Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1550 ATGGGGGGCACTGGAAAGACAACAATGGCCAAAGAAGTGGGTAAAGAGCTAAAACAATCTGAAATATTTGCTTATGTCGTTGATACGACTGTGTCATTTACTCCTGATATAAAAAAAATTCAAGATGATATTGCTGGATCTTTAAGACTGGAATGGGGGGTTTGTAATGAATCAGACCGACCCAAAAAACTATGGAGTAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCAAGGCCCACCCCTTGATTTTGATGCAATAGGAATTCCAAAACAAGACACACACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAATCAAGAAACTTTCAACAAGATGGATTGTGATAAGATAATTGAATTGGGTCTTTTATCAGAAGAAGCGTGGAACATGTTCAAAATGTATGCCAAGATAAGTGATAGCACCTCTCAAAAATTGATCGATAAGGGACGTAAAATTGCAAAGGAATGCAAACGATTACCTGTTGCAATTTCAGTTATTGCCAGTAGCTTAAAGGGCCACGAACATCGAGAGCACAAATGGGATGTGACATTGAAATCCTTGAAGAAGCCTGTATCCATGCATGGTGTTGATGATGATAAGGTTGGAATTTATAACTGTTTGAAGATTAGCTATGATAATTTGAAGGATGAAAAAGCAAAGGGGTTGTTTCTCTTATGTTCGGTGTTCCGAGAAGATGAAGAAAATTCTATTGAAGTTATAACAAGACTTTGCATAGGTGTGGGCCTTTTGGGGGAAGACGATTATGGTAGCTACGATGATGCTCGAAACCTAGTAGTTCTAGCCAAAGACAAGCTCGTAGATTCTTGTTTGTTGTTGGAGGACGGTGAAAAACGTCTAAAACTGCATGATTTGGTCCGTGAAGCAGCTCAATGGATAGCGAACAAAGAGATTCAATGTGTAAAATTGTTTGATAAAAATGAGAAGTCATCGGTTGAAAAGCAAACAAATATCAAATATTTATTATGTGAAGGGAAGCGCATGGATATTTTTAACTTAAAGTTTGATGGTTCCAAACTTGAGGCATTAATTATCAAGGCGGATAAAGATCGCGGATGTACAGAAGTTCCAAAGTCTATTTTTGAAAATGTTATCAAGCTTCGTGTTTTGAATTTTTCTGGCAATTATTTTGACTCGTCTTTATCATTACCAGATTCAATTCGGTCATTGACCAATATTCGATCTATGTCGGTTGATAAAGTGGATTTAGGTGACATCTCTATTTTGGGAAACCTACAAAGTCTGGAGACTCTTGATTTGGTTGAATGCACAATCAAAGAATTGACAGACCAAATTACAAAACTGAGGAAGTTTAAAGTGTTGAAGTTGAAATATTGTGAAATTAGAATGAATAATCCATTTGAAGTTATTAAAAGATGCTCATCACTTGAAGAGTTGTATTTCGAATTTAGTTTCAATCATTTTTGTAAGGAAATAACCTTACCTGAGTTGAAAAGATATCATATCAGTAGTAGAAGTTCCTTTTATTTGGAGAGAATTTCCAGATTTCCCAAATATGTTGTGTTTTGTGGTGATGAAAAGTGTCAATTTTCAGAAGAAACACTCAAGTACTGCATGCAAACAGCAGAGGCTCTTTTTCTAGAAGGAATTAAGGGGGAATGGAGAAATCTCATGCCTGAGATTGTTCCTTCAGAACATGGTATGAATGATCTTGTTGAACTTCATTTGGATGGGATTTCACAAGTACGGTGTCTCATTGACACCATTGGTTCTCATGTACCGATCTTGTCCAACTTGGTTGTACTAGAACTGAGATACATGGAAAATTTGGAACAACTATTCAATGGTAAGGTAAACCTCTGCAATCTAAAGAGCATCACACTTGAGAATTGCCCTATGTTAGTTTCTATACTAGCTTTTCTCTCTGCACAAGACCTTCCAGTACTAGAAGCTATCAGAATAAGAAAATGTGATGGATTGAAATATGTGTTTGGTCAATCCCAACATGTTGAACTGGTTTCACTAACTGAATTGAAGCTCTCTGAATTACCAAAGTTCATTGGTATTTTTGAAGAATGTGTGAAGGGATCATCTTCCAAAGCACAAATACAATTGGATCCTATGAGTGATAGGGATCAACCGCATGACTGTTCAGTGGCATCAGAATCAAATTCATATGGTCATAACATATGGGAATGTCTTGGAATACAATCAAAGATCCTCTGCAATATTAAAGAGATTGTGCTGACTCATTTTCCGAAGATGAAATCAGTATTTATCCTATCTATTGATCTAATAATGCAGTTGGAAACTTTGAAAATTACGAACTGTGATGAACTGAAGCACATAATAATAGACACGGGAGATCATAACACTAGTGGCAACATCTGTGTCAATGTCTTCCCAAAATTGAAATACCTCCGTGTTGAAGATTGTGCACAATTGGAATACATCATATTTGGACCTGAGACTGATGATCATCAAAACCACATGGAGGTTCAACTTCATTTTCCGGAATTGAGACATCTCCATCTTGTCGGTCTACCAAGTTGGATCGCCATGTGTCCAAAACAATATCGAATAACATTTCCTTCTTTGAAAAGTCTTAAACTCGGGAAAAGTTCCCAGGATAGTACAATCATTAAGGATCATTTTCTCACTTTGGAACTGCTCTATCTCGATAATTCCAAAGTAGAAAATATATTTTCCCTGAATGAAATTGATGAACAGCAACTGGACTTAGCTTTGCGAAACATTATATTGACTGATCTGCCTATGATGACTTGTCTTTTTGTGGGTCCCAAATATTCATTTGCCCTCAAAAACCTTGCACGCATAGATATTGTGCGATGTGAAAAATTGAAAATTGCATTCTCCACTTCCATTTTAAGATTTCTACCACAATTAATTAATTTATGGATAGAAGAATGCAAAGAGTTGGAACATATTATTGAAGATGATTTGGAGAATAAACAAAATTCAAATTCCTTGTCTTCAACAACATGCTTCCCAAAGCTAGAAGAACTTGTTGTTAGAAAGTGCAACAAGTTGAAATTTGTTTTCTCCGCTTCCATGTTAAGATTTCTACCACAGTTGCGTTATTTAACAATAGAAGATTGCAAAGAGTTGGAACATATTATTGAAGATCATGATGGTTTGGAGAATAAACAAAATTCAAATTCTTTGTCTTCAACAACATTTTTCCCAAAGCTAGAAGTACTTGGTGTTATAAATTGCAACAAGTTGAAATATGTCCTTCCATTCTCCGTATGTAAAGAGCTTCCGAAGCTAAAGTTTCTGATGATAACAGAAGCAAATGAGTTAGAAGAAATATTCAAAAGTCAAGATGATCAGAATGTTCATATTCCAAATCTAAGTATTTTAGTATTTGATATGCTACCAAGCCTCAGTGATGTCCAGGGAAATCAATTTCAGGCTGTAAAAAGTCGCATCGTGCGGAATTGTGATAAAAAACTCACTCTCACTTCAGCATCAACAACCGACACCTTATCAGAAATTGGTGATTTACAGTTCTCCATAGATTATGATTTGTTTGTGAAACTGGACGATCTATTTAAACAACTACGAAGTGCAGAATCCACCAAAGATTTTGATACCGAGTCGAATTTAGCAAGTGTTGAAATTGTTGAAAATGCTGGGATTGAACAACTGCCAAGTGCAAAAATCACTGAAGATTTTGAACTACCAGTTGATCAAGGGGATCCTTCTCAAAAAGTAGAAGATGTAGCAATACTACCAACAAAATCTGAAGAGTTGCAGAATGAACAATCACTTGGAGAAACTGATACTACAGTCCAATCTTCTCAACTGGAGGTATCAACATCAGAAAAAACAGCAGTTGCAACTGTGTCTACCATTTCAGAAACAAAGAATGAGCCACCTATACAAAAGGCAATTTCCCTCATTTTATACACTATAAACAACCTTTTAAATTTTAAGCAGGGTATTGAGATAGAAGGAACTTCTAAGACTAATAATGATCAAGTTTCTCAAAATGATGTTGCTTTCATGAAAGTGACCTCAAATGCTGAGGAACAATTTTCTAAACCCTCTCCTAGCATCACATCTCCTATTGCATCTCAGTTCCCTTCAACACATTCTAAAGGTGGCCCTTCTCAAAAAGTAGAAGATTTAAGTTCTTCTTTGCTTGTCAAGAGGGAGCTTGAGGAACTGGTCTCCAAGAAACATTTGGATTATGAGAACTTGTCTTTGTTAACTGATTTTCTTGTTAAGAATCCTTCTGTTCATTTAAAGGACACTTCACTTCCTAATAGATACAAGGGTTGTGCCTACAACTTACTGTCCGAGCTATTGAAATTCCTCGAAACCCATAGTTTGGTTGAAGTATCGGGCTCACGCCACTCTGAATTTGTGGAGCTATTACAAGATGCGCGCTACTTTGCTTTTGATAAGGAATGGTTGGATGGTGTCGAGAGGCGTGCTTTATTTCCAGAAACACAAGTATCTCCAGATGCCTTGGAAAAATTATTGGATTCCAAGAAACGGGTTACTAAGGATGTTGAAGAGTTGCGTTTCAAGATACACATTTTAAGTCAACATGTGGAAGATCTTAAGCATCATCAATTGATATCCTCTGAAGCTGCTTTGGAGAGTATCATTGAACAAGAAGCGGTTCTAACTGCCCCTATTGGCTATTAG 4680 0.3647 MGGTGKTTMAKEVGKELKQSEIFAYVVDTTVSFTPDIKKIQDDIAGSLRLEWGVCNESDRPKKLWSRLTNGDKILVILDDVWDQGPPLDFDAIGIPKQDTHKGCRVLVTSRNQETFNKMDCDKIIELGLLSEEAWNMFKMYAKISDSTSQKLIDKGRKIAKECKRLPVAISVIASSLKGHEHREHKWDVTLKSLKKPVSMHGVDDDKVGIYNCLKISYDNLKDEKAKGLFLLCSVFREDEENSIEVITRLCIGVGLLGEDDYGSYDDARNLVVLAKDKLVDSCLLLEDGEKRLKLHDLVREAAQWIANKEIQCVKLFDKNEKSSVEKQTNIKYLLCEGKRMDIFNLKFDGSKLEALIIKADKDRGCTEVPKSIFENVIKLRVLNFSGNYFDSSLSLPDSIRSLTNIRSMSVDKVDLGDISILGNLQSLETLDLVECTIKELTDQITKLRKFKVLKLKYCEIRMNNPFEVIKRCSSLEELYFEFSFNHFCKEITLPELKRYHISSRSSFYLERISRFPKYVVFCGDEKCQFSEETLKYCMQTAEALFLEGIKGEWRNLMPEIVPSEHGMNDLVELHLDGISQVRCLIDTIGSHVPILSNLVVLELRYMENLEQLFNGKVNLCNLKSITLENCPMLVSILAFLSAQDLPVLEAIRIRKCDGLKYVFGQSQHVELVSLTELKLSELPKFIGIFEECVKGSSSKAQIQLDPMSDRDQPHDCSVASESNSYGHNIWECLGIQSKILCNIKEIVLTHFPKMKSVFILSIDLIMQLETLKITNCDELKHIIIDTGDHNTSGNICVNVFPKLKYLRVEDCAQLEYIIFGPETDDHQNHMEVQLHFPELRHLHLVGLPSWIAMCPKQYRITFPSLKSLKLGKSSQDSTIIKDHFLTLELLYLDNSKVENIFSLNEIDEQQLDLALRNIILTDLPMMTCLFVGPKYSFALKNLARIDIVRCEKLKIAFSTSILRFLPQLINLWIEECKELEHIIEDDLENKQNSNSLSSTTCFPKLEELVVRKCNKLKFVFSASMLRFLPQLRYLTIEDCKELEHIIEDHDGLENKQNSNSLSSTTFFPKLEVLGVINCNKLKYVLPFSVCKELPKLKFLMITEANELEEIFKSQDDQNVHIPNLSILVFDMLPSLSDVQGNQFQAVKSRIVRNCDKKLTLTSASTTDTLSEIGDLQFSIDYDLFVKLDDLFKQLRSAESTKDFDTESNLASVEIVENAGIEQLPSAKITEDFELPVDQGDPSQKVEDVAILPTKSEELQNEQSLGETDTTVQSSQLEVSTSEKTAVATVSTISETKNEPPIQKAISLILYTINNLLNFKQGIEIEGTSKTNNDQVSQNDVAFMKVTSNAEEQFSKPSPSITSPIASQFPSTHSKGGPSQKVEDLSSSLLVKRELEELVSKKHLDYENLSLLTDFLVKNPSVHLKDTSLPNRYKGCAYNLLSELLKFLETHSLVEVSGSRHSEFVELLQDARYFAFDKEWLDGVERRALFPETQVSPDALEKLLDSKKRVTKDVEELRFKIHILSQHVEDLKHHQLISSEAALESIIEQEAVLTAPIGY* 