Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1549 ATGGCAAGTTTCCTCTATGAATTTGTGAAGCCATATGTGGCGAAATTGATTGATGGGGCAATAGCAGAAGCACGTCATGTATTTTGCTTCACATGCATTGTTAAGGAATTTGAAGAAGAAAGGGCCAGGTTGGAACCAGAAAGGATAACTATGGCGCAACGTGTCAAAGTGGCAAAAGAAAGAGGTAAAGATATTCAAGCTAAAGTTGGTTCTTGGGAAGAGGAAATTGATAAGCTCAATCAAGTGGACACAAAAACAAAACAACCATATTTTTTTGGATTTTGTCCTGATTGCATATGGCGATATAAAAAGGGAAAGGAGTTGGTAAATACAGTGAAGAGGATCAAAGAACTAAAAGAAAAGGGAGAGAAATTTGAAAATATTGAACTTCCTCGCTGTCTTCCAGATGCTGAACGCTATTCATCAAAAGATTACATTTCTTTTGAAAGCAGAAAGTCAAAATACGAAGAACTGTTGGATGCACTAAAAGATGATAACAACTATATAACCGGATTGCAAGGGATGGGGGGCACTGGAAAGACTACATTGGTCAAAGAAGTGGGTAAAGAGCTAAAGCAATCTGAACAATTTGCTTATGTTGTTGATACAACCGTGTCATTTACACCTGATATAAAAAAAATTCAAGATGATCTTGCTGGATCTTTAGGATTGAAATGGGAGGATTGTAATGAATCAGACCGACCCAAAAAACTATGGAGCAGATTAACAAACGGTGACAAAATTCTTCTGATACTGGATGATGTGTGGGATCGAGGCCCACGTCTTGATTTTGAGGCAATAGGGATTCCAAAGCGAGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAGTAAAATAACTTTCGACATAATGGATTGTCATAAGACAATTGAATTGGGTCTTTTATCTACAGAAGATGCATGGGTCATGTTTGAATGGTATGCCGGGATATGTAATAGCTCCTCAGAAATATTGATCAATAAGGCACGTGAAATTGCAAAGGAATGCAAACAATTACCTGTTGCAATTTCAGTTATCGCCAGCAGCTTAAAGGGCCAACAAAATCGAGAGCATGAGTGGGATGTGACATTGAAATCCTTGAAGCAGCCTGTATCCATGCATGGTGTTGATGATGATATGGTTGGAATTTATAACTGTTTGAAGATTAGCTATGATAATCTGAAGGATGAAAAAGCCAAGGGGTTGTTCCTCTTATGTTCGGTTTTCCGAGAAGATGAAGAAAATTCTATTGAAGTTCTAACTAGACTTTGCACAGGAGTGGGTCTTTTGGGGGAAGATTATGGTAGCTACGATGATGCTCGAAACCAAGTAGTTGTAGCCAAAAACAAGCTCGTAGATTCTTGTTTGTTGTTGGAGGTCAATAACAATCGTCTAAAAATGCATGATTTGGTTCGTGATGCAGCTCAATGGATAGCGAACAAAGAGATTCAATGTATAAAATTGTTTGATAAAAAGCAAAAGTCATTGGTTGAAAATCAGACAAATATCAAATATTTATTATGTGAAGGGAAGTGCATGGATTTTTTTAACTTGAAATTTGATAGTTCCAAACTTGAGATTTTAATTGTCTCGGTGGATGGAGATGAAGACCGCGCACGTCTAGAAGTTCCAAAGTCTTTCTTTGAGAATTTGATCAAGCTTCGTGTTTTGTATTTTTCAGGCAATTACAACCAATTGTCTTTATCATTACCAGATTCAATTCGGTCAATGACAAATATTCGATCTATGTCGGTTGAAAGTGTGGCTTTAGGTGACATCTCCATTTTGGGAAACCTAGAAAGTCTTGAGACTCTTGATTTGAAATATTGCAAAATAAAAGAACTGCCAAACCAAATTACAAAACTGGGGAAGTTTAAATCGTTGAAGTTAAAATGTTGCGAAATTAGAATGAATAATCCATTTGAAGTTATTGAAAGATGCTCATCACTTGAAGAGTTGTATTTCAAAAATAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTGAGTTGCAAAGATATCATATCAATAGTGGTGTGAATTCCTTATATTCTTCTTCAATGGAGAGAATCAAATTCCCAAAATATGTGTTGTTTGACTGTGATGATGATGATGTAGCGTGTCAATTTTCAAAAGGAACACTCAAGTACTGCATGCAAACAGCAGATGCTCTTTCGCTACATGGAATTGAGTGGGGATGGAGAAATCTGATGCCTGAGATTGTTCCTTTAGAACTAGGTATGAATGATCTTGTTGAACTTCATTTGTATTGGATTTCACAACTACAGTGCCTTGTTGACACCATTGGTTCTCAAGTGCCAAATGTTTTGTCCAAGTTGGTTGTACTACAACTGCATGGAATGGAAAATTTGGAAGAACTATTCAATGGACCCCTTTCCTTTGAATCTTTGAACAATTTAGAAAAGCTATCAATCAAGGATTGTATACATTTACGAAGCTTGTTTAAAGGTAAGCTAAACCTCTGCAATCTAAAGACCATCACACTTGAGAATTGCCCTATGTTAGCTTCCCTATTTGAAGCGTCTACTTCTCGAAGCCTTGTGCTACTAGAAGAATTGGAAATATCTGACTGTGAGGGACTGAAAACCATAATAGCAGATGAAAGAAGAGAGGATGAAGAGATAGATGACAGTGGTAATAATAACAAGAGTCATGGTTCAATGTTTTCAAAACTAAAAGTTATTCGTATTGAGAGATGTCACCTATTAGAATCTATGCTATCTTTCCTCTCTGCTCAAGGCCTTCCAGTAATAAAAGCTATCAGAATAAGAGAATGTGATGGATTGAAATATGTGTTTGGCCAATCTCAACATGTTGAACTGGTTTCACTGAGTAAATTGGAGCTCTATGAATTACCAAACTTCATTGGTATTTTTGAAGAATGTAATCATCGCATGTCGTCATGTGTGAAGGGATCACATTCCACTTCCAATTATGGTTCCAAAGCAGAAATACAATTGGATCCTATCAAATGCAATGCCTTCTCTTGGTGGATTCGTTTATGTTGTCAAACCACAATCCCATTGGTTGATGATGTTGATAGGGATCAACCGCATGACTGCTCAGTGGCATCTGAATCAAATTCACACCGTCTTAACATATGGGAACGTGTTCAATGTCTTCCAATACAATCAAAGATCCTCTGCAATATTAAAGATATTGTACTGACTCATTTTCCGAAGATGAAATCAGTATTTATCCTATCTATTGATCTAATAATGCAGTTGGAAACTTTGGCAATTATGAACTGTGATGAACTGAAGCACGTAATAATAGACACTGGAGAGCATAACACTGGTGGCAACATCTGTGTCAATGTCTTCCCAAAATTGAACAAGCTCTTTGTTGAAGATTGCGCACAATTGGAATACATATTTGGACATGACACTATTATTAATCATCAAAACTACATGGAGATTCAACTTCATTTTCCGGAATTGAGAGATCTCCATCTTGTCGGTCTACCAAGTTTGATCGCCACGTGTCCCAAACAATATCGAATAACCTTTCCTTCTTTGAAAAGTCTTGAACTCGGGAAATGTTCCCAGGATAATACAATCATTAAGGAACTGAGTGGGAACGTGGATTATTTTCTCACTTTGCAAGGCATTATATTATCCAGATGCAATGTAGAAAATATATTTTCCCTCGATGAAATAGATGGACAACAACTGGACTTAGGTTTGCGATACATTATGTTGTATGATCTGCCTATGATGACTTGTCTTTTTGTGATTCCCAAAAATTCATTTGCCCTCAAAAACCTTACACACATAAGAATTTTGCGATGTGACAAATTGAAAATTGCATTCTCCACTGCCATTTTGAGATTGCTACTAGAGTTGGTTAATTTAAGTATAGAAGAATGCAAAGAGTTGGAACATATTATTGAAGATGATGATGGTTTGGAGAATAAAAATAATTCAAAGTCCTTGTCTTCAACAACATGCTTCCCAAAGCTACAAGAACTTGCTGTTATAAAGTGCAACAAGTTGAAATCTGTCTTCTCCACTTCCATGTTAAGATTTCTACCAGAGTTGGTTTATTTAAGAATAGAAGAATGCAAAGAGTTGGAACATATTATTGAAGATGATGATGGTTTGGAGAATAAACAAAATTCAAATTCCTTGTCTTCAACAACATGCTTCCCAAAGCTACAAGGACTTGCTGTTATAAATTGCAACAAGTTGACATATGTCCTTCCATTCTCGGTATGTAAAGAGCTTCCGAAGCTAGATGTTCTGTTGATAACAAAAGCAAATGAGTTAGAGGAAATATTCAAAAGTGAAGATGATCAGAAAGTTGATATTCCAAATCTAAATGTTGTAGCATTTGATATGCTGCCAAGCCTCTGTTGTGCTCAAGGAAATCAATTTCAGGCTGTGAAAAATTGCTTCGTGCGGAATTGTCAAAAACTCACTCTGACTTCAGCAGAAGCAACCGACATCTTAGGAGAATTTAAAGGTTCAGAATATGGCACAGGTTATGATTTGTATGTGAATGTGAGCGATCTATTTGAACAACTACAAAGTTCAGAAACCACTGAAGATTTTGATACCGGGTCGAATTTAGCAAGTATTGAAATTGTTGAAAATGCTGGGATTGAACAACTGCCAAGTGCAAAAATCACTGAAGATTTTGAACTACCAGTTCTCGAAAATGTTCCGGATTTAACAATACTACCAACAAATTCAAAAGAGTTGCTGAATGAACGATCAATGGAACAACAACATTCACTTGAAGAAATTGATACTATAGTCCAACCTTCTCAATTGGAGGGATCAACATCAGAAAAAACACCAGTTGCAACTATACAAGTCGTTCCATCTAAGCAAAAGGGTATTGAGATAGAAGGGACTTCTAAGACTAATAATGGTCATGGGGATCCTTCTCAAAAAGTAGAAGATTTAGCAATACTACCAACAAATTCCGAAATACAAATGAAACAAACCCTAGAGGCTGAGCACGTATTTATTCCAAACGATCCAGATTTAGCAATACTGCCAACAAGTTCAGAAATACAAATGAAACAAACACCAGAGACAGCACATGAATATGTTGAAAATGTTCTGGATTTAGAACAATCACTTGGAGAAACTGATACTATAGTCAAACCTTCACAAGTACATAATTTGGAGGAATCAACATCAGAAAAAACAGCACTTGCAGCTGTGTCTACCATTTCGGGAACAAAGAATGAGCCACCTTTACAAGTAGTTACTTCTAAACAAAAGGGTGTTGCAATAGAAGAAACTACTAAGAATAAGAATGATCAAGTTTCTCCAAATGGCGATGCTTTCATGAAAGTAAACTCAAATGTTGAGGAACGGTTTTCTAAGGATGATGAAATAATAGTTTCCAAATCTAAACCCTCTCCTAGCATCCCATCTCCTATTGCATCTCAGATCCCATCAATGCCTTCTAAAGGTGACCCTTCTAAAAAAGTAGAAGATTTAAGTTCTTCGCTTGTCAAGAGGGAGCTTGAGCAACTGGTCTCCAAGAATCATTTGGATTATGAGAACTTGTCTTTGTTATCTGATTTTCTTGTTGAGAATCCTTCTGTTCGTTTAAAGGATACTTCACTTAGTAATAAATACAAGGGATGTGCCTACAACTCACTAGCTGAGCTATTGAAATTCCTCAAAACCCATACTTTGCTAGAAGTATCAGGCTCAAGCCACTCTGAATTTGTGGAGCTATTACAAGATGCACTCAGCTTTGCTTTTGATAAGGATTGGTTGGATGGTGTCGAGAGGCGTGCTTTATTTCCTGAAATACAAGTATCTCCAGATGCTTTGGAAAAATTGTTGGATTTCAAGAAACGGGTTACCAAGGATGTTGAAGACTTGCGTTTGAAGATAGATTTTTTAAGTCAAGTTGCGGAAGATCTTAAGCATCAATTGACATCCTCTGAAGCTGTTTTGGAGAGTATCATTCAACAAGAGGCAGTTTTAATTGCCCCTATTGGTTATTAG 6003 0.3673 MASFLYEFVKPYVAKLIDGAIAEARHVFCFTCIVKEFEEERARLEPERITMAQRVKVAKERGKDIQAKVGSWEEEIDKLNQVDTKTKQPYFFGFCPDCIWRYKKGKELVNTVKRIKELKEKGEKFENIELPRCLPDAERYSSKDYISFESRKSKYEELLDALKDDNNYITGLQGMGGTGKTTLVKEVGKELKQSEQFAYVVDTTVSFTPDIKKIQDDLAGSLGLKWEDCNESDRPKKLWSRLTNGDKILLILDDVWDRGPRLDFEAIGIPKRDNHKGCRVLVTSRSKITFDIMDCHKTIELGLLSTEDAWVMFEWYAGICNSSSEILINKAREIAKECKQLPVAISVIASSLKGQQNREHEWDVTLKSLKQPVSMHGVDDDMVGIYNCLKISYDNLKDEKAKGLFLLCSVFREDEENSIEVLTRLCTGVGLLGEDYGSYDDARNQVVVAKNKLVDSCLLLEVNNNRLKMHDLVRDAAQWIANKEIQCIKLFDKKQKSLVENQTNIKYLLCEGKCMDFFNLKFDSSKLEILIVSVDGDEDRARLEVPKSFFENLIKLRVLYFSGNYNQLSLSLPDSIRSMTNIRSMSVESVALGDISILGNLESLETLDLKYCKIKELPNQITKLGKFKSLKLKCCEIRMNNPFEVIERCSSLEELYFKNSFNDFCQEITLPELQRYHINSGVNSLYSSSMERIKFPKYVLFDCDDDDVACQFSKGTLKYCMQTADALSLHGIEWGWRNLMPEIVPLELGMNDLVELHLYWISQLQCLVDTIGSQVPNVLSKLVVLQLHGMENLEELFNGPLSFESLNNLEKLSIKDCIHLRSLFKGKLNLCNLKTITLENCPMLASLFEASTSRSLVLLEELEISDCEGLKTIIADERREDEEIDDSGNNNKSHGSMFSKLKVIRIERCHLLESMLSFLSAQGLPVIKAIRIRECDGLKYVFGQSQHVELVSLSKLELYELPNFIGIFEECNHRMSSCVKGSHSTSNYGSKAEIQLDPIKCNAFSWWIRLCCQTTIPLVDDVDRDQPHDCSVASESNSHRLNIWERVQCLPIQSKILCNIKDIVLTHFPKMKSVFILSIDLIMQLETLAIMNCDELKHVIIDTGEHNTGGNICVNVFPKLNKLFVEDCAQLEYIFGHDTIINHQNYMEIQLHFPELRDLHLVGLPSLIATCPKQYRITFPSLKSLELGKCSQDNTIIKELSGNVDYFLTLQGIILSRCNVENIFSLDEIDGQQLDLGLRYIMLYDLPMMTCLFVIPKNSFALKNLTHIRILRCDKLKIAFSTAILRLLLELVNLSIEECKELEHIIEDDDGLENKNNSKSLSSTTCFPKLQELAVIKCNKLKSVFSTSMLRFLPELVYLRIEECKELEHIIEDDDGLENKQNSNSLSSTTCFPKLQGLAVINCNKLTYVLPFSVCKELPKLDVLLITKANELEEIFKSEDDQKVDIPNLNVVAFDMLPSLCCAQGNQFQAVKNCFVRNCQKLTLTSAEATDILGEFKGSEYGTGYDLYVNVSDLFEQLQSSETTEDFDTGSNLASIEIVENAGIEQLPSAKITEDFELPVLENVPDLTILPTNSKELLNERSMEQQHSLEEIDTIVQPSQLEGSTSEKTPVATIQVVPSKQKGIEIEGTSKTNNGHGDPSQKVEDLAILPTNSEIQMKQTLEAEHVFIPNDPDLAILPTSSEIQMKQTPETAHEYVENVLDLEQSLGETDTIVKPSQVHNLEESTSEKTALAAVSTISGTKNEPPLQVVTSKQKGVAIEETTKNKNDQVSPNGDAFMKVNSNVEERFSKDDEIIVSKSKPSPSIPSPIASQIPSMPSKGDPSKKVEDLSSSLVKRELEQLVSKNHLDYENLSLLSDFLVENPSVRLKDTSLSNKYKGCAYNSLAELLKFLKTHTLLEVSGSSHSEFVELLQDALSFAFDKDWLDGVERRALFPEIQVSPDALEKLLDFKKRVTKDVEDLRLKIDFLSQVAEDLKHQLTSSEAVLESIIQQEAVLIAPIGY* 