Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1557 ATGTCTCTTTCACTAGAAACGAACGGTGAAGTAAATCACCTTACACAAGGAGATGTCCAAAATGAGGATGGCATAGTTTTTGCTTTGTCCTTGATTACTTCTATAACGCTTCCATTGACCGTCCGGTCTGCAGTTGAGCTTGGCATCTTCGATATCTTAAACAAAGCAGGAAAAGATGTCAAGCTCTCTGCAGACGATATCGCAATTAAGATTGGATCAAAGAATCCAGAAGCACCCACAATGTTGGACCGTCTTTTAAAGTTATTGACTTGTCACTCTCTTTTATATTGCTCACTTTCTGAAAATCAAGAAGGGCGTACGTCTCCTCAGAGACTCTATAGCCTTGCCCCTCTCTCTAAGTATTTTGTGACGGATGTTGATGGTGTTTCATTTGGATCAATAGTAAACTTAGCTTTGGACAAAGTTTACTTGGGAAGCTGGACCGAAATGAAAGGAGCAATTTTGGAAGGAGGCATACCATTCAATAGGGTTTATGGCATGCATGCATTCGAATACTCAGTTGTGGATCCAAGGTTTAATGATGTTTTCAACAATGCTATGATCAATAATACCACTATTATCATGAAGAGGATTCTTGAGATCTATGAAGGTTTTGAGCACATCAATAGGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAATATCAAGTTGATTACTTCTAAATATCCTCATATACATGGTGTTAATTTTGACTTACCACACGTCATAGAACATGCACCTCCCTATGCCGGTGTGACACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTGATGGAGATGTAATTTTTATGAAGTGGATACTACACGATTGGACTGATGAACAATGCTTGAAGTTATTGAAGAATTGTCATAAAGCTATTCCAAAAGATGGAAAAGTGATTGTTGTGGATTCAATTACCCCTGTTTTGCCTGAGAGTACAATTGTAACTAAGACTGTTTTTCAATCTGACCTCATGATGATGGCTCAACTTCCAGGAGGAAAAGAGAGAACAAAAGATGAGTTCATGGAATTGGCATTAGGATCTGGATTTAGTGACATCAATTTTGTTTGCCAGTTTTCTATCTTTTGGGTTATGGAATTCATTAAGTAG 1113 0.3881 MSLSLETNGEVNHLTQGDVQNEDGIVFALSLITSITLPLTVRSAVELGIFDILNKAGKDVKLSADDIAIKIGSKNPEAPTMLDRLLKLLTCHSLLYCSLSENQEGRTSPQRLYSLAPLSKYFVTDVDGVSFGSIVNLALDKVYLGSWTEMKGAILEGGIPFNRVYGMHAFEYSVVDPRFNDVFNNAMINNTTIIMKRILEIYEGFEHINRLVDVGGGLGINIKLITSKYPHIHGVNFDLPHVIEHAPPYAGVTHVGGDMFESVPDGDVIFMKWILHDWTDEQCLKLLKNCHKAIPKDGKVIVVDSITPVLPESTIVTKTVFQSDLMMMAQLPGGKERTKDEFMELALGSGFSDINFVCQFSIFWVMEFIK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1557 370 Gene3D - 36 198 IPR036388 -
Tpr5g1557 370 PANTHER O-METHYLTRANSFERASE 6 370 IPR016461 GO:0008168
Tpr5g1557 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 370 IPR016461 GO:0008168
Tpr5g1557 370 SUPERFAMILY "Winged helix" DNA-binding domain 21 125 IPR036390 -
Tpr5g1557 370 Gene3D Vaccinia Virus protein VP39 180 359 IPR029063 -
Tpr5g1557 370 PIRSF O-mtase 5 370 IPR016461 GO:0008168
Tpr5g1557 370 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Tpr5g1557 370 Pfam O-methyltransferase domain 147 352 IPR001077 GO:0008171
Tpr5g1557 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 368 IPR029063 -
Tpr5g1557 370 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1557 Tpr-Chr5 29773795 29777893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1557 13 370 Monolignol Biosynthesis Gene Families AT5G54160 50.838 1.91e-132 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1557 K13066 - gmx:100789402 522.702