Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1563 ATGATGGATTTGGTAGGACCCACCATGACCAGATTGGTCGGGGATTACATATTGGGTCCTAAAATTGGGTCAGGTTCATTTGCAGTTGTGTGGCGTTCTCGTCATAGAAATTCAGGTTTGGTTGTAGCAATTAAGGAAATTGATAAGACCCAATTGAGTCCTAAAGTTAGAGATAATCTTATCAAAGAAATTTCAATTCTTAGTACTATTCATCATCCTAATATCATTCAACTCTTTGAAGTAATCCAGACAAATGATAGGATTTACCTTGTTTTGGAGTATTGTGGTGGAGGGGACCTTTCTGCTTACATTAATCGGTATGGAAGAGTTTCTGAATCCGTTGCTCGACATTTCATGAGGCAATTGGCCGCTGGGTTGCAAGTACTTCAAGAAAAGAACCTCATACATCGTGATTTAAAACCACAGAACTTACTGTTGGCAGCTACATCAGCGACGCCACTTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTCACACCTCTGCAGTTGGCTGATACACTATGTGGTTCACCTTATTACATGGCTCCTGAGATAATTCAGAGTCAGAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAGCTAGTTGTTGGGAAACCACCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCTACGGAACTGCATTTTCCACCAACGATTTTAAAAGAGATACATCCTGATTGTGTGGATCTTTGCAGAAGCCTTTTACGTCGAAATCCAGATGAGAGATTAACATTCAAGGCATTCTTCAATCACAACTTCCTACAGGAGCACAGGTCGGGCATGGATATTGAGCAGTTTCATTCATATCAATCAGAAACCTCAATGATTAATCAAGCACATTTTGAGTATCATGCCGAGACTTTTGTAGATGATCCGGTGGTAGTCAGTTCAGCAGTCAATGAGACCATGCTTTTGCAAAAAAAAGGTGGCGAGATCACAGCTGATGGTGACACTAAGAATGCTGCAGGTTTGACTCCAACTATTGCACTCGATAAGCCGGGAAAGTCCATTCATACTGACACTCATTTGTCAAACCAAGCTCAAGTTTCTCATTTAATGGAGTCCATTGAGAAAGGTTATGTCCTCATCAATTCTCATTTTGCATCATTGGAGGATTTCTCTGTCTACTTTGAGGCATCCATGCAAGAAAATCCCGCAAGCGGCATTTCTATCTCCCCTTCAAAGCGAACTAGCCTGGAAATTAGAAAGCAAACTGAGGATCTGCCGTCTTCCTCCACTGCCGGGTTAGACAATTTTAAAAGCAATGAACTTGAGGAATTTGTAGCATCCTTTGAATTTGCTACCTTAAAGAAAGAGAGGGAATTTTCTCTACTGCACCCTTCAAACAGGTTAGAGTTGTTACATCGGTATGTTCAAGTCCTTGGAGAACTTTCGCAAGAAAAGTATAACACAGGATTGTATCTAGAATCGCTTGCGGTTGAGTTGGTGGTTTTAGCTATATGGAAGAAAACTCTAGACATTTGTAGCACTTGGTTAGACCCCATTTCTGAGGGTGAGTTGCCTCGAAGCAGTTCAGTTAACGAGTCCATAATTGCCTGTGGAGACACGAGCTTATCACAGACTATGGAACGAATAAATTTTAGTGACCGTCTTTCCGCTTCCTTGTGGGCCAAACGTGGATTTATTATTGCAGTTGATCGTGCTGAGAAACTATCATCTCATATTCAAAACATGGATGGTACAGTTGAGATGCCAGATGCAGTGGAGATTATATTCCAAGAAGCACTCTTAATTGGGACAAATGGTGCAGTAGATGAGTATATGAATAACAAAGATAAGTCGGCTGCATCTTACTCAAAAGCAATGCTTCTACTTTCATTTATTGTGGGAGAAGCAGAGAACCTTCCACTGAACCCTCCATTTTCACTTCTAGCCGATGGTCAGAAGCGAATCATGCAATATATTCGCAACTTGCAGTTTCGCAAAAAGTCTTTGTCAGAGTCCGCTTCAAAGGAATGA 2040 0.4088 MMDLVGPTMTRLVGDYILGPKIGSGSFAVVWRSRHRNSGLVVAIKEIDKTQLSPKVRDNLIKEISILSTIHHPNIIQLFEVIQTNDRIYLVLEYCGGGDLSAYINRYGRVSESVARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLAATSATPLMKIGDFGFARSLTPLQLADTLCGSPYYMAPEIIQSQKYDAKADLWSVGAILYQLVVGKPPFDGNSQLQLFQNILASTELHFPPTILKEIHPDCVDLCRSLLRRNPDERLTFKAFFNHNFLQEHRSGMDIEQFHSYQSETSMINQAHFEYHAETFVDDPVVVSSAVNETMLLQKKGGEITADGDTKNAAGLTPTIALDKPGKSIHTDTHLSNQAQVSHLMESIEKGYVLINSHFASLEDFSVYFEASMQENPASGISISPSKRTSLEIRKQTEDLPSSSTAGLDNFKSNELEEFVASFEFATLKKEREFSLLHPSNRLELLHRYVQVLGELSQEKYNTGLYLESLAVELVVLAIWKKTLDICSTWLDPISEGELPRSSSVNESIIACGDTSLSQTMERINFSDRLSASLWAKRGFIIAVDRAEKLSSHIQNMDGTVEMPDAVEIIFQEALLIGTNGAVDEYMNNKDKSAASYSKAMLLLSFIVGEAENLPLNPPFSLLADGQKRIMQYIRNLQFRKKSLSESASKE* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1563 679 SUPERFAMILY Protein kinase-like (PK-like) 12 312 IPR011009 -
Tpr5g1563 679 CDD STKc_ATG1_ULK_like 22 273 - -
Tpr5g1563 679 PANTHER BNAC06G18300D PROTEIN 460 662 - -
Tpr5g1563 679 PANTHER BNAC06G18300D PROTEIN 10 303 - -
Tpr5g1563 679 Gene3D Transferase(Phosphotransferase) domain 1 8 333 - -
Tpr5g1563 679 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1563 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Tpr5g1563 679 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 460 662 IPR045269 GO:0004674|GO:0006914
Tpr5g1563 679 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 10 303 IPR045269 GO:0004674|GO:0006914
Tpr5g1563 679 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1563 679 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1563 679 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1563 Tpr-Chr5 30035678 30041278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1563 6 296 CBL-interacting serine-threonine protein kinases AT2G30360 34.007 7.43e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Tpr5g1563 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1563 - K08269 mtr:MTR_8g024100 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1563 5 30035678 30041278 Tpr5g1563 5 30035678 30041278 ECH