2001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1549 2000 PRINTS Disease resistance protein signature 169 184 - -
Tpr5g1549 2000 PRINTS Disease resistance protein signature 242 256 - -
Tpr5g1549 2000 PRINTS Disease resistance protein signature 338 352 - -
Tpr5g1549 2000 PRINTS Disease resistance protein signature 599 615 - -
Tpr5g1549 2000 Pfam NB-ARC domain 154 395 IPR002182 GO:0043531
Tpr5g1549 2000 Coils Coil 1956 1976 - -
Tpr5g1549 2000 Gene3D - 303 397 IPR042197 -
Tpr5g1549 2000 PANTHER - 54 971 - -
Tpr5g1549 2000 PANTHER - 1176 1451 - -
Tpr5g1549 2000 Gene3D - 134 300 IPR027417 -
Tpr5g1549 2000 SUPERFAMILY L domain-like 465 962 - -
Tpr5g1549 2000 Gene3D Ribonuclease Inhibitor 460 703 IPR032675 -
Tpr5g1549 2000 Gene3D Ribonuclease Inhibitor 1044 1312 IPR032675 -
Tpr5g1549 2000 SUPERFAMILY RNI-like 1211 1435 - -
Tpr5g1549 2000 MobiDBLite consensus disorder prediction 1796 1824 - -
Tpr5g1549 2000 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1176 1451 - -
Tpr5g1549 2000 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 54 971 - -
Tpr5g1549 2000 Coils Coil 145 165 - -
Tpr5g1549 2000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 408 IPR027417 -
Tpr5g1549 2000 Gene3D Ribonuclease Inhibitor 1313 1592 IPR032675 -
Tpr5g1549 2000 Gene3D Ribonuclease Inhibitor 727 883 IPR032675 -
Tpr5g1549 2000 MobiDBLite consensus disorder prediction 1799 1817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1549 Tpr-Chr5 29574061 29585610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1549 170 632 WRKY Transcription Factor Family AT5G45050 23.237 1.95e-13 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1549 - - mtr:MTR_3g062420 1742.24