Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1633 ATGGCTGTGGAGAATCAAAAGGATCATTTGAGAGATGAAGAAGAAGATGGTTTCATTAACCGTTTTCCTATTGTCGGTATGCGTGTTCTTGCTGTTGATGACAATCCAACTTGTCTCAAAGTTTTGGACAAATTGCTTCGTCAATGCGAATATCATGTTACTACTACTACTAATGCAATTGAGGCGCTGAGAATGTTGAGGGAAAACAGAAATAACTTTGACTTGGTTATTAGTGATGTTGATATGCCTGATATGGATGGATTTAAGCTCCTTGAGATGGTGGGACTTGAAATGGACTTACCTGTCATTATGTTGTCGGGACATAGGGATAGAAACATGGTGTTCAAGGGTATTTCACATGGTGCATGTGACTATTTGCTGAAACCTGTTCGACTTGAAGAGCTCCAGAACATATGGCAACACGTAGTCCGAAAACAAACAACTGCTTCCAAGGATCAGAATAAGGCTTCCAATGAGGATAGGAACCCTAATATTTCTGGGGGAAATAGTCAAAACGTATTGGAGAACATTGCTGAACAGAATAAAAACCTAGGTAAAAGAAGGAAGGACCAAGCCGAGGAGGAAGAAAATGAAGACGGTGAAGGGACTGGAGATGAGGATGACCCCTCATCGCAGAAGAAACCTCGTGTGGTTTGGTCTGTTGATCTGCATAAGAAATTTCTTATTGCTGTTAATCAACTTGGCTTGGAAAAGGCTGTTCCGAAGAAAATACTTGACCTGATGAATGATGAAAGGCTTACCAGGGAAAATGTGGCAAGCCATCTACAGAAATTTAGACTCTATCTGAAAAAGGCAAACCATCATCAAGGTAACATGGTTGCTGCATTGGGTGGTGGTAACGATTCTTACTTTCAGATGAATGGAATGGAAGGATATGCAAATTTCTGCACCTCAACTGGATCTGGAACGATCTCAAGCACCGGAATGCCATCTTGTCCATCAAGTGCAGTTTTCGGTAGGCTGAACTCTCCAGCTGGCCTTAACATGAGAGGAATGAGTTCTTCAACGCTGGTTCAGCCTGTTCCGTCTCAAAACATCAACAACTCCTGGATTCCTGCAAATCAAAGCTCAAGCTTATTACATGGCATTCCAACTCAGCTTAACCAATCTAAGCTAAACAATTGTGCTACTGGTATATCACAGTTAACTCAAATAGATTCCACTGGATTTGCAGTTCCGTCTGGCTTCCACAATAGTAGGGCTACTCTTAGTAATGCAAACAATTCTCTACAAGTCTCAAATCATCATTTAATGATGGACGGAAATTCACAGCAGACACACAATTCAGGGTCATTTAGAAATCAGTCTTCAGTTGGATCTGCTTCTTTGGGAAACACAAACGCTGGCATTGGTGGTTTTTCTAATTTGTTGGATTATAATCACTGCAATGAAAACTGGCAAAGTCAAGCTCAGCTACCTAAATTTCCTGCCAATTCTTTGCCAGTATGCGAGTCTTTCAATGGCAACCAACTGCATCCCACTAGCATTACTGCTTTTAACCCAAGGCCTTGTGTTGGTAACAATCAAGTTGACTTTTCGTCTGGAAATGTAATCACTGCTACTTTGGAGGATGCCAGAAATGTGCCAAGTTTCCAAGAAGGCGGCTTGATTGGGAATGTTATACAGCCTACAAGTTATGCTGTGCAACAAAGGTGGGAAGAACATAAAGTTGATTACAGCCAAAACATGATCCGTCCCTTCAATCCTATAAATTTACAGGTTTCTTCCAGCAGGGAAGCGACAAATTTTGTGGTGCATAATACAAACCAAAGTAAAACAGTTTGCAACAATAGAGTTGATGCATCTTTTGTTGATCAAGTAAATGGCACTTCTACATCAGTTGGCCATTGCACTGAAGTTGAGAAATTATCATCAGACTTACGAGTTAACTCGAATGATGCCTACATGAGGGAGATTATGGCGTCCCAAGTTGGATATATTCCCGGTTTTGGAACCATAAATGACATAATGGGTACAATGGTAAAAAGGGTATGA 2016 0.4097 MAVENQKDHLRDEEEDGFINRFPIVGMRVLAVDDNPTCLKVLDKLLRQCEYHVTTTTNAIEALRMLRENRNNFDLVISDVDMPDMDGFKLLEMVGLEMDLPVIMLSGHRDRNMVFKGISHGACDYLLKPVRLEELQNIWQHVVRKQTTASKDQNKASNEDRNPNISGGNSQNVLENIAEQNKNLGKRRKDQAEEEENEDGEGTGDEDDPSSQKKPRVVWSVDLHKKFLIAVNQLGLEKAVPKKILDLMNDERLTRENVASHLQKFRLYLKKANHHQGNMVAALGGGNDSYFQMNGMEGYANFCTSTGSGTISSTGMPSCPSSAVFGRLNSPAGLNMRGMSSSTLVQPVPSQNINNSWIPANQSSSLLHGIPTQLNQSKLNNCATGISQLTQIDSTGFAVPSGFHNSRATLSNANNSLQVSNHHLMMDGNSQQTHNSGSFRNQSSVGSASLGNTNAGIGGFSNLLDYNHCNENWQSQAQLPKFPANSLPVCESFNGNQLHPTSITAFNPRPCVGNNQVDFSSGNVITATLEDARNVPSFQEGGLIGNVIQPTSYAVQQRWEEHKVDYSQNMIRPFNPINLQVSSSREATNFVVHNTNQSKTVCNNRVDASFVDQVNGTSTSVGHCTEVEKLSSDLRVNSNDAYMREIMASQVGYIPGFGTINDIMGTMVKRV* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1633 671 MobiDBLite consensus disorder prediction 146 215 - -
Tpr5g1633 671 Gene3D - 27 213 - -
Tpr5g1633 671 SMART REC_2 27 139 IPR001789 GO:0000160
Tpr5g1633 671 Pfam Response regulator receiver domain 29 137 IPR001789 GO:0000160
Tpr5g1633 671 MobiDBLite consensus disorder prediction 146 179 - -
Tpr5g1633 671 CDD REC_typeB_ARR-like 29 143 - -
Tpr5g1633 671 SUPERFAMILY Homeodomain-like 212 271 IPR009057 -
Tpr5g1633 671 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 670 IPR045279 GO:0009736
Tpr5g1633 671 SUPERFAMILY CheY-like 26 151 IPR011006 -
Tpr5g1633 671 MobiDBLite consensus disorder prediction 427 447 - -
Tpr5g1633 671 PIRSF RR_ARR_type-B 2 650 IPR017053 GO:0003677|GO:0003700|GO:0009736
Tpr5g1633 671 Gene3D - 214 272 - -
Tpr5g1633 671 ProSiteProfiles Response regulatory domain profile. 28 143 IPR001789 GO:0000160
Tpr5g1633 671 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 214 267 IPR006447 GO:0003677
Tpr5g1633 671 Coils Coil 174 195 - -
Tpr5g1633 671 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1633 Tpr-Chr5 31723285 31727181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1633 19 423 Response Regulator Gene Family AT2G25180 49.161 1.40e-114 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr5g1633 Response_reg 2e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1633 K14491 - gmx:100776075 807.749