Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1576 ATGGTCATGCTCTCACCCCATGCCTCCCCCAAAAATCTTTTCCCTCATTGGTTCATCTCTTCCTTATTCTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTTCACTCCAACCCTCAAATTCATTCATTCAAACTTCAACTTAACTTCTTCTAGCATGAGATCAAATCCTCTATCAACTTCATCACAATTACCCTTTTACCCTTCTTTCAACAATTACATGTTTTTCTCCAAACTTATGTTCCTTTTCATAACAAAAACCTTATTTTTATCCTTATTTTTTGTTCATGTCTTTTCTACTTGTAACCAACTAGACAAAGATTCTCTGTTGTCTTTCTCTTCAAAAATCTTAACTTTTTCACCTCACCCATCTCTTAATTGGTCTTCTTCATCTGATTGTTGTAATTGGGAAGGTATAATCTGTGATCAAAATAATCACCATGTTAAACAAATTTTGTTACATAATAGAGGTCTTAATGGTTTCATTGAGTTTTCTTTTATTACTTCACTTCAATCACTTTCTCATGTTAATCTTTCACATAATAAACTTCATGGTAATCTTCAAAATCAGTTTTTTTCACTTGTTAATCATGTATTAGTACTTGATTTGAGTTATAATCATTTCTATGGTGAATTACCTAGTAGTAATGGTAGTGGAAATGGAAATAACAGTGTTATTCAGGAATTAGATTTGTCTAGTAATTCATTCAATGGAACATTACCAGTTCCTTTGATTCAGATTCTTGCTGCAAAAGGGAATTTGATTTCTTTCAATGTTAGTAACAACACTTTCACAGGTCATATTCCAATTTCAAGCTTTTGTATTAATAATTCTGCTATAAGATTCTTGGATTTTTCATCCAATGATTTTGCTGGTGTTATTGATACTGGTTTAGGAGCATGTTCTAAGCTTGAGAGATTTAGAGCAGGTTTCAATTTTCTAACAGGGAATATACCGGTTGATATTTATGATGCTGTTTCACTAACAGAAATATCATTGCCACTTAATAGAATTAATGGAACAATTGATGATGGAATTGTTAACCTTGCAAATCTCACAGTTTTGGAGCTTTATTCGAATAATTTAACAGGTTCTATTCCTAAGGAAATTGGTAAACTTTCCAAATTGGAAAGGTTACTTCTTCATGTCAACAATTTGACAGGTTCAATTCCATCATCTTTGATGAATTGTCACAATCTTGTTGTGTTGAATTTAAGGGTCAATGATTTGGAAGGAAATCTTTCGGCGTTCAATTTCTCAGGACTTGGTAGACTTGTTACGCTTGATCTTGGTAACAATAGGTTTAGCGGTGTTTTACCGTCGAGCCTTTATGATTGTAAGTCACTTGCTGCATTAAGGCTTGCATCTAATAATCTTGTGGGACAGGTTTCATCTGAGATACTTGGACTTGAGTCTCTTTCGTTCTTATCGATTTCTACAAACATGTTGAAGAATATCACTGGTGCTCTAAGAATACTCACTGGCCTCAAGAAGCTTAGTACCCTTATGCTCTCCAAGAATTTTTACAATGAAACGTTACCGAATGATGAGAACTTGATAGGCCCTGATGGATTCCAAAAGATCCAAGTTTTAGGGTTAGGGGGTTGTAATTTCACAGGTCAAATACCAAGTTGGCTTAGAAAGCTGAAGAAGCTTGAGGCCGTGGACCTGTCCTATAATCTTTTAAGTGGTTCGATTCCTCCTTGGTTAGGTACACTTTCTGAACTTTTCTACATAGACCTGTCTGTTAACCTACTTACAGGCCCGTTTCCGATAGAACTTACGAAACTCCCAGCACTAGCATCACAACAAGCAAATGATAAAGTAGAAAGGACTTACTTGGAGTTACCTGTCTTTGCTAATGCTAACAATGTTTCTTTGTTGCAATACAATCAACTTTCAAGCCTTCCACCGGCAATTTATCTCGGAACCAATCACCTTAATGGCAGCATCCCGGTTGAGGTTGGCCAATTGAAAGTTCTTCATACGCTGGACCTGAAGTTAAACAACTTCTCTGGCAATATACCGGATCAATTTTCAAACTTGAAGAACTTAGAGACGCTAGACCTCTCGGGAAATCAACTATCAGGCGGAATTCCTGCTTCGCTCAATAATTTACATTTCCTGTCATTTTTCAGTGTAGCAAACAATAATCTTCAAGGTCAGATACCAACAGGTGGTCAGTTTAATACTTTTTCCAACTCCAGCTTTGAAGGAAATCCGCAATTGTGCGGTTCGGTTATTCAGCGCCCTTGTTCTTCTCAAAGAAATGCTACTAGTACTTCAGCTAGTGGCAAATCCAGCAAAAAAATAATAGTCACACTTATTATTGTTGTCAGTTTCGGCATAGCTACTATGGTAACATTGTTGACACTGTGGATACTCTCCAAGAGGAGGGTCAATCCAAGAGGAGATTCTGATAAGATTGAACTCGAATCAATTTCTCCGTACTCAAACAGCGGCGTTCATCCCGAGGTTGACAGAGAGGCTAGCCTAGTGGTATTGTTCCCCAACAAAAACAATGATACCAAGGATCTTTGCATATTAGAGATCATAAAAGCAACTGAAAATTTCAGCCAGGCAAATATAGTAGGATGTGGCGGTTTCGGTTTGGTTTATAAAGCAACCTTTCAAAATGGAACTAAGCTAGCCATCAAGAAACTTTCAGGAGATTTAGGCCTTATGGAAAGGGAATTTAAAGCTGAAGTTGAGGCTTTGTCAACAGCACAACATGAGAATCTGGTAGCATTGCAAGGCTACTGCGTGCATGATGGTTATCGACTACTCATATATAATTACATGGAGAATGGAAGTCTCGACTACTGGTTGCATGAAAAGCCCGACGGTTCGTCTCAACTCGATTGGCCGACTCGTTTGAAGATTGCACAAGGAGCAAGTTGTGGTTTGGCCTATTTGCATATGACATGTGAACCGCACATTGTACACCGTGACATAAAATCAAGTAATATACTCCTTAACGAGAAGTTTGAGGCACATGTTGCTGATTTTGGGTTGTCGCGATTGATTCTTCCGTATGAAACCCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCTCCAGAGTATGGACAAGCATGGGTGGCTACTCTAAGAGGTGACGTGTACAGCTTTGGAGTTGTTTTGCTTGAGCTTCTCACTGGAAGAAGACCTATGGATGTATGCAAACCGAAAATTTCAAGGGAATTGGTTGGCTGGGTTCAACAGATGAAAATTGAAGGAAAACAAGAACAAGTATTTGACTCGAATCTACGAGGGAAAGGATTTGAAGGAGAGATGCTATACGTACTTGATGTGGCATGCATGTGTGTAAACATGAATCCTTTCAAGAGACCACGCATCAGAGAAGTTGTTGAATGGTTAAAAAATGTTGGATCAGAAAACCAGCTCAGAAATAACGATTAA 3438 0.3778 MVMLSPHASPKNLFPHWFISSLFFPSSSSSSSSSSSFFTPTLKFIHSNFNLTSSSMRSNPLSTSSQLPFYPSFNNYMFFSKLMFLFITKTLFLSLFFVHVFSTCNQLDKDSLLSFSSKILTFSPHPSLNWSSSSDCCNWEGIICDQNNHHVKQILLHNRGLNGFIEFSFITSLQSLSHVNLSHNKLHGNLQNQFFSLVNHVLVLDLSYNHFYGELPSSNGSGNGNNSVIQELDLSSNSFNGTLPVPLIQILAAKGNLISFNVSNNTFTGHIPISSFCINNSAIRFLDFSSNDFAGVIDTGLGACSKLERFRAGFNFLTGNIPVDIYDAVSLTEISLPLNRINGTIDDGIVNLANLTVLELYSNNLTGSIPKEIGKLSKLERLLLHVNNLTGSIPSSLMNCHNLVVLNLRVNDLEGNLSAFNFSGLGRLVTLDLGNNRFSGVLPSSLYDCKSLAALRLASNNLVGQVSSEILGLESLSFLSISTNMLKNITGALRILTGLKKLSTLMLSKNFYNETLPNDENLIGPDGFQKIQVLGLGGCNFTGQIPSWLRKLKKLEAVDLSYNLLSGSIPPWLGTLSELFYIDLSVNLLTGPFPIELTKLPALASQQANDKVERTYLELPVFANANNVSLLQYNQLSSLPPAIYLGTNHLNGSIPVEVGQLKVLHTLDLKLNNFSGNIPDQFSNLKNLETLDLSGNQLSGGIPASLNNLHFLSFFSVANNNLQGQIPTGGQFNTFSNSSFEGNPQLCGSVIQRPCSSQRNATSTSASGKSSKKIIVTLIIVVSFGIATMVTLLTLWILSKRRVNPRGDSDKIELESISPYSNSGVHPEVDREASLVVLFPNKNNDTKDLCILEIIKATENFSQANIVGCGGFGLVYKATFQNGTKLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGYRLLIYNYMENGSLDYWLHEKPDGSSQLDWPTRLKIAQGASCGLAYLHMTCEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYETHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVLLELLTGRRPMDVCKPKISRELVGWVQQMKIEGKQEQVFDSNLRGKGFEGEMLYVLDVACMCVNMNPFKRPRIREVVEWLKNVGSENQLRNND* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1576 1145 Gene3D Ribonuclease Inhibitor 104 397 IPR032675 -
