Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1546 ATGGCGAGTTTCCTCCTAGATTTGATGAAGCCATATGTGGCGAAATTCATTGACGGGGCAATAGCAGAAGCACGTTATGTATTTTGCTTCACATGCATTGTTAAGGAATTTGAAGAAGAAAGGGCTATGTTGGAAACAGAAAGGATAACTATCGAGCAACGTGTCAAAGATGCAAGACAAAGAGGTAAAGATATTCTAGCTAAAGTTGGTTCTTGGGAAAAGGAAATTGATAAGCTCAATCAAGCGGACACAAAAACAAAACAAACATGTTTCTTTGGATTGTGTCCTGATTGTATATGGCGATATCAAAAGGGAAAGGAGTTGGCAAATAACTTGGTGAAGATCAAACAACTACTAGAAAAGGTTGAGAAATTTGGAAATATTGAACTTCCTCACCCTGTTCCAGGTATTGAACGCCATTCAACTGAATATTACATTTCTTTTAAAAGCAGAGAGTCAAAATACAAAGAACTTTTAGATGCACTAAAAGATGACAAAAACTATATAATCGGATTGCACGGGATGCCAGGCACCGGAAAGACTGCATTGGCCATAAAAGTGGGTAAAGAACTAAAGCAATCTGAACAGTTTGCTTATGTCGTTGATACGACTGTGTCGTTTACTCCTGATATAGAAAAGATTCAAGATGAGATTGCTGGACCTTTAGGATTGAAATGGGAGGATTGTAATGAATCAGACCGACCCAAAAAACTATTGAGCAGATTAACAAATGGTGAAAAAATTCTTGTGTTACTGGATGATGTGTGGGATCTAGACCCACCACTTGATTTTGATGCAATAGGGATTCCAAAACAGGACAATCACAAAGGTTGTAGAGTTCTTGTAACCTCACGCAGTATAAAAACTTTCAACATAATGGATTGTGATAAGAGAATTGAGTTGGATGTTTTATCTAAAGAAGACGCATGGATCATGTTCAAAAGTTATGCCAGAATAAGTAATAGCACCTCTAAAAAATTGACCGATAAGGGACGTCAAATTGCAAAGCAATGCAAACAATTACCCATTGCAATTTCAGTTATCGCCAGCAGTTTAAAGGGCCAACAAAATCGAGAGCATGAGTGGGATGTGACATTGAAATCCTTGAAGCAGCCTGTATCCGTGCATGGTGTTGATGATCATGTGGTTGGAATTTATAACTGTTTGAAGATTAGCTATGATAATTTGAAGGATGAAAACACCAAGGTGTTGTTCCTCTTATGTTCGGTTTTTCGAGAAGATGAAGAATATTCTGTTGAAGATCTAACCAGACTTTGCATAGGAGTGGGTCTTTTTGCGGAAGATTATGGTAGCTATGATGATGCTCGAATCGAATTAGTTGTAGCCAAAAACGAGCTTGTAGATTCTTGTTTGTTGTTGGAGGACGGTGAAAAAAGTCTAAAAATGCATGATTTGGTTCGTGATGCAGCTCAATGGATAGCAAACAAAGAGATTCAATGTGTAAGATTGTTTGATAAAAAAGAAAAGTCATTGGTTGAAAACCAGACAAATATCAAACATTTATTATGTGAAGGGAAGTGCATGGATATTTTTAACTTGAAATTTGATGGTTCCAAACTTGAGACTTTAATTGTCAAGGTGGATAGAGATGATGACCGCAAACGTATAGAAGTTCCAGATTCTTTCTTTCAAAATGTTATCAAGCTTCGTGTTTTGAATTTTTCAGGAAATTATGGACGACCTTTATCATTACCAGACTCAATTCAGTCATTGTCCAATATTCGATCTGTGTTGGTTGATAGTGTGGATTTAGGTGACATCTCTATTTTGGGAAACCTACAAAGTCTAGAGACTCTTGATTTGGTTAAATGCAAAATCAGTGAATTCCCAAACCAAATTACAAAATTGGGGAAGTTTAAATTGTTGAAGTTGGAAGATTGCAAAATTAGAAAGAATAATCCATTTGAAGTTATTGAAAGATGCTCATCACTTGAAGAGTTTTATTTCAAAGATAGTACCAATGATTTTTGTCAGGAAATAACCTTACCTGTGTTGCAAAGATATCATATCAATAGAGGTGGGATGTTCTATTCTTCTTCAATGGAGATGGAGATAATCAATTTCCCAAAATATGTGGTGTTTCATGGAGGTAATGATGAAGAGTCTCATTTTTCAAAAGGAACACTCAAGTACTGCATGCAAACAGCAGAGGCTCTTTGGCTACATGGAATTAAGGAGGGGTGGAGAAATCTCATGCCTGAGATTGTTCCTGTAGATCTAGGTATGAATTTCCTTGTTGAACTTCATTTGTTTTGCATTTTACAATTAGAGTGTCTCATTGACACCATTGGTTCTCAAGTACCAAATGTCTTGTGCATGTTGGTTGTACTAGAACTGAAAGAAATGAAAAATATGGAAGAACTATCCAATGGACCCCTTTCCTTTGAATCTCTGAACAATTTAGAAAATCTATCAATCATGGATTGTGAACAGTTGCAAAGCTTGTTTAAAGGTAAGCTGAACCTCTGCAATCTAAAGGCCATCACACTTGAGAATTGCCCTATGTTAGTTTCCCTATTTGAAGTGTTAACTTCTCGAAGCCTAGTGCTACTAGAGACATTGAAAATAGCAAACTGTGAGAGACTGGAAACCATAATAGCAGATGCAAGAAGAGAGGATGAAGAAATAGATGACGGTGATAATAATAACAAGAGTCATGGTTCAATGTTTTCGAAACTAAAAGTTATTGATATTGAGAGATGTCACCGATTAGAATCTATACTACCTTTACTCTCTGCTCAAGACATTCCAGTACTAGAAACTATCAGAATAACAGAATGTGATGGATTGAAATATGTGTTTGATCAATCCCAAAATGTTGAACTTGTTTCGCTAAGTAAATTGATGCTCTCTAAATTACCAAACTTCATTGGTATTTTTGAAGAATGTTATGATCCCACGTCTTCATTTGTGAAGGGATCATCATCCACTTCCAATTATGGTTCCAAAGCACAAATACAATTGGATCATATCAAATGCAATATCTTCTCTTGGACTCATATATGTTGTCAAACCAGAATCCCATTGGCATCAGAATCAAATTCATATCGCCTTAACATATGGGAACGTGCTCAATGTCTTCCAATACAATCAAAGATCCTCTGCAATATTAAAGAGCTTGTATTGATTCATTTTCCGAAGATGAAATCAGTATCTATAGCTCCACTAATGCAGTTGGAAACTTTGAAAATTAAGTACTGTGATGAACTGAAGTACATAATAATAGACACCGGGGATCATAACACTGGTGGCAACAACTTGGTCAAGGTCTTCCCAAAATTGAAAGAGCTCTATGTTGAAGGTTGTGAGCAATTGGAATACATATTTGGACACGACACTAATGATCATCAAAACCACATGGAGATCCACCTTCATTTTCCAGAATTGAGAAGTCTTAGGCTTTTTTTTCTGATAAGTTTTGTTGCCATGTGTCCCAAACAGTATCGAACAACATTTCCTTCTCTGGGTAATACAATCATTAAGGAATTAAGTGGGAACGCGGAGCATTTTCTCACATTGGAAATGCTTCAGTTACACTATTGCACAGTAGAAAATATATTTTCTCTCAGTGAAGTAAATGTACAGCCACAACTGGACTTAGGTTTGCAAGACATTGAGTTGCATGATCTGCCTATGATGACTTGTCTTTTTGTGGGTCCCAAAAATTCATTTGTCCTCAAAAACCTTGCACGCATAGATATTGTGCGATGTGAAGAATTGAAAATTGCATTCTCCACTTCCATTTTAAGATTCCTACCGCAGTTGATTTATATAACAATAGAAGAATGCAAAGAGTTGGAACATATTATTGAAGATGATGATGATGATTTGGAGAACAACAAAAATACAAATTCTTCAAGAACATGCTTCCCAAAGCTAGAAGGACTTTCTGTTATAAATTGCAACAAGTTGATATCTGTCCTCCCATTCTCTGTATGTAAAGAGCTTCCGAAGCTAAATGTTCTGTTGATAACAGAAGCAAATGAGTTAGAAGAAATATTCAAAAGTCAAGATGATCACAAAGTTGATATCCCAAATCTAAAAATTGTAGCATTTGATAAGCTACCAAGCCTCCGTTATACCCAGGGAAATCAATTTCAGGCTGTAGAAAATCGCTATGTACAGAATTGTCAAAAACTCACTCTGACTTCGGCATCAACAACCAACATCTTTGAGGAAATTACTGAATTATGTCGAATAAGTACACGTTTTGATTTGTATATGAATGTGAAAAATCTATTTGAACAAATAGTAAGTGCAGAAACCACTGAAGAAACCACTGAAATTTTTGAAAATGCTGGGATTGAACAACTGCCAAGTGCAAAAATCACTGAAGATTTTGAAGTACCAGTTGTTAACAATTTTCTGTATTTAACAATACTACCAACAAATTCAAAATTGGAGGGATCAACATCAGAAAAAACAGAAGTTGCAACTGTGTCTACCATTTCAGGAACAAAGAATGAGCCACCTATACAGGATATTGAGATAGAAGGAACTTCTAAGACTAATAACGATCAAGATTCTCTAAATGATAATGCTTTGATGAAAGTAAACTCAAATGCTGAGGAACAATTTTCTAAGGGTGATGAAATAATTGTTTCCAAATCTAAACCCTCTCTTAACATCACATCTCCTATTGCTTCTCCGTTCCCTTCAATGCCTTCTATAGGGGATCCTTCTCAAAAAGTAGAAGATTTAGCAATTCTAACAACAAAATCTAAAATACAAATGAAACAAACACCTGAGGCAGATCATGAATTTGTTGAAAATGTTCCGGATTCAGAAATACTACCAACAAATTCAAAAATACAAATGAAACAAACACCTGAGGCAGAGCATGAATTTGTTGAAAAATTTCCAAATTTAGCAATACTACCAACAAATTCAGAAGAGTTGTTGAATGATCAATTGGAGGCCTCAACATCAGAAAAAACAGCATTTGCAACTGTGTCTACCATTTCAGGAACAAAGAACGAGCCACCTAAACAAAAGGGTATTGAGAAAGAAGGAGTTTCTAAGACTAATATTGATCAAGTTTCTCTAAATGATGACGCTTTCATGAAAGTAAACTCAACTGTTGAGGAACAGTTTTCTAAGGATGATGAAATAATAGTTTCCAAATCGAAACCCTCTCCTAGCATCACATCTCCTATTGCATCTCAGTTCCCTTCAGTGTCTTCTAATGGGGGGCCTTCTCAAAAAGTAGAAGATTTAAGTTCATCTTTGCTTGTCAAGAGGGAGCTTGAGGAACTGGTCTCCAAGAATCATTTGGATTATCTGAACTTGCCTTTGTTAACTGATTTTCTTGTTAAGAATCCTTCTGTTCATTTAAAGGACACTTCACTTCCTAATAGATACAAGGGTTGTGCCTACAACTTACTGGCCGAGCTATTGCAATTCCTCGAAACCCATAGTTTAGTTGAAGTATCGGGCTCACGCCACTCTGAATTTGTGGAGCTATTACAAGATGCGCGCTACTTTGCTTTTGATAAGGAATGGTTGGATGGTGTTGAGAGGCGTGCTTTATTTCCAGAAATACAAGTATCTCCAGATGCTTTGGAAAAATTATTGCATTCCAAGAAACAGGTTACCAAGGATGTTGAAGATTTGCGTTTCAAGATACACATTTTAAGTCAACATGTGGAAGATCTTAAGCATCAATTGATATCCTCTGAAGCTGTTTTGGAGAGTATCATTCAACAAGAAGCGGTTCTTAGTGCCCCTATTGGCTATTAG 5760 0.3622 MASFLLDLMKPYVAKFIDGAIAEARYVFCFTCIVKEFEEERAMLETERITIEQRVKDARQRGKDILAKVGSWEKEIDKLNQADTKTKQTCFFGLCPDCIWRYQKGKELANNLVKIKQLLEKVEKFGNIELPHPVPGIERHSTEYYISFKSRESKYKELLDALKDDKNYIIGLHGMPGTGKTALAIKVGKELKQSEQFAYVVDTTVSFTPDIEKIQDEIAGPLGLKWEDCNESDRPKKLLSRLTNGEKILVLLDDVWDLDPPLDFDAIGIPKQDNHKGCRVLVTSRSIKTFNIMDCDKRIELDVLSKEDAWIMFKSYARISNSTSKKLTDKGRQIAKQCKQLPIAISVIASSLKGQQNREHEWDVTLKSLKQPVSVHGVDDHVVGIYNCLKISYDNLKDENTKVLFLLCSVFREDEEYSVEDLTRLCIGVGLFAEDYGSYDDARIELVVAKNELVDSCLLLEDGEKSLKMHDLVRDAAQWIANKEIQCVRLFDKKEKSLVENQTNIKHLLCEGKCMDIFNLKFDGSKLETLIVKVDRDDDRKRIEVPDSFFQNVIKLRVLNFSGNYGRPLSLPDSIQSLSNIRSVLVDSVDLGDISILGNLQSLETLDLVKCKISEFPNQITKLGKFKLLKLEDCKIRKNNPFEVIERCSSLEEFYFKDSTNDFCQEITLPVLQRYHINRGGMFYSSSMEMEIINFPKYVVFHGGNDEESHFSKGTLKYCMQTAEALWLHGIKEGWRNLMPEIVPVDLGMNFLVELHLFCILQLECLIDTIGSQVPNVLCMLVVLELKEMKNMEELSNGPLSFESLNNLENLSIMDCEQLQSLFKGKLNLCNLKAITLENCPMLVSLFEVLTSRSLVLLETLKIANCERLETIIADARREDEEIDDGDNNNKSHGSMFSKLKVIDIERCHRLESILPLLSAQDIPVLETIRITECDGLKYVFDQSQNVELVSLSKLMLSKLPNFIGIFEECYDPTSSFVKGSSSTSNYGSKAQIQLDHIKCNIFSWTHICCQTRIPLASESNSYRLNIWERAQCLPIQSKILCNIKELVLIHFPKMKSVSIAPLMQLETLKIKYCDELKYIIIDTGDHNTGGNNLVKVFPKLKELYVEGCEQLEYIFGHDTNDHQNHMEIHLHFPELRSLRLFFLISFVAMCPKQYRTTFPSLGNTIIKELSGNAEHFLTLEMLQLHYCTVENIFSLSEVNVQPQLDLGLQDIELHDLPMMTCLFVGPKNSFVLKNLARIDIVRCEELKIAFSTSILRFLPQLIYITIEECKELEHIIEDDDDDLENNKNTNSSRTCFPKLEGLSVINCNKLISVLPFSVCKELPKLNVLLITEANELEEIFKSQDDHKVDIPNLKIVAFDKLPSLRYTQGNQFQAVENRYVQNCQKLTLTSASTTNIFEEITELCRISTRFDLYMNVKNLFEQIVSAETTEETTEIFENAGIEQLPSAKITEDFEVPVVNNFLYLTILPTNSKLEGSTSEKTEVATVSTISGTKNEPPIQDIEIEGTSKTNNDQDSLNDNALMKVNSNAEEQFSKGDEIIVSKSKPSLNITSPIASPFPSMPSIGDPSQKVEDLAILTTKSKIQMKQTPEADHEFVENVPDSEILPTNSKIQMKQTPEAEHEFVEKFPNLAILPTNSEELLNDQLEASTSEKTAFATVSTISGTKNEPPKQKGIEKEGVSKTNIDQVSLNDDAFMKVNSTVEEQFSKDDEIIVSKSKPSPSITSPIASQFPSVSSNGGPSQKVEDLSSSLLVKRELEELVSKNHLDYLNLPLLTDFLVKNPSVHLKDTSLPNRYKGCAYNLLAELLQFLETHSLVEVSGSRHSEFVELLQDARYFAFDKEWLDGVERRALFPEIQVSPDALEKLLHSKKQVTKDVEDLRFKIHILSQHVEDLKHQLISSEAVLESIIQQEAVLSAPIGY* 1920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1546 1919 Gene3D Ribonuclease Inhibitor 473 675 IPR032675 -
Tpr5g1546 1919 MobiDBLite consensus disorder prediction 1716 1739 - -
Tpr5g1546 1919 PANTHER - 60 969 - -
Tpr5g1546 1919 PANTHER - 1283 1368 - -
Tpr5g1546 1919 SUPERFAMILY L domain-like 468 964 - -
Tpr5g1546 1919 Gene3D - 140 302 IPR027417 -
Tpr5g1546 1919 SMART AAA_5 166 305 IPR003593 -
Tpr5g1546 1919 SUPERFAMILY RNI-like 1170 1334 - -
Tpr5g1546 1919 Coils Coil 34 61 - -
Tpr5g1546 1919 CDD AAA 155 303 - -
Tpr5g1546 1919 Gene3D - 303 397 IPR042197 -
Tpr5g1546 1919 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1283 1368 - -
Tpr5g1546 1919 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 60 969 - -
Tpr5g1546 1919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 408 IPR027417 -
Tpr5g1546 1919 Gene3D Ribonuclease Inhibitor 1003 1416 IPR032675 -
Tpr5g1546 1919 Gene3D Ribonuclease Inhibitor 726 875 IPR032675 -
Tpr5g1546 1919 Pfam NB-ARC domain 156 395 IPR002182 GO:0043531
Tpr5g1546 1919 PRINTS Disease resistance protein signature 169 184 - -
Tpr5g1546 1919 PRINTS Disease resistance protein signature 242 256 - -
Tpr5g1546 1919 PRINTS Disease resistance protein signature 338 352 - -
Tpr5g1546 1919 PRINTS Disease resistance protein signature 598 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1546 Tpr-Chr5 29510388 29523930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1546 170 509 WRKY Transcription Factor Family AT5G45050 25.141 2.38e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1546 - - cam:101500233 1563.9