Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1617 ATGGTGTTGCTTATCATTAACTCAACTATTAGTTTTATTGAGGAGAACAATGCCGGAAATGCTGCAGCTGCTTTGATGGCTGGTCTTGCCCCCAAAACCAAGGTGTTGAGGGATGGAAAATGGAGTGAGCAAGAGGCAGAAATTTTGGTACCTGGAGATGTGATCAGCATCAAGTTGGGAGACATTGTCCCAGCTGATGCGCGTCTCTTGGAAGGAGATCCCTTAAAAATTGACCAGTCTGCCCTCACTGGTGAGTCATTGCCAGTAACAAGGAACCCTGGTGATGAGGTCTTCTCTGGTTCAACTTGCAAACAAGGTGAAATTGAGGCTGTTGTCATTGCCACCGGTGTCCACACCTTCTTTGGTAAGGCTGCACACCTTGTAGACAGTACCAACAATGTTGGTCACTTCCAAAAGCACTGA 423 0.4681 MVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAEILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1617 140 Gene3D - 1 130 - -
Tpr5g1617 140 PANTHER CALCIUM-TRANSPORTING ATPASE 1 139 - -
Tpr5g1617 140 Pfam E1-E2 ATPase 30 138 - -
Tpr5g1617 140 PANTHER PLASMA MEMBRANE ATPASE 1 139 - -
Tpr5g1617 140 Gene3D - 31 115 - -
Tpr5g1617 140 SUPERFAMILY Calcium ATPase, transduction domain A 31 128 IPR008250 -
Tpr5g1617 140 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 2 122 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1617 Tpr-Chr5 31135112 31135778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1617 1 139 Primary Pumps ATPases AT3G42640 94.964 1.60e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1617 K01535 - mus:103969671 252.292