Tpr5g1576 1145 Pfam Leucine rich repeat N-terminal domain 108 145 IPR013210 -
Tpr5g1576 1145 ProSitePatterns Protein kinases ATP-binding region signature. 867 890 IPR017441 GO:0005524
Tpr5g1576 1145 Gene3D Ribonuclease Inhibitor 402 764 IPR032675 -
Tpr5g1576 1145 SUPERFAMILY Protein kinase-like (PK-like) 849 1132 IPR011009 -
Tpr5g1576 1145 Gene3D Phosphorylase Kinase; domain 1 828 936 - -
Tpr5g1576 1145 PRINTS Leucine-rich repeat signature 428 441 - -
Tpr5g1576 1145 PRINTS Leucine-rich repeat signature 685 698 - -
Tpr5g1576 1145 PANTHER LEUCINE RICH REPEAT KINASE 2 84 1136 - -
Tpr5g1576 1145 Gene3D Transferase(Phosphotransferase) domain 1 937 1145 - -
Tpr5g1576 1145 SMART LRR_typ_2 685 709 IPR003591 -
Tpr5g1576 1145 SMART LRR_typ_2 552 576 IPR003591 -
Tpr5g1576 1145 SMART LRR_typ_2 352 376 IPR003591 -
Tpr5g1576 1145 SMART LRR_typ_2 173 197 IPR003591 -
Tpr5g1576 1145 SMART LRR_typ_2 473 495 IPR003591 -
Tpr5g1576 1145 SMART LRR_typ_2 425 448 IPR003591 -
Tpr5g1576 1145 SUPERFAMILY L domain-like 256 604 - -
Tpr5g1576 1145 ProSiteProfiles Protein kinase domain profile. 861 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1576 1145 PANTHER OS06G0692500 PROTEIN 84 1136 - -
Tpr5g1576 1145 Pfam Protein tyrosine and serine/threonine kinase 865 1130 IPR001245 GO:0004672|GO:0006468
Tpr5g1576 1145 SUPERFAMILY L domain-like 103 336 - -
Tpr5g1576 1145 SMART serkin_6 861 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1576 1145 SUPERFAMILY L domain-like 528 752 - -
Tpr5g1576 1145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 983 995 IPR008271 GO:0004672|GO:0006468
Tpr5g1576 1145 ProSiteProfiles Leucine-rich repeat profile. 687 710 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1576 Tpr-Chr5 30248640 30252316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1576 79 759 Miscellaneous Gene Families AT1G17240 52.624 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tpr5g1576 PK_Tyr_Ser-Thr 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1576 - - gmx:100781943 1593.94