Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1560 ATGTATATGCCAGAATATGCATTTGGTGAGAGTGGAAAACCTTCATCAGGAGATGATGTTGTTGTGCCTCCCAATGCTTCGCTCCAAATGGATCTTGGGTTAGTCTCGTGGAGGATTGTATCTGACATTACTAAGGATAGGAAGGTCCTTAAGAAGATCTTAAAGGAAGGAGAGGGAAATGAAAGACCAAATGATGGAGCTATGGTTCTAGGTACAGTTTTGCTAATAAAAACTTTTAAAGGTTTTTGTACTTTGATTTCATTTGTAAAGGTGAGAATATTATGTCTTCATTTTCTTTAG 300 0.37 MYMPEYAFGESGKPSSGDDVVVPPNASLQMDLGLVSWRIVSDITKDRKVLKKILKEGEGNERPNDGAMVLGTVLLIKTFKGFCTLISFVKVRILCLHFL* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1560 99 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 69 - -
Tpr5g1560 99 PANTHER PEPTIDYLPROLYL ISOMERASE 4 69 - -
Tpr5g1560 99 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 38 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1560 Tpr-Chr5 29927387 29928343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1560 5 70 Calmodulin-binding Proteins AT3G25230 48.485 1.70e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1560 K09571 - gmx:100819747 110.538