Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1564 ATGTTTAATGTTGTTGTCTTCATGACATCTTTTGTTACAATCATTTTTCAACTTCTTTTGTTCTTTCCTTTAACATCTTCCTTAGTTGAACCATCTTTGCTTCAAAAAAATTCATGCAATGAAACATGTGGAAAACTCCATATACCTTTTCCATTCTACATAAACAACACTTCATGTTCATCACTCTCAACTTCTTTCCACCTAACTTGTTCAAATTCATCCACCCTTTTGATCAAAATAGGTTCACAAAACTATCCCATTTTAGAATTCTTTTCAGATGGTTTATTAGTAGACTTTCCCGGAACATCATCATGTCGCCAATACAACGATTTGAATTCATTCGGCGAGAGGTTTTTCGATGGAAAAAACTACTTTGGTGTATCAGTTGATAATGTTGTTGGTCTATATGATTGTGAAGATTCTTCACTTTGTAAAGCTGATTGTGAAACAGTTAATCTTCCTGGTTGTGATGGAAGTGTTGGTGGTGGTTCTCTTGGATGTTGTTATCCACTTTCTGATCATACTATATGGCATATTGGTGAAGGTTTTTCTGTCTTTTCAAAATTTGGATGTAGGGGATTTTCTAGTTGGACTGTTTTAAGAGGTTCTTATTCAGGTAAAAGAGGGGTAAAATTGGAATTTGGTATTCCTAGGAACTTATCTAAGGAGATTTGTGCTAAGAATGCAGATATGGTGAATGCTACATCAATTAAAGGTGGTGTAAGATGTGTTTGTGAAGATGGATATGTTGGTGATGGTTTTGCTAATGGAACTGGATGCTTATTTTCATGTATCAAAAATGGAAAGGAAGCATATGGAAGTGATTGCTACATCAAAAGACATGATCAAAGAAAAATGGTCATCATTGCTGGAATCCTTTGTCCAATTCTTATTGTTGCATCCTTAGTTGCACTATTCTATCTTCTAAAAAGAAAACAAAAGCCAGGAATGTTCGATTCCGAACAAGCATATTACCACAACATTTCATTCCGAAAAGCATGTAGAACGCGACTTTTCAGCCACCATGAGCTAGAAGAAGCCACCAATGGTTTTGAAGATAGCCGAAAACTCATGCAATGCAATAACAGCACAATTTTTGCTGGTGTTATTGGTGATGGATCACATGTAGCTATACACAAGTTATCGAAATGCGAGAACGATAAAGATATGATGCAAGTCATGTCACAAATTGAAGTCCTATCTTCTATTGTGCATAGAAATGTTGCATCAATCATTGGTTGTTGCATTGATTCTAACTACATTCCTTTAGTTGTTTATGAATATCCTGCAAATGGTACCTTGGAGGATCATTTACACCAAAACAAAGGGCAAAAATGGCAAAAAAATGGTTTTTTAGATTGGTATAGAAGATTGAATATTGCAACAGAAATAGCTAGTACTATTGCATTGTTACATTATGATAAATCACCTCCAATATTTCATCATAACCTAAAGTCTAGTTGCATATTCCTAGATGATGATTTTTCAGTCAAGATTGCAGGATTTGGAATACTTAACTATGATCACATGAATTACGAAAATCGCGAACGCTTTCGCTTGTGCAAAAACGATGTCTATGACATAGGTGTGTTACTACTTGAGATAATCTATGGATCAAATCAAATGGACTCACCTACATTAGCCTTGAAGAAAATAAGAGACGGAAAGATTGAAGAAATCGTTGATCCGGTTCTTAATTATCACGAACAACCGCGGACATGTCAAGAACAGATACTTATCTTTGCTGATCTTGCAACAAGATGTTTGCTATTTAGTGGAGATGGAAAAATGGGAATGATTGATGTTGCTAGAGAATTGGTTCATTTGAGTAAAGATAGTGTTGATGGTGGAAATGTGACAGGACTTGTTCTTGAAGAAACATTCTCAAATTCAAGTCTTCTTCAAATGATATCTTTGTCTCCTGATTCTATGAATGTTCCTTGA 1944 0.3508 MFNVVVFMTSFVTIIFQLLLFFPLTSSLVEPSLLQKNSCNETCGKLHIPFPFYINNTSCSSLSTSFHLTCSNSSTLLIKIGSQNYPILEFFSDGLLVDFPGTSSCRQYNDLNSFGERFFDGKNYFGVSVDNVVGLYDCEDSSLCKADCETVNLPGCDGSVGGGSLGCCYPLSDHTIWHIGEGFSVFSKFGCRGFSSWTVLRGSYSGKRGVKLEFGIPRNLSKEICAKNADMVNATSIKGGVRCVCEDGYVGDGFANGTGCLFSCIKNGKEAYGSDCYIKRHDQRKMVIIAGILCPILIVASLVALFYLLKRKQKPGMFDSEQAYYHNISFRKACRTRLFSHHELEEATNGFEDSRKLMQCNNSTIFAGVIGDGSHVAIHKLSKCENDKDMMQVMSQIEVLSSIVHRNVASIIGCCIDSNYIPLVVYEYPANGTLEDHLHQNKGQKWQKNGFLDWYRRLNIATEIASTIALLHYDKSPPIFHHNLKSSCIFLDDDFSVKIAGFGILNYDHMNYENRERFRLCKNDVYDIGVLLLEIIYGSNQMDSPTLALKKIRDGKIEEIVDPVLNYHEQPRTCQEQILIFADLATRCLLFSGDGKMGMIDVARELVHLSKDSVDGGNVTGLVLEETFSNSSLLQMISLSPDSMNVP* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1564 647 Gene3D Transferase(Phosphotransferase) domain 1 430 619 - -
Tpr5g1564 647 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 48 642 IPR045274 GO:0007166
Tpr5g1564 647 SUPERFAMILY Protein kinase-like (PK-like) 334 606 IPR011009 -
Tpr5g1564 647 ProSiteProfiles Protein kinase domain profile. 351 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1564 647 Pfam Wall-associated receptor kinase galacturonan-binding 39 90 IPR025287 GO:0030247
Tpr5g1564 647 Pfam Protein tyrosine and serine/threonine kinase 356 512 IPR001245 GO:0004672|GO:0006468
Tpr5g1564 647 PANTHER OS10G0351500 PROTEIN 48 642 - -
Tpr5g1564 647 Gene3D Phosphorylase Kinase; domain 1 322 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1564 Tpr-Chr5 30053205 30056479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1564 39 609 Receptor kinase-like Gene Family AT2G23450 28.502 9.59e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Tpr5g1564 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1564 - - vra:106760020 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1564 5 30053205 30056479 Tpr5g1564 5 30053205 30056479 ECH