Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1612 ATGGCAAAAAACAAGAAACAAACCGTGAAACCTAAGAGAATCTTCTCTCGCAATGATGAAATAATTCTTCTCAATGGCCTCTTACAAATAAAATCTAAAAGAGGCATTGATCCGGCCAAAATATTAAGCAAGGTTTACAGCACCCATAAGTATTCTTTTAGCAACAAAACTATTAGAAAAAGGCAACTTAGTGATAAGATTCATAAACTTAAGAAGAAATATCAGGAAAATCTGACAATGAAAGAGCAAGGTTCTCTCATTTTCATTGATACTCATAAGGAGAAACTATTTGAACTTTCTAATGAGTTATGGGGAGTAGAAAATGGAGCAGTAGACAGGGAAATTGGAGCCGATGAAGGAGAACATGGAGATGATAATATGCATATGAATTTATTGAAGAGGGCGGAGTTGGATAAAAGATGTTTGGAGTTGAAAGTTCAAGAGGATCAACTGCGTCTCCAACGCTCGTTGTTACTTAAAGAGCAAGTTGATTTGATTTATAAGAGCCTGCTAGAGTCATCTGAGGTAGATAAGGAAAGTAGAGAAGCATGA 552 0.3587 MAKNKKQTVKPKRIFSRNDEIILLNGLLQIKSKRGIDPAKILSKVYSTHKYSFSNKTIRKRQLSDKIHKLKKKYQENLTMKEQGSLIFIDTHKEKLFELSNELWGVENGAVDREIGADEGEHGDDNMHMNLLKRAELDKRCLELKVQEDQLRLQRSLLLKEQVDLIYKSLLESSEVDKESREA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1612 183 Pfam Protein of unknown function, DUF573 12 105 IPR007592 GO:0006355
Tpr5g1612 183 PANTHER BNAANNG10740D PROTEIN-RELATED 8 168 IPR007592 GO:0006355
Tpr5g1612 183 Coils Coil 132 152 - -
Tpr5g1612 183 PANTHER STOREKEEPER PROTEIN 8 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1612 Tpr-Chr5 31048626 31049177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1612 12 112 GeBP Transcription Factor Family AT4G00390 33.663 1.69e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr5g1612 DUF573 7.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1612 - K02469 rcu:8267416 72.4034