Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1541 ATGGCAAGTATCCTCTGTGATTTGGTGAAGAAATATGTGGACAAATTGATTGATGGCGCAATAGCAGAAGCACGTTATGTATTTTGCTTTACATGCATTGTTAAGAAATTTGAAGAAGAAAGAACTACGTTGGAACCACAAAGGATAACTATCGAGCAACGTGTCAAAGATGCAAGAGAAAGAGATAAAGATATTAAAGCTATAGTTGGTTCTTGGGAAAAAGATATTGATGAGCTCAATCAAGTGGACACAAAAACAAAACAAACATGTTTTTTTGGATTTTGTCCTAATTGTATCTGGCGATATAAAAAGGGAAAGGAGTTATCