Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1559 ATGGAAAGTTTCCTCTGTGATTTGGCGAAGCCATATGTGGAGAAATTGATTAATGGGGCAATAGCAGAAGCACGTCATGTATTATGCTTCACATGTACTGTTAAGGAATTTGAAGAAGAAAGAGCTAGCTTGGAACCAGAAAGAAAAACTATCGAGCAACTTGTCAAAGATGCAAGAGAAAGAAATAAAGATATTAAAGCTAATGTTGTTTCTTGGGCAGAGGAAATTGATAAGCTCAATCAAGTGGACACAAAAACAAAACAAACATGTTTTTTTGGATTTTGTCCTGATTGCATATGGCGATATAAAAAGGGAAAGGAGTTGACAAATAAAGTGAAGAGAATCCAAGAACTAAAAGTAAAGGGAGAGAAACTTGAAATTGAAAATATTGAACTTTCTCACCGTCTTCCAGGTGTTGAACGTTATTCATTCAAAGATTACATTTCTTTTAAAACCAGAGAGGAAAAATACAAAGAACTGTTGGATGCTCTAAAAGATGACAACAACTATATCACCGGATTGCATGGAATGGGGGGCACCGGAAAGACTACATTGGCCAGAAAAGTGGGTAATGACCTTGAGCAATCTAAACATTTTGCTTATGTCGTTGATACGACCGTGTCGTTTACTCCTGATGTAAAAAAGATTCAAGATGATATTGCTGGACCTCTAGGATTGAAATGGGAGGATTGTAATGAATCAGACCGGCACAAAAAACTATGGAGCAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCAAGGCCCACCACTTGATTTTGAGGCAATAGGAATTCCAAAACAGGGCAATCACGAAGGTTGTAGAGTTCTTGTAACCTCACGTAGTAAACAAACTTTTAACAAAATGGATTGTGATAAGATTAAGATAATTGAATTGTATCTTTTATCCAAAGAAGAAGCTTGGATCATGTTCAAAAGGTATGCCGGGATAGATGATAGCTGCCCAAAAAAACTGATTGATAAGGGACATAAAATTGCAAATGAATGCAAACAGTTACCAATTGCAATTTCAGTCATCGCCAGCAGTTTAAAGGGCCAATTCCAACAAAATCGAGAGCATGAGTTGGATGTGACATTGAATTCCTTGAAGAAGCCTGTATCCATGCATGGTGTTGATGACGATATGGTTGGAATTTATAAATGTTTGAAGTTTAGCTATGATAATTTGAAGAAAGAAACATTCAAGGGGTTGTTCCTCTTATGTTCGGTTTTCAGAGAAGATGAAGAATATTCTATTAAAGTTCTAACCAGACTTTCAATAGGAGTGGGTCTTTTTGGGGAAGATTGTGACACTTATAATGAAGCTCGAAACCAAGTAGTTCAAGCCAAAACCAAGCTTGTAGATTCTTGTTTGTTGTTGGAGGTCAATAAAAAACGGCTAAAAATGCATGATTTGGTTCGTGGTGCAGCCCAATGGATAGGGAACAATGAGATTCAATGTGTAAAATTGTTTGATAAAAAGCAAAAGTCATTGGTTGAAAATCAGAAAAATATCAAACATTTATTATGTGAAGGGAAGTACATGGATTTTTTTAACTTGAAATTTGATGGTTCCAAACTTGTGACTTTAATTGTCAAGGTGGATGGAGAAGAAGAGGATGAATGCATAAAAGTTCCAAATTCTTTCTTTAAAAATGTTACCAATCTTCGTGTTTTGCATTTTTCAAGCAATTACCAACAACCTTTATCATTATCAGATTCAATTCAGCCATTGACCAATATTCGATCTGTGTTGGTTGATAATGTGGATTTAGGTGACATCTCTATTTTGGGAAACCTACAATGTCTGGAGACTCTTGATTTGGTTGAATGCACAATCAATGAATTGCCAGACCAAATTACAGAACTGAGGAAGTTTAAATTGTTGAAGTTGAAATATTGTAAAATTAGAAAGAATAATCCATTTGAAGTTATTAAAAGATGCTCATCACTTGAAGAGTTGTATTTCAAATATAGTTCCAATGATTTTTGTAAGGAAATAACCTTACCTGAGTTGCAAAGTTATCGAATCTATTATGGTGTTGGAAGTCTCTTTTCTACGGAGAGAAGTTTAGGATTTCTCAAATCTGTTGTGTTTTATGGTAATGGAAAGTGTCAATTTTCAGAAGAAACACTCAAGTACTGCATGCAAACAGCAGATTGTCTTTGGCTACAAGAAATTAAGGGGGAATGGAGAAATCTCATGCCTGAGATTGTTCCTGTAGATCTTGGTATGAATGATCTTGTTGACCTTCGTTTACGTAGCATTTCACAACTTCGGTGCCTGATCGACACCATTGGTTCTCAAAAACCAAATGTCTTGTCCAACTTGGTTGTACTAGAACTGAAAGGAATGGAACATTTGCAAATCTTGTTTAAAGGTAAGCTAAACCTCTGCTATCTGAAGACCATCAAACTTGAGAATTGCCCTATGTTAGTTTCCCTATTTGAAGTGTCAACTTCTCTAAGCCTAGTTCTACTAGAGACATTGAAAATAGCTAACTGTGAGGGACTGAAAACCATAACAGCAAATGAAAGAAGAGAGGATGAAGAAATAGATGACGGTGGTAATAATAAGAGTCATGGTTCAGTGTTTTCGAAACTGAAAGTTATTGATGTTAGGAGATGTCACCTATTAGAATCTGTACTACCTTTCCTCTCTGCTCAAGGCCTTCCAGTACTAGAAACTATCAGAATAAGAAAATGTGATGGATTGAAATATGTGTTTGGCAAATCTCAACATGTTGACCTAATTTCACTAAGTCAATTGGAGCTCTCTGAATTACCAAACTTCATTGATATTTTTGAAGAATGTAAACATCCCATGTCTTCATGTGTGAATGGATCATCTTCCACTTCCAAAGCAGAAATACAATTGGATCCTATCAAAAGCAATACCTTTTCTTGGTGGACTCGTATATGTTGCCATACCACAATCCCATTGGTTGATGTTGATAGGGATCAACCGCATGAATACTTGGTGGCATCGGAATCAAATTCACATCGCCTTAATAAATGGGAACATGCTCAATATATTCCAATACAATCAAGCATGCTTTGCAATATTAAAGAGATTGTACTGACTCACTTCTCCAAGATGAAATCAGTAATTAACCTATCTTTTGTTCCAATAATGTTGTTGGAAACTCTGAGAATTAGGAAATGTGATGAACTAAGGCACATAATAGTTGACGTTGGAGATCATAACACTGGTGGCAACAACTGGGTCAATATTTTCCCAAAATTGAAAAAGCTCAGTGTTAAAGATTGCGCTCTATTGGAATACATATTTGGACCTGGGGCTGAGACTAATGATCATCACCACCACATGGAGGTTGAACTTCATTTTCCGGAATTGACACAGCTCGAACTTCTGAATCTGCCAAGTTTAATCGACATGTGTCCCAAACAATATCAAACAACATTTCCTTCTTTGGAAAATCTCGAACTCAAGAAATGTTCCCAGGTTGATATCAAATCTATTGGTGATTTCATTATTCATTCAATTTCAGAATCTCTGGATAATACAATCATTAAGGATGCACGGCAACTGGAGATAACTTTGCAAGACATTAAGTTGTATGACCTGCCTATGATGACTTGTCTTTTTGTGGGTCCCAAAAATTCAGTTGCCCTCAAAAACCTTACAGACATAAGAATTGTGCGATGTGACTTATTGAAAATTGCATTCTCCACTTCCATTTTAAGATTTCTACCACTGTTGCTTTATTTAAGAATTGAAGAATGCAAAGAGTTAGAATATATTATTGAAGATGATTTGGAGAATAAAAAAAAATCAAATTCCTTGTCTTCAACAACATGCTTCCCAAAGCTAAAAGTACTTGCTGTTATAAAGTGCAACAAGTTGAAATTTGTCCTTCCATTCTCTGTATGTAAAGAGCTTCCGAAGCTAAATGTTCTGTTGATAACAGAAGCAAATGAGTTGGAAGAAATATTCAAAAGTGAAGATGATCAGAAAGTTGATATTCCAAATCTAAAAATTGTAGCATTTGATATGCTACCAAGCCTCCGTAATACCCAAGGAAATCAATTTCAGGCTGTGAAAACTCGCTTTGTGCGGGAGTGTAAAAAACTCACTCTGACTTCAGTATTAACAGTCACTAGCTTCAACAAATTTATGAGTTTAATACCTGGTTTTAAGCTCTCAAATCAAGACTATGACTTGTATATGGATTTGTGGATGAAATTACGAGTGATGGCAACAAATTCAAAAGGTATTGAGATAGAAGGAACTTCTAAGACTAACAATGATCAAGTTTCTCGAAATGATGTTGCTTTCATGAAAGTGACCTCAAATGTTGAGGAACAATTTTCTATTCCGTCTCGGTTCCCTTCAACACATTCTAAAGGGGGCCCTTCTCAAAAAGTAGAAGATTTAAGTTCATCTTTGCTTGTCAAGAGGGAGCTTGAGGAACTGGTCTCCAAGAATCATTTGGATTATCAGAACTTGCCTTTATTAACTGATTTTCTTGTTAAGAATCCTTCTGTTCATTTAAAGGACACTTCACTTCCTAATAGATACAAGGGTTGTGCCTACAACTTACTGGCCGAGCTATTGAAATTCCTCGAAACCCATAGTTTGGTTGAAGTATCGGGCTCACGCCACTCTGAATTTGTGGAGCTATTACAAGATGCGCGCTACTTTGCTTTTGATAAGGAATGGTTGGATGGTGTTGAGAGGCGTGCTTTATTTCCAGAAATACAAGTATCTCCAGATGCTTTGGAAAAATTATTGCATTCCAAGAAACAGGTTACCAAGGATGTTGAAGATTTGCGTTTCAAGATACACATTTTAAGTCAACATGTGGAAGATCATAAGCATCAATTGATATCCTCTGAAGCTGTTTTGGAGAGTATCATTCAACAAGAAGCGGTTCTAAGTGCCCCTATTGGCTATTAG 4938 0.3623 MESFLCDLAKPYVEKLINGAIAEARHVLCFTCTVKEFEEERASLEPERKTIEQLVKDARERNKDIKANVVSWAEEIDKLNQVDTKTKQTCFFGFCPDCIWRYKKGKELTNKVKRIQELKVKGEKLEIENIELSHRLPGVERYSFKDYISFKTREEKYKELLDALKDDNNYITGLHGMGGTGKTTLARKVGNDLEQSKHFAYVVDTTVSFTPDVKKIQDDIAGPLGLKWEDCNESDRHKKLWSRLTNGDKILVILDDVWDQGPPLDFEAIGIPKQGNHEGCRVLVTSRSKQTFNKMDCDKIKIIELYLLSKEEAWIMFKRYAGIDDSCPKKLIDKGHKIANECKQLPIAISVIASSLKGQFQQNREHELDVTLNSLKKPVSMHGVDDDMVGIYKCLKFSYDNLKKETFKGLFLLCSVFREDEEYSIKVLTRLSIGVGLFGEDCDTYNEARNQVVQAKTKLVDSCLLLEVNKKRLKMHDLVRGAAQWIGNNEIQCVKLFDKKQKSLVENQKNIKHLLCEGKYMDFFNLKFDGSKLVTLIVKVDGEEEDECIKVPNSFFKNVTNLRVLHFSSNYQQPLSLSDSIQPLTNIRSVLVDNVDLGDISILGNLQCLETLDLVECTINELPDQITELRKFKLLKLKYCKIRKNNPFEVIKRCSSLEELYFKYSSNDFCKEITLPELQSYRIYYGVGSLFSTERSLGFLKSVVFYGNGKCQFSEETLKYCMQTADCLWLQEIKGEWRNLMPEIVPVDLGMNDLVDLRLRSISQLRCLIDTIGSQKPNVLSNLVVLELKGMEHLQILFKGKLNLCYLKTIKLENCPMLVSLFEVSTSLSLVLLETLKIANCEGLKTITANERREDEEIDDGGNNKSHGSVFSKLKVIDVRRCHLLESVLPFLSAQGLPVLETIRIRKCDGLKYVFGKSQHVDLISLSQLELSELPNFIDIFEECKHPMSSCVNGSSSTSKAEIQLDPIKSNTFSWWTRICCHTTIPLVDVDRDQPHEYLVASESNSHRLNKWEHAQYIPIQSSMLCNIKEIVLTHFSKMKSVINLSFVPIMLLETLRIRKCDELRHIIVDVGDHNTGGNNWVNIFPKLKKLSVKDCALLEYIFGPGAETNDHHHHMEVELHFPELTQLELLNLPSLIDMCPKQYQTTFPSLENLELKKCSQVDIKSIGDFIIHSISESLDNTIIKDARQLEITLQDIKLYDLPMMTCLFVGPKNSVALKNLTDIRIVRCDLLKIAFSTSILRFLPLLLYLRIEECKELEYIIEDDLENKKKSNSLSSTTCFPKLKVLAVIKCNKLKFVLPFSVCKELPKLNVLLITEANELEEIFKSEDDQKVDIPNLKIVAFDMLPSLRNTQGNQFQAVKTRFVRECKKLTLTSVLTVTSFNKFMSLIPGFKLSNQDYDLYMDLWMKLRVMATNSKGIEIEGTSKTNNDQVSRNDVAFMKVTSNVEEQFSIPSRFPSTHSKGGPSQKVEDLSSSLLVKRELEELVSKNHLDYQNLPLLTDFLVKNPSVHLKDTSLPNRYKGCAYNLLAELLKFLETHSLVEVSGSRHSEFVELLQDARYFAFDKEWLDGVERRALFPEIQVSPDALEKLLHSKKQVTKDVEDLRFKIHILSQHVEDHKHQLISSEAVLESIIQQEAVLSAPIGY* 1646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1559 1645 Pfam NB-ARC domain 156 401 IPR002182 GO:0043531
Tpr5g1559 1645 Gene3D Ribonuclease Inhibitor 471 681 IPR032675 -
Tpr5g1559 1645 PANTHER - 1144 1340 - -
Tpr5g1559 1645 PANTHER - 56 943 - -
Tpr5g1559 1645 SUPERFAMILY RNI-like 1023 1162 - -
Tpr5g1559 1645 Gene3D - 307 403 IPR042197 -
Tpr5g1559 1645 Coils Coil 48 75 - -
Tpr5g1559 1645 PRINTS Disease resistance protein signature 171 186 - -
Tpr5g1559 1645 PRINTS Disease resistance protein signature 244 258 - -
Tpr5g1559 1645 PRINTS Disease resistance protein signature 342 356 - -
Tpr5g1559 1645 PRINTS Disease resistance protein signature 778 794 - -
Tpr5g1559 1645 Gene3D Ribonuclease Inhibitor 695 859 IPR032675 -
Tpr5g1559 1645 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1144 1340 - -
Tpr5g1559 1645 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 56 943 - -
Tpr5g1559 1645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 414 IPR027417 -
Tpr5g1559 1645 Gene3D Ribonuclease Inhibitor 1002 1404 IPR032675 -
Tpr5g1559 1645 Coils Coil 108 135 - -
Tpr5g1559 1645 Gene3D - 139 303 IPR027417 -
Tpr5g1559 1645 SUPERFAMILY L domain-like 474 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1559 Tpr-Chr5 29890284 29922404 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1559 173 529 WRKY Transcription Factor Family AT5G45050 24.935 8.17e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1559 - - mtr:MTR_3g062420 1441.02