Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1618 ATGACAAATTCATGGAATTTCAACAATCAAGAAGAAGAAAAAGAAAGAAGAAGAAGAAGAAGAAGAACGACGATGATTCGCTTTGGTTTGTTCCTTTCAATTGGAACATCTATTTTCATCGTGTTGGCTTATTTCTTGAGCCGACACTTAGTAGTCAGAGTATTGATTTCCGAAGCTGACAAGGTGATCCATTTACCTGATCAGCCGGAGGTTGACTTCCAACAGTTTGCTGGCTACATTACTGTTGATGAAATCAACCAAAGGAACCTCTTCTACTATTTTGTAGAATCTGAGGTTGATCCTGTATCAAAACCTGTAGTCCTATGGTTAAATGGAGGACCTGGTTGTTCTTCTATTGGTCAAGGAGCATTTACTGAGCATGGTCCTTTCCAGCCCACCAGAAAGGGTGGTCTAGTAAAAAATCAGTACAGCTGGAACCGAGCGGCAAACATGCTGTATTTGGACTCTCCGGCCAGTGTTGGTTTCTCCTACTCCACCAACAAATCCTTTTATGATTTGCTGAACGATGAACTGACAGCACGTGATAACCTTGTATTTCTTCGTGGTTGGTTCACCAAATTCCCACAATACAAGGACAATGACTTCTTTATCACAGGGGAGGACTATGCAGGTCACTTTGCTCCACAACTTGCACACCTCATTCTCCAAGGCAAAACCAAGATCAATCTTAAAGGGATTGCAGTGAGTACGAATATAAACCTGGTTATATATATATATATAGTATATATTTCAAAAGAATTTCACTGGCTCCCATATTTATATTTGCAGATAGGCAATCCTCACCTAGAATTCAACACAGATACCAATTCCAAAACAGATTTTTTATGGGCTCATGGGTTGATTTCTGATAAAACATATGGGATGTTGCTGAAACTTTGCAATTATTCCCAGATCAGTAGGGAATATCGAAATCTGACAACTGAGAGCAACATCTGTCGTAAAGTGGCTATTCAAGTGGCAAAGGAGATTGGTGCTGTTGTCGATTATTCTTACATCAGGGATGATATTTGCTCTCAGACAAAACAACAACTGCAAGGGGAACAAAAGAGGGATGCTTGTGTGGAACGTGAAACACACACCTATTTGAATAGGAAGGATGTCCATAAAGCACTTCACGCCGTACTCGTTGGTATCAACAAATGGTCTTCCTGCTCCGGTTTTTTAACATATGACGTGCAAAATTTGGATATCCCAACTATATCTCTTCTCGGGTCACTTGTTAGATCAGGTGTAAGAGTAATGGTGTATAGTGGAGATCAAGATTCAGTGGTACCATTTATGGGGACACGATCTCTAGTAAATCGATTAGCCGAGGAGATCGGATTCAAGACATCACAGCCCTATAGAACATGGTTTGTGGGGAAACGGGTTGCTGGATGGAATCAAGTATATGGGGATATCCTTACATTTGCAACCGTAAGGGGGGCAGGTGGTGCAGCTCCAGCTACTCAACCTGAGAGTTCGTTGGTGTTGTTTAAAGCCTTTTTGGAAGGAAAACCACTTCCAAATAATCATTGA 1539 0.4107 MTNSWNFNNQEEEKERRRRRRRTTMIRFGLFLSIGTSIFIVLAYFLSRHLVVRVLISEADKVIHLPDQPEVDFQQFAGYITVDEINQRNLFYYFVESEVDPVSKPVVLWLNGGPGCSSIGQGAFTEHGPFQPTRKGGLVKNQYSWNRAANMLYLDSPASVGFSYSTNKSFYDLLNDELTARDNLVFLRGWFTKFPQYKDNDFFITGEDYAGHFAPQLAHLILQGKTKINLKGIAVSTNINLVIYIYIVYISKEFHWLPYLYLQIGNPHLEFNTDTNSKTDFLWAHGLISDKTYGMLLKLCNYSQISREYRNLTTESNICRKVAIQVAKEIGAVVDYSYIRDDICSQTKQQLQGEQKRDACVERETHTYLNRKDVHKALHAVLVGINKWSSCSGFLTYDVQNLDIPTISLLGSLVRSGVRVMVYSGDQDSVVPFMGTRSLVNRLAEEIGFKTSQPYRTWFVGKRVAGWNQVYGDILTFATVRGAGGAAPATQPESSLVLFKAFLEGKPLPNNH* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1618 512 Gene3D alpha/beta hydrolase 56 346 IPR029058 -
Tpr5g1618 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 153 IPR001563 GO:0004185|GO:0006508
Tpr5g1618 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 164 IPR001563 GO:0004185|GO:0006508
Tpr5g1618 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 190 215 IPR001563 GO:0004185|GO:0006508
Tpr5g1618 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 475 488 IPR001563 GO:0004185|GO:0006508
Tpr5g1618 512 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 47 496 IPR001563 GO:0004185|GO:0006508
Tpr5g1618 512 Gene3D - 360 395 - -
Tpr5g1618 512 PANTHER CARBOXYPEPTIDASE 47 496 - -
Tpr5g1618 512 Gene3D - 407 505 - -
Tpr5g1618 512 Pfam Serine carboxypeptidase 263 505 IPR001563 GO:0004185|GO:0006508
Tpr5g1618 512 Pfam Serine carboxypeptidase 69 235 IPR001563 GO:0004185|GO:0006508
Tpr5g1618 512 SUPERFAMILY alpha/beta-Hydrolases 57 510 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1618 Tpr-Chr5 31197284 31204739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1618 368 508 Calmodulin-binding Proteins AT2G22960 28.369 1.74e-16 75.9