LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g1545	ATGGCAAGTTTCCTCTGTGATTTGGTGAAGAAATATGTGGACAAATTGATTGATGGCGCAATAGCAGAAGCACGTTATGTATTTTGCTTTACATGCATTGTTAAGAAATTTGAAGAAGAAAGAACTACGTTGGAACCACAAAGGATAACTATCGAGCAACGTGTCAAAGATGCAAGAGAAAGAGATAAAGATATTCAAGCTATAGTTAGTTCTTGGGAAAAAGATATTGATGAGCTCAATCAAGTGGACACAAAAACAAAACAAACATGTTTTTTTGGATTTTGTCCTAATTGTATCTGGCGATATAAAAAGGGAAAGGAGTTATCAAATAACTTGGAGAAGATCAAACAACTAAAGGGAGAGAAATTTGAAAATATTGAACTTCCTCGCCCTGTTCCAGGTGTTGAACGCTATTCATCCAAAGATTACATTTCTTTTGAAAGTAGAGAGTCAAAATACAAAGAACTGTTGGATGCATTAAAAGATGACAATAACTATATAACCGGATTGCAAGGGATGGGGGGCACCGGAAAGACAACAATGGCCAAAGAAGTGGGTAAAGAGCTAAAGCAATCTGAAATATTTGCTTATGTCGTTGATACGACCGTGTCATTTACTCCTGATATAAAAAAAATTCAAGATGATATTGCTGGATCTTTAAGACTGGAATGGGGGGGTTGTAATGAACCAGACCGACCCAAAAAACTATGGAGTAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCGAGGCCTGCCTCTTGATTTTGATGCAATAGGAATTCCAAAACAAGACACACACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAATCAAGAAACTTTCAACAACATGGACTGTGATAAGATAATTGAATTGGGTCTTTTATCAGAAGAAGAAGCGTGGATCATGTTCAAAATGTATGCCAAGATAAGTGATAGCACCTCTCAAAAATTGATCGATAAGGGACGTAAAATTGCAAAGGAATGCAAACGATTACCTGTTGCAATTTCAGTTATCGCCAGTAGCTTAAAGGGCCACCAACATCGAGAGCACAAATGGGATGTGACATTGAAATCCTTGAAGAAGCCTGTATCCATGCATGGTGTTGATGATGATAAGGTTGGAATTTATAACTTGTTGAAGATTAGCTATGATAATTTGAAGGATGAAAAAGCCAAGGGGTTGTTTCTCTTATGTTCGGTTTTCCGAGAAGATGAAGAAAATTCTATTGAAGTTATAACAAGACTTTGCATAGGTGTGGGCCTTTTGGGGGAAGATTATGGTAGCTACGATGATGCTCGAAACCTAGTAGTTCTAGCCAAAGACAAGCTCGTAGATTCTTGTTTGTTGTTGGAGGGCGGTGAAAAATGTCTAAAACTGCATGATTTGGTCCGAGAAGCAGCTCAATGGATAGCGAACAAAGAGATTCAATGTGTAAAATTGTTTGATGAAAAGCAAAAGTCATTGGTTGAAAAGCAGACAAATATCAAATATTTATTATGTGAAGGGAAGTGCAAGGATTTATTTTCCTTGGAATTTGATAGCTTGAAACTTGAGACTTTAATTGTCAAGGTGGATAGAGAAGAAGAGGATAAATGTATAAAAGTACCAGATTCTTTCTTTGAAAATGTTATCAGGCTCCGTGTTTTGAATTTTTCAGGCATTCATTTCAGCCAATCTTTATCATTACCACCTGCAATTCAGTTATTGACAAATATTCGATCTATGTCGTTTGATCATGTTGATTTAGGTGATATCTCTATTTTGGGAAAACTACAGAGACTTGAGACTCTTGATTTGGATAGATGCAAAGTCAATGAATTGCCAAACCAAATTACAGAACTGAAGAAGTTTAAATTGTTGAAGTTGGAATTTTGTGAAATTAGAATGAAAAATCCATTTGAGGTTATTAAAGGATGCTCATCACTTGAAGAGTTGTATTTCAAATATAGTTTCAATGAATTTTGTAAGGAAATAGCCTTACCTGAGTTGAAAAGATATCATATCCATGGTAGAGGTTCCTTTTATTTGGAAAGACAATCCAGGTTTTCCAAATATGTTGTGTTTCGTGGTGATGAAAAGTGTCAATTTTCAGAAGAAACGCTCAAGTACTGCATGCAAACAGCAGAGGCTCTTTTTCTAGAAGGAATTAAGGGGGAATGGAGAAATCTCATGCCTGAGATTTTTCCTTTAGAACACGGTATGAATGATCTTGTTGAACTTCATTTGGATCGGATTTCACAACTACGGTGCCTCATTGACACCATTGGTTCTCATGTACCGATCTTGTCCAACTTGGTTGTACTAGAACTGAAAAACATGAAAAATTTGGAACAACTATTCAATGGTAAGGCAAACCTCTGCAATCTAAAGAGCATCAAAGTTGAGAATTGCCCTATGTTAGTTTCTATACTACCTTTCCTCTCTGCTCAAGACCTTCCAGTACTAGAAGCTATCACAATAAGAAAATGTGATGGATTGCAATATGTGTTTGGTCAATCTCAACATGTTGAACTGGTTTCACTAACTGAATTGGAGCTCTCTGAATTACCAAACTTCATTGGTATTTTTGAAGAATGTGTGAAGGGATCATCTTCCACTTCCAAAGCACAAATACAATTGGATCCTATGCGTGATAGGGATCAACCGCATGACTGCTCAGTGGCATCGGAATCAAATTCATATGGCCTTAACATATGGGAACGTCTTGGAATACAATCAAAGATCCTCCGCAATATTAAAGAGATTGTGCTGACTCATTTTCCGAAGATGAAATCAGTATTTATCCTATCTATTGATCTAATAATGCAGTTGGAAACTTTGACAATTAAGAATTGTGATGAACTGAAGCACATAATAATAGATACTGGATATCATAACATTGGTGGCAACATCTGTGTCAATGTCTTCCCAAAATTGAAAGAGCTCTATGTTGAAGATTGTGCTCAATTGGAATACATATTTGGACATGACACTAGTGATCATCAAAACGATATGGGGATTCAGCTTCATCTTCCGGAATTGAGAGAACTCTATCTTACCAGTCTGCCAAGTTGGATCGCCATGTGTCCCAAACAATATCGAATAACATATCCTTGTTTGAAATATCTTCGTCTCTGGGAATGTTCCCAGGATAATACAATCATTAAGGAATTGAGTGGGAACGTTGATCATTTTCTTACTTTGGAAATCCTTGATTTATGCAATTCCAATGTAGAAAATATATTTTCCCTGAATGAAATTGATGAACAGCAACTGGACTTAGCTTTGCGATACATTGTCTTGATTGATCTGCCTATGATGACTTGTCTTTTTGTGGGTCCCAAATATTCATTTGCCCTCAAAAACCTTACAAGCATAACAATCATGCGATGTGACAAATTGAAAATTGCATTCTCCACTTCCATTTTAAGATTTCTACCACAGTTGTTTTATTTAACAATAGGAGAATGCAAAGAGTTGGAACATATTATTGAAGATCATGATGGTTTGGAAAATAAAAACAATTCAACAACATGCTTCCCAAAGCTAGAAGGACTTGCTGTTATAAAGTGCAACAAGTTGAAATTTGTCTTTCCATTCTCTGTATGTAAAGAGCTTCCGAAGCTAACTTTTCTGATGATAACAGAAGCAAATGAGTTAGAGAAAATATTCAAAAGTGAAGATGATCAGAAAGTTGATATTCCAAATCTAAATGTTTTAGTATTTGATATGCTGCCAAGCCTCTGTTGTGCTCAGGGAAATCAATTCCAGACTGTAAAAAATCGCTTCGTGCGGGATTGTCAACAACTCAAACTGACTTCAGCATCAACAACCAACACCTTCATAGAAATTGAAAAGTTACGTTACGTCATAGGTACACAATATATCCAATGTCTCAGTTTGATTTTACAAATATGTGATTTTTGTTTTACCTTTATATATTTTGATTTTATAATATTAATGCTTATCTATCTAATGATGTTCATAATGTATTTTTCTATAGATGATGATTTGTATGAGAAAGTGGAAGATCTATTTCACAAAGAATTTGATAAAGATTTTGATACTGAGTTGAATTTAGCAAGTGTTGAAATTGTTGAAAATGCTGGGATTGAACAACTGCCAAGTGCAAAAATCACTGAAGATTTTGAACTACCAGTTGATCAAGGGGATCCTTCTCAAAAAGTAGAAGATTTAGCAATTCTCTCAAAAATACAAATGAAACAAACACCAGAGACAGAGCATGAATTTGTTGAAAATGTTCCAGATTTAGCAATACTACCAACAAAATCAGGAGAGTTGCAGAATAAACAATCACTTGGAGAAACTGATACTACAGTCCAATCTTCTCAATTGGAGGGATCAACATCAGAAAAAACAGCAGTTGCAACTGTGTCTTCCATTTCAAGAACAAAGAATGAGCCACCAATGCAAGTAGTTACGTCTAAACAAAAGGGTATTGAGATAGAAGGAACTTCTAAGACTAATAATGATCAAGCTTCTCTAAATGGCGATGCTTTGATGAAAGTAAACTCATATGTTGAGGAACAATTTTTTAAGGATGATGAAATAATAGTTTCCAAATCTGAACCCTCTCCGAGCATCACATCTTTTGTTGCATCTAAAGGGGATCCTTCTCAAAAATTAGAAGATTTAGCAGTACTACCAACAAATTCAAAAATACAAATGAAACAAACACCAAAGGCAGAGCATGAGTTTGTTAAAAATGTTATGGATTTAGCAATACTACCAACAAATTCTGAAGAGTTGCTGAATGAACAATCACTTGGAGAAACTGATACTATCATCAAACCTTCTCAAGTAAATAATTTGGATGGATTAACATCAGAAAAAACAGCAGTTGCAACTATGTCCACCATTTCAGGAACAAAGAATGAGCCACCTATACAAGTGGTTGCTTCTAAACAAAAGGGTATTGAGGTTGAGATAGAAGGAGTTTCTAAGACTAATAATGATCAAGTTTCTTCAAATGGCGACGCTTTCATTAAAGTAAACTCAAATGTTGCCAGATCTAAACCCTCCTTTCCTAGCATCACATCTCCTATTGCATCTCAGGGTGACCCTTTTCTTGTCAAGAGGGAGCTTGAGGAACTGGTCTCCAAGAATCATTTGGATTATCAGAACTTGTCTTTGTTAACTGATTTTCTTGTTAATAATCCTTCTGTTCGTTTAAAAGACACTTCACTTGGTGATATATACAAGGGCTGTGCCTATAACTTCCTAGCTAAGCTATTGAAATTCCTCGAAACCCATAGTTTGCTGGAAGTATCAGGCTCGAGCCACTCTGAATTTGTGGAGCTATTACAAGTTGTGCGAAACTTTGCTTTTGATAAGGAATGGTTGGTTGGTGTCGAGAGGCGTGTTTTATTTCCTGAAATACAAGTATCTCAAGATGCCTTTGAAAAATTATTGGATTCCAAGAAACGGGTTGCTAAGGATGTTGAAGACTTGCGTTTGAAGATAGATTTTTTAAGTCAAGTGGCTGAAGATCTTAAGCATCAATTGACATCCTCTGAAGCTGTTTTGGAGAGTATCATTCAACAAGAGGCAATTTTAAGTGCCCCTATCGGTTATTAG	5601	0.3592	MASFLCDLVKKYVDKLIDGAIAEARYVFCFTCIVKKFEEERTTLEPQRITIEQRVKDARERDKDIQAIVSSWEKDIDELNQVDTKTKQTCFFGFCPNCIWRYKKGKELSNNLEKIKQLKGEKFENIELPRPVPGVERYSSKDYISFESRESKYKELLDALKDDNNYITGLQGMGGTGKTTMAKEVGKELKQSEIFAYVVDTTVSFTPDIKKIQDDIAGSLRLEWGGCNEPDRPKKLWSRLTNGDKILVILDDVWDRGLPLDFDAIGIPKQDTHKGCRVLVTSRNQETFNNMDCDKIIELGLLSEEEAWIMFKMYAKISDSTSQKLIDKGRKIAKECKRLPVAISVIASSLKGHQHREHKWDVTLKSLKKPVSMHGVDDDKVGIYNLLKISYDNLKDEKAKGLFLLCSVFREDEENSIEVITRLCIGVGLLGEDYGSYDDARNLVVLAKDKLVDSCLLLEGGEKCLKLHDLVREAAQWIANKEIQCVKLFDEKQKSLVEKQTNIKYLLCEGKCKDLFSLEFDSLKLETLIVKVDREEEDKCIKVPDSFFENVIRLRVLNFSGIHFSQSLSLPPAIQLLTNIRSMSFDHVDLGDISILGKLQRLETLDLDRCKVNELPNQITELKKFKLLKLEFCEIRMKNPFEVIKGCSSLEELYFKYSFNEFCKEIALPELKRYHIHGRGSFYLERQSRFSKYVVFRGDEKCQFSEETLKYCMQTAEALFLEGIKGEWRNLMPEIFPLEHGMNDLVELHLDRISQLRCLIDTIGSHVPILSNLVVLELKNMKNLEQLFNGKANLCNLKSIKVENCPMLVSILPFLSAQDLPVLEAITIRKCDGLQYVFGQSQHVELVSLTELELSELPNFIGIFEECVKGSSSTSKAQIQLDPMRDRDQPHDCSVASESNSYGLNIWERLGIQSKILRNIKEIVLTHFPKMKSVFILSIDLIMQLETLTIKNCDELKHIIIDTGYHNIGGNICVNVFPKLKELYVEDCAQLEYIFGHDTSDHQNDMGIQLHLPELRELYLTSLPSWIAMCPKQYRITYPCLKYLRLWECSQDNTIIKELSGNVDHFLTLEILDLCNSNVENIFSLNEIDEQQLDLALRYIVLIDLPMMTCLFVGPKYSFALKNLTSITIMRCDKLKIAFSTSILRFLPQLFYLTIGECKELEHIIEDHDGLENKNNSTTCFPKLEGLAVIKCNKLKFVFPFSVCKELPKLTFLMITEANELEKIFKSEDDQKVDIPNLNVLVFDMLPSLCCAQGNQFQTVKNRFVRDCQQLKLTSASTTNTFIEIEKLRYVIGTQYIQCLSLILQICDFCFTFIYFDFIILMLIYLMMFIMYFSIDDDLYEKVEDLFHKEFDKDFDTELNLASVEIVENAGIEQLPSAKITEDFELPVDQGDPSQKVEDLAILSKIQMKQTPETEHEFVENVPDLAILPTKSGELQNKQSLGETDTTVQSSQLEGSTSEKTAVATVSSISRTKNEPPMQVVTSKQKGIEIEGTSKTNNDQASLNGDALMKVNSYVEEQFFKDDEIIVSKSEPSPSITSFVASKGDPSQKLEDLAVLPTNSKIQMKQTPKAEHEFVKNVMDLAILPTNSEELLNEQSLGETDTIIKPSQVNNLDGLTSEKTAVATMSTISGTKNEPPIQVVASKQKGIEVEIEGVSKTNNDQVSSNGDAFIKVNSNVARSKPSFPSITSPIASQGDPFLVKRELEELVSKNHLDYQNLSLLTDFLVNNPSVRLKDTSLGDIYKGCAYNFLAKLLKFLETHSLLEVSGSSHSEFVELLQVVRNFAFDKEWLVGVERRVLFPEIQVSQDAFEKLLDSKKRVAKDVEDLRLKIDFLSQVAEDLKHQLTSSEAVLESIIQQEAILSAPIGY*	1867

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g1545	1866	SUPERFAMILY	L domain-like	466	1164	-	-
	Tpr5g1545	1866	Gene3D	-	301	390	IPR042197	-
	Tpr5g1545	1866	Coils	Coil	1822	1842	-	-
	Tpr5g1545	1866	Gene3D	Ribonuclease Inhibitor	1011	1234	IPR032675	-
	Tpr5g1545	1866	PANTHER	-	80	839	-	-
	Tpr5g1545	1866	PANTHER	-	1076	1240	-	-
	Tpr5g1545	1866	Pfam	NB-ARC domain	154	393	IPR002182	GO:0043531
	Tpr5g1545	1866	PANTHER	AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED	80	839	-	-
	Tpr5g1545	1866	PANTHER	AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED	1076	1240	-	-
	Tpr5g1545	1866	Gene3D	Ribonuclease Inhibitor	475	683	IPR032675	-
	Tpr5g1545	1866	Gene3D	-	130	298	IPR027417	-
	Tpr5g1545	1866	MobiDBLite	consensus disorder prediction	1434	1499	-	-
	Tpr5g1545	1866	Gene3D	Ribonuclease Inhibitor	730	1010	IPR032675	-
	Tpr5g1545	1866	PRINTS	Disease resistance protein signature	167	182	-	-
	Tpr5g1545	1866	PRINTS	Disease resistance protein signature	240	254	-	-
	Tpr5g1545	1866	PRINTS	Disease resistance protein signature	336	350	-	-
	Tpr5g1545	1866	PRINTS	Disease resistance protein signature	597	613	-	-
	Tpr5g1545	1866	Gene3D	-	391	474	IPR036388	-
	Tpr5g1545	1866	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	137	406	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g1545	Tpr-Chr5	29491561	29502556	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g1545	169	507	WRKY Transcription Factor Family	AT5G45050	26.346	2.72e-13	73.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g1545	-		-	mtr:MTR_3g062320	1110.9