Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1667 ATGTTAACTCTAAAAGGAGGGAGCAGGCCACCATGGGTAGGTTTAGGAGCAGCCGTTTGGGTTCAAATAGCTTCAGGAAACACCTTTACTTTTCCTCTATACTCACACTCTTTGAAATCTGTCTTAGGTTTCAACCAAAGACAGGTTACACTCCTTGGTGTTGCTAATGATATTGGTGAAAACGTTGGTTTGTTACCTGGTATTGCTTGTAATACTTTCCCACCTTGGCTCATACTTTCTGTCGGTGCTTTTGCTTCTTTTATTGGTTATGGTGTTCTTTGGCTCGTTGTTTCACAAACACTCACTAATCTTCCTTACTTGTTGCTTTGGTTTGCCCTTGTCATTGCTTCCAACAGTAGTGCATGGTTAACTACTGCGGTTCTCGTAACAAACATGCGGAATTTCCCTGTAAGTAGAGGCAAAGTTGCGGGAATCCTGAAAGGTTATGGAGGGCTTAGTGCTGCAGTTTTCACCGAAATTTACAGCTTACTTCTTCATAATTCTTCTTCTAAGTTCCTCTTGTTGCTTGCCATTGGTATTCCAGTTGTTTGCTTCAGCATGATGTTTCTTGTTAGGCCTTGTACCCCAGCATTGGATGAAGACTCGACATCTAATTCTCATTTTATATTTATCCAGTGTTCTAGTGTGGTCTTGGGTATATATCTTCTCGCAACTACAATATTCGGCAATCTTCTTCCATTTAGTGGTACAGTTTCCTATATTTTGATTGCTGTGATGATTGTTCTTCTCATGGCTCCAATTGCTGTTCCTATAAAGATGACATTGTATGGTAAGTCAACTTCAAATTCTGCGGAACGAGTTGGATCTTCCGACTCTCTCAGTCAAGGCAACAATGACAAAATAGAGCCACTGCTAGGATCTTCGTCGGCAGGAGCACTTGGAAGCTCGAACGATCAGGATGATTCATCTGAGGTAGCTATGCTTCTTGCATTAGGTGAGGGAGCGATAAAGCAGAAGAAGAGAAAACCTAAACGTGGGGAAGATTTTAAGTTTACTGAGGCTATAGTTAAGGCTGATTTCTGGCTACTGTTTATTGTTTATTTTGTTGGTGTTGGCACTGGAGTTACTGTTCTCAATAATCTAGCCCAAATAGGTATTGCTCAGGGTGAAGAAGATACTACAACCTTACTGTCAATATTCAGTTTTTGCAATTTCGTTGGTCGGCTTGGTGGAGGAGTTGTTTCGGAGCATTTTGTCAGGACAAAATTAATCCCAAGGACATTCTGGTTGACATGCACACAGACAGTCATGCTATTGGTATACCTTCTGTTTGCCTTTGCTGTCAACGGAACCCTTTATCCTGCAGTTGCATTTCTCGGTGTTTGCTATGGCGTACAAGTTTCCATAATGATCCCGACTGTTTCGGAGCTTTTTGGTTTGAAGAACTTTGGTGTACTAAGCAATGTCATGTCGTTGGGAAATCCACTTGGAGCAACCCTTTTCTCAGCTTTGCTTGCAGGTTCTATATATGATAATGAGGCAGCAAAGCAGCATGGTATTAACCTCATTGCATCTGGTGCTTCCTGCATCGGCGCAAATTGCTTTAAGCTGACATTTTTCATTCTTTCTGGTGTTTGTGCTGCTGGAATCATCTTGAGCATTATTCTTACTTTGAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGAGGCTCTTTCAGAGTTCCTCAAACAACTCCGAGTCGCTAA 1710 0.4164 MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACNTFPPWLILSVGAFASFIGYGVLWLVVSQTLTNLPYLLLWFALVIASNSSAWLTTAVLVTNMRNFPVSRGKVAGILKGYGGLSAAVFTEIYSLLLHNSSSKFLLLLAIGIPVVCFSMMFLVRPCTPALDEDSTSNSHFIFIQCSSVVLGIYLLATTIFGNLLPFSGTVSYILIAVMIVLLMAPIAVPIKMTLYGKSTSNSAERVGSSDSLSQGNNDKIEPLLGSSSAGALGSSNDQDDSSEVAMLLALGEGAIKQKKRKPKRGEDFKFTEAIVKADFWLLFIVYFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFVRTKLIPRTFWLTCTQTVMLLVYLLFAFAVNGTLYPAVAFLGVCYGVQVSIMIPTVSELFGLKNFGVLSNVMSLGNPLGATLFSALLAGSIYDNEAAKQHGINLIASGASCIGANCFKLTFFILSGVCAAGIILSIILTLRIKPVYQMLYAGGSFRVPQTTPSR* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1667 569 SUPERFAMILY MFS general substrate transporter 221 549 IPR036259 -
Tpr5g1667 569 Pfam Nodulin-like 11 258 IPR010658 -
Tpr5g1667 569 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 568 - -
Tpr5g1667 569 SUPERFAMILY MFS general substrate transporter 11 198 IPR036259 -
Tpr5g1667 569 CDD MFS_Mch1p_like 10 537 - -
Tpr5g1667 569 Gene3D MFS general substrate transporter like domains 342 552 IPR036259 -
Tpr5g1667 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1667 Tpr-Chr5 32855462 32859295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1667 2 566 Nodulin-like Gene Family AT1G80530 55.026 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1667 - - gmx:100794012 912.524