Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1548 ATGGCAAGTTTCCTCTGTGATTTGGTGAAGCCATACGTGGAGAAATTGATTAATGGGGCAATAGCAGAAGCCCATCATGTATTTTGCTTCACATGCATTGTTAAAGAATTTGAAGAAGAAAGAGTTAGGTTGGAACCAGAAAGGATAACTATGGTGCAACGTGTCAAAGTGGCAAAAGAAAGAGATAAGGATATTCAAGCTGATGTTGGTTCTTGGGCAGAGGAAATTGATAAGCTCAATCAAGTGGACACAAAAACAAAACAAACATGTTTTTTTGGATTTTGTCCTGATTGTATATGGCGTTATAAAAAGGGAAAGGAGTTGGCAAATAACTTGAAGGATATCAAACGACTACTAGAAAAGGGAGGGACATTTGTTGATATTGAACTTCCTCGCCCTCTTCCAGATGTTGAACGTTATTCAACCAAAGAGTACATTTCTTTTAAAAGTAGAGAGGCAAATCAAAAAGAACTTTTGGATGCACTAAAAGATGACAACAACTATATAACCGGATTGCAAGGGATGGGGGGCACTGGAAAAACTACATTGGCCAAAGAAGTGGGTAAAGAGCTAAAGCAATCTGAACAATTTGCGTATGTCGTTGATACGACAGTGACGTTTACTCCTGATATAAAAAAGATTCAAGATGAGATTGCTGGACCTTTAGGATTGAAATTGGATGGATTTAATGAAGTAGACCGACCCAAAAAACTATGGAGCAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCGAGGCCCACCTCTTGATTTTGATGCAATAGGGATTCCAAAACGAGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAATAAACAAACTTTCAACAAAATGGATTGTGATAAGAGAATTGAATTGGGTCTTTTATCTGAAGAAGACGCATGGCTCATGTTCGAAATGTATGCCGGGATACGTGATAGCTTCCCAAAAAAATTGATCGATAAGGCACGTGAAATTGCAATTGAATGCAAAAGATTGCCAGTTGCAATATCAGTTATTGCCAGTAGCTTAAAGGGCCAACAAGATCAAGAGGTTGAATTGGATGTGACATTGAATTCCTTGAAGCAGCCTGTATCCATGCATGGTGTTGATGACGATATGGCTGGAATTTATAAATGTTTGAAGTTTAGCTATGACTATTTGAAGGATGAAAAAGCCAAGGGGTTGTTCCTCTTATGTTCGGTTTTCCGAGAAGATGAAGAAATTTCTATTAGCATAGGAGTGGGTCGTTTGGGAGAAGATTATGGCTATTATAATGATGCTCGAAACCAAGTAGTTGTAGCCAGAAACAGACTCGTAGATTCTTGTTTGTTGTTGGAGGATGATAAAAAACGTCTAAAAATGCATGATTTGGTTCGTGATGCAGCTCATTGGATAGCAAACAAAGAGATTCAATGTGTAAAACTGTTTGATAAAAAGCAAAAGTCATTGGTTGAAAAGCAGACAAATATCAAATATTTATTATGTGAAGGGAAGTGCCTGGATTTATTTTTCTTCAATTTTGATGGTTCCAAACTTGAGACTTTAATTTTCAAGGTGGATAGAGATTATGACAGCGAATGTATAGAAGTCCCAAATTCTTTCTTTGAAAATGTTATCAACCTTCGTGTTTTGTATTTTTCTGGCAATTACTTTCAACATTTATCATTACCAGATTCAATTCAGTCATTGACCAATATTCGATCTATGTTGGTTGATGAAGTGGATTTAGGTGACATCTCTATTTTGGGAAACCTACAAAGTCTGGAGACTCTTTATTTGGTTAAATGCACAATCAAAGAATTGCCAGACCAAATTACAAAGCTGAGGAAGTTTAAATTGTTGAAGTTGAAACATTGTAAAATTAGAACGAATAATCCATTTGAAGTTATTAAAAGATGCTCATCACTTGAAGAGTTGTATTTCAAATATAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTGAGTTGCAAAGATATCATATCAGGAATCATTGGAAAGCCTTCTATTCGGACAAAACCAATTTATCCAAATATGTTGTGTTTTGTGGCAATGAAAAGTGTCAATTTTCAGAAGAAACACTCAAGTACTGCATGCAAACAGCAGAGGCTCTTTCTCTAGAAAGAATTAAGGGGGAATGGAGAAATCTCAGCAGAGGCTCAGATATGAATGATCTTGTTGAACTTCATTTGAGGGACATGCCACAACTACAGTGCCTGATTGACACCGTTGGTTCTCAAGTACCAATTGTGTTGTCCAAGTTGGTTGTACTAGAACTGAAAAACATGGAAATTTTGGAAGAACTATTCATTGGCCCCTTTTGCTTTCAATCTTTGAACAATTTAGAAAATCTATCAATCATGAATTGTAAACATTTGCGAAGCTTGTTTAAAGGTAAGCTAAACCTCTGCAATCTAAAGACCATCACACTTGATGATTGCCCAATGTTAGTTTCCCTATTTGAAGTGTCAACTTTTCGAAACCTACTGCTACTAGAGACATTGGAAATATTTAACTGCGAGGGACTGGAAACCATAATAGCAGATGAAAGACGAGAGGATGAAGAAATAGATGACGGTGGTAATAATAAGAATCATGGTTCAATGTTTTCGAAACTGAAAGTTATTAGTATTGAGGAATGTCACCGATTAGAATCTATACTACCTTTCCTCTTTGCTCAAGACCTTCCAGCACTGGAAACTATCAGAATAACAAAATGTGATGGATTGAAATATGTGTTTGGCCAATCTCAACATTTTGAACTGGTTTCACTAAGTCAATTGGAGCTTTCTGAATTACCAAACTTCATTGATATTTTTGAAGAATGTTATGATCCCATGTCTTCAAGTGTGAAAGGATCATCTTCCACTTCCAAAGCACAAATACAATTGGATCCTATCAAATGCAATACCTTCTCTTGGTGGACTCGTTTATGTTGTCAAACCAGAATCCCATTAGTTGATGATGATGGGGATCAACCGCATGATAACTCAGTGGCATCAGAATCAAATTCACATCGTCTTAACATATGGAAACGTGTTCAATGTCTTCCAATACAATCAAAGATTCCCTGCAATATTAAAGAGATTGTACTGACTCATTTTCCGAAGATGAAATCAGTATTTATCCTATCTATTGCTCAAATAATGCAATTGGAAACTTTGAGAATTATGAACTGTGATGAACTGAAGCACGTAATAGTAGACACTGGAGATCATGAGACTGGTGGCAATAACTGGGTCAATGTCATCCCAAAATTGAAAGAGCTCCTTGTTTTTAATTGCCCGCAGTTGGAATACATATTTGGACATGACACTAGTGATCATCAAAACCACATGGAGATTCGGCTTCATCTTCCAGAATTGAGAGATCTCCATCTTTTTGGTCTACCAAGTTTGATCGCCATGTGTCCCAAACAATATCGAATAACATTTCCTTCTTTGAAAAGTCTTAAACTCAGGAAATGTTCCAAGGATAATACAATCATTAAGGTATCCCTCTTTCCATATATCTTTTGTTGTTTGATAATTTGTTAG 3564 0.3642 MASFLCDLVKPYVEKLINGAIAEAHHVFCFTCIVKEFEEERVRLEPERITMVQRVKVAKERDKDIQADVGSWAEEIDKLNQVDTKTKQTCFFGFCPDCIWRYKKGKELANNLKDIKRLLEKGGTFVDIELPRPLPDVERYSTKEYISFKSREANQKELLDALKDDNNYITGLQGMGGTGKTTLAKEVGKELKQSEQFAYVVDTTVTFTPDIKKIQDEIAGPLGLKLDGFNEVDRPKKLWSRLTNGDKILVILDDVWDRGPPLDFDAIGIPKRDNHKGCRVLVTSRNKQTFNKMDCDKRIELGLLSEEDAWLMFEMYAGIRDSFPKKLIDKAREIAIECKRLPVAISVIASSLKGQQDQEVELDVTLNSLKQPVSMHGVDDDMAGIYKCLKFSYDYLKDEKAKGLFLLCSVFREDEEISISIGVGRLGEDYGYYNDARNQVVVARNRLVDSCLLLEDDKKRLKMHDLVRDAAHWIANKEIQCVKLFDKKQKSLVEKQTNIKYLLCEGKCLDLFFFNFDGSKLETLIFKVDRDYDSECIEVPNSFFENVINLRVLYFSGNYFQHLSLPDSIQSLTNIRSMLVDEVDLGDISILGNLQSLETLYLVKCTIKELPDQITKLRKFKLLKLKHCKIRTNNPFEVIKRCSSLEELYFKYSFNDFCQEITLPELQRYHIRNHWKAFYSDKTNLSKYVVFCGNEKCQFSEETLKYCMQTAEALSLERIKGEWRNLSRGSDMNDLVELHLRDMPQLQCLIDTVGSQVPIVLSKLVVLELKNMEILEELFIGPFCFQSLNNLENLSIMNCKHLRSLFKGKLNLCNLKTITLDDCPMLVSLFEVSTFRNLLLLETLEIFNCEGLETIIADERREDEEIDDGGNNKNHGSMFSKLKVISIEECHRLESILPFLFAQDLPALETIRITKCDGLKYVFGQSQHFELVSLSQLELSELPNFIDIFEECYDPMSSSVKGSSSTSKAQIQLDPIKCNTFSWWTRLCCQTRIPLVDDDGDQPHDNSVASESNSHRLNIWKRVQCLPIQSKIPCNIKEIVLTHFPKMKSVFILSIAQIMQLETLRIMNCDELKHVIVDTGDHETGGNNWVNVIPKLKELLVFNCPQLEYIFGHDTSDHQNHMEIRLHLPELRDLHLFGLPSLIAMCPKQYRITFPSLKSLKLRKCSKDNTIIKVSLFPYIFCCLIIC* 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1548 1187 Gene3D Ribonuclease Inhibitor 506 866 IPR032675 -
Tpr5g1548 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 408 IPR027417 -
Tpr5g1548 1187 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 53 952 - -
Tpr5g1548 1187 SUPERFAMILY L domain-like 462 1174 - -
Tpr5g1548 1187 PANTHER - 53 952 - -
Tpr5g1548 1187 CDD AAA 151 303 - -
Tpr5g1548 1187 Pfam NB-ARC domain 157 394 IPR002182 GO:0043531
Tpr5g1548 1187 PRINTS Disease resistance protein signature 169 184 - -
Tpr5g1548 1187 PRINTS Disease resistance protein signature 242 256 - -
Tpr5g1548 1187 PRINTS Disease resistance protein signature 338 352 - -
Tpr5g1548 1187 PRINTS Disease resistance protein signature 786 802 - -
Tpr5g1548 1187 Gene3D - 392 473 IPR036388 -
Tpr5g1548 1187 Gene3D Ribonuclease Inhibitor 867 1184 IPR032675 -
Tpr5g1548 1187 Gene3D - 136 300 IPR027417 -
Tpr5g1548 1187 Gene3D - 303 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1548 Tpr-Chr5 29559064 29565631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1548 170 579 WRKY Transcription Factor Family AT5G45050 25.175 1.20e-15 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1548 - - cam:101507086 1353.58