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1550 1559 Gene3D Ribonuclease Inhibitor 526 695 IPR032675 -
Tpr5g1550 1559 Gene3D Ribonuclease Inhibitor 793 978 IPR032675 -
Tpr5g1550 1559 SUPERFAMILY RNI-like 930 1114 - -
Tpr5g1550 1559 MobiDBLite consensus disorder prediction 1353 1380 - -
Tpr5g1550 1559 Pfam NB-ARC domain 1 220 IPR002182 GO:0043531
Tpr5g1550 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 233 IPR027417 -
Tpr5g1550 1559 Gene3D - 1 126 IPR027417 -
Tpr5g1550 1559 Coils Coil 1500 1520 - -
Tpr5g1550 1559 Gene3D Ribonuclease Inhibitor 979 1182 IPR032675 -
Tpr5g1550 1559 SUPERFAMILY L domain-like 290 684 - -
Tpr5g1550 1559 Gene3D - 129 222 IPR042197 -
Tpr5g1550 1559 PRINTS Disease resistance protein signature 68 82 - -
Tpr5g1550 1559 PRINTS Disease resistance protein signature 163 177 - -
Tpr5g1550 1559 PRINTS Disease resistance protein signature 423 439 - -
Tpr5g1550 1559 Gene3D Ribonuclease Inhibitor 296 522 IPR032675 -
Tpr5g1550 1559 SUPERFAMILY L domain-like 563 895 - -
Tpr5g1550 1559 MobiDBLite consensus disorder prediction 1260 1279 - -
Tpr5g1550 1559 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 7 662 - -
Tpr5g1550 1559 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 892 1125 - -
Tpr5g1550 1559 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 670 822 - -
Tpr5g1550 1559 PANTHER - 892 1125 - -
Tpr5g1550 1559 PANTHER - 670 822 - -
Tpr5g1550 1559 PANTHER - 7 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1550 Tpr-Chr5 29593087 29600390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1550 1 459 WRKY Transcription Factor Family AT5G45050 23.669 1.11e-12 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1550 - - mtr:MTR_3g062420 1159.44