Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1554 ATGTATTTTGCTTCACATGCATTGTTAAGCAATATAAAGCAATCTGAAATATTTGCTTATGTCGTTGATACGACCGTGTCATTTACTCCTGATATAAAAAAAATTCAAGATGATATTGCTGGATCTTTAAGACTGGAATGGGGGGGTTGTAATGAACCAGACCGACCCAAAAAACTATGGAGTAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCGAGGCCTGCCTCTTGATTTTGATGCAATAGGAATTCCAAAACAAGACACACACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAATCAAGAAACTTTCAACAACATGGACTGTGATAAGATAATTGAATTGGGTCTTTTATCAGAAGAAGAAGCGTGGATCATGTTCAAAATGTATGCCAAGATAAGTGATAGCACCTCTCAAAAATTGATCGATAAGGGACGTAAAATTGCAAAGGAATGCAAACGATTACCTGTTGCAATTTCAGTTATCGCCAGTAGCTTAAAGGGCCACCAACATCGAGAGCACAAATGGGATGTGACATTGAAATCCTTGAAGAAGCCTGTATCCATGCATGGTGTTGATGATGATAAGGTTGGAATTTATAACTTGTTGAAGATTAGCTATGATAATTTGAAGGATGAAAAAGCCAAGGGGTTGTTTCTCTTATGTTCGGTTTTCCGAGAAGATGAAGAAAATTCTATTGAAGTTATAACAAGACTTTGCATAGGTGTGGGCCTTTTGGGGGAAGATTATGGTAGCTACGATGATGCTCGAAACCTAGTAGTTCTAGCCAAAGACAAGCTCGTAGATTCTTGTTTGTTGTTGGAGGACGGTGAAAAATGTCTAAAACTGCATGATTTGGTCCGAGAAGCAGCTCAATGGATAGCGAACAAAGAGATTCAATGTGTAAAATTGTTTGATGAAAAGCAAAAGTCATTGGTTGAAAAGCAGACAAATATCAAATATTTATTATGTGAAGGGAAGTGCAAGGATTTATTTTCCTTGGAATTTGATAGCTTGAAACTTGAGACTTTAATTGTCAAGGTGGATAGAGAAGAAGAGGATAAATGTATAAAAGTACCAGATTCTTTCTTTGAAAATGTTATCAGGCTCCGTGTTTTGAATTTTTCAGGCATTCATTTCAGCCAATCTTTATCATTACCACCTGCAATTCAGTTATTGACAAATATTCGATCTATGTCGTTTGATCATGTTGATTTAGGTGATATCTCTATTTTGGGAAAACTACAGAGACTTGAGACTCTTGATTTGGATACATGCAAAGTCAATGAATTGCCAAACCAAATTACAGAACTGAAGAAGTTTAAATTGTTGAAGTTGGAATTTTGTGAAATTAGAAAGAATAATCCATTTGAGGTTATTACACTACTACAAAAATAG 1419 0.3587 MYFASHALLSNIKQSEIFAYVVDTTVSFTPDIKKIQDDIAGSLRLEWGGCNEPDRPKKLWSRLTNGDKILVILDDVWDRGLPLDFDAIGIPKQDTHKGCRVLVTSRNQETFNNMDCDKIIELGLLSEEEAWIMFKMYAKISDSTSQKLIDKGRKIAKECKRLPVAISVIASSLKGHQHREHKWDVTLKSLKKPVSMHGVDDDKVGIYNLLKISYDNLKDEKAKGLFLLCSVFREDEENSIEVITRLCIGVGLLGEDYGSYDDARNLVVLAKDKLVDSCLLLEDGEKCLKLHDLVREAAQWIANKEIQCVKLFDEKQKSLVEKQTNIKYLLCEGKCKDLFSLEFDSLKLETLIVKVDREEEDKCIKVPDSFFENVIRLRVLNFSGIHFSQSLSLPPAIQLLTNIRSMSFDHVDLGDISILGKLQRLETLDLDTCKVNELPNQITELKKFKLLKLEFCEIRKNNPFEVITLLQK* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1554 472 PRINTS Disease resistance protein signature 63 77 - -
Tpr5g1554 472 PRINTS Disease resistance protein signature 159 173 - -
Tpr5g1554 472 PRINTS Disease resistance protein signature 420 436 - -
Tpr5g1554 472 Gene3D - 3 121 IPR027417 -
Tpr5g1554 472 PANTHER - 13 454 - -
Tpr5g1554 472 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 13 454 - -
Tpr5g1554 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 229 IPR027417 -
Tpr5g1554 472 Pfam NB-ARC domain 17 216 IPR002182 GO:0043531
Tpr5g1554 472 SUPERFAMILY L domain-like 289 465 - -
Tpr5g1554 472 Gene3D - 124 213 IPR042197 -
Tpr5g1554 472 Gene3D - 214 300 IPR036388 -
Tpr5g1554 472 Gene3D Ribonuclease Inhibitor 302 471 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1554 Tpr-Chr5 29682576 29683994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1554 65 330 WRKY Transcription Factor Family AT5G45050 26.007 3.12e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1554 - - cam:101507086 569.311