTAAGTCAATTCCTGAACACTACATACTCAAGCGATGGACAAGAGATGCAAGATTGGGAAGTAATTGGAAAGGGAGGCATGTTGAATTAGACATAAAAGCTAATTTCATGATGCGATACAATGAGTTATGTCCTCAAATGATTAAATTGACCAACAAATCTTCAGAAACTCATGAAACTTACACATTTATGTCCAAAGTTTGTGAAGAGTCTAGGAAAATAATTGATGATATGTTAGCCAAAAAGCATGTGGATGGAGAGGTTCATGTATCCATATCAATTGGAAATGATCAAATTGATAATGTGGACACTGTTGGCATGGCAAGAGGCATAAAGGCACGAAATTGTTCACGGAAGGGTAAAAAACGATATTTATCTTGGGTTGAGAGATCAGCAAAAAAGACAAAGAGGTACTCACAATCACAAAAAAAGAAAAAGACACAATCGTTATCGCAGCAAACTACAATCCAAGAGACGCAATCAAGCCAAGTTGACAATGAAACTCAACATCAAGCTACCGTCCAAGCAACGCAATCACACCAACTTAATAATAGAACTCAGTATCAACGTCCAAGAGACACAGTCACACCAAGTTAA 2301 0.3581 MNSSSIPNCVDKWVNNIHEQNVQHGQENIVNIEPHLGMKFESEAAAYEFYNEYGKRNGFGIRREYFNKSKVDGVLTSRRFTCFKEGKRSVDKRRTGEHRAETRTECPARMVISLDRKIEKYNVVDFIAQHNHPLQPPEHVHMIRSHRHISEAQATQIVLGDESGLRPKDLHEYISRQAGGIETVGFTKKDLKNYLQTKRNQTLKHGEVGALMMYFKQESENPSFFYDFQMDDEEQIINIFWADAQMINDYGYFSDVITFDTTYKTNKDCRPLGVFVGLNNHKQTVIFGATLLYDETISSFRWLFETFLKAMSGEKPKTILTDQDAAMAKAISLVMPETFHGLCTWHIRQNAVRHVNHLYQRSSQFNLDFEACMDLHEEEVELLNAWNSLLLEHNVLEGSWLHTIFQFKEKWAWAYVRKTFTAGMRSTQLSESFNADLKKHLKSDLNLVQFFTHFKRAVDGKRNNESEAEYDSKHKLPKLKMKARMLIHAGDVYTPRIFQEFQEEYEQYQNCYIKDLQGGLYVVTNCDNAKERKVIGNLMEQKVSCDCRKFETHGILCCHALKVLDVMNIKSIPEHYILKRWTRDARLGSNWKGRHVELDIKANFMMRYNELCPQMIKLTNKSSETHETYTFMSKVCEESRKIIDDMLAKKHVDGEVHVSISIGNDQIDNVDTVGMARGIKARNCSRKGKKRYLSWVERSAKKTKRYSQSQKKKKTQSLSQQTTIQETQSSQVDNETQHQATVQATQSHQLNNRTQYQRPRDTVTPS* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1712 766 Pfam SWIM zinc finger 544 565 IPR007527 GO:0008270
Tpr5g1712 766 SMART 26again6 543 570 IPR006564 GO:0008270
Tpr5g1712 766 Pfam MULE transposase domain 256 350 IPR018289 -
Tpr5g1712 766 Pfam FAR1 DNA-binding domain 48 136 IPR004330 -
Tpr5g1712 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 13 671 IPR031052 GO:0006355
Tpr5g1712 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 13 671 - -
Tpr5g1712 766 ProSiteProfiles Zinc finger SWIM-type profile. 521 568 IPR007527 GO:0008270
Tpr5g1712 766 MobiDBLite consensus disorder prediction 699 766 - -
Tpr5g1712 766 MobiDBLite consensus disorder prediction 712 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1712 Tpr-Chr5 34243548 34245934 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g1712 MULE 1.5e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1712 - - cam:101500125 1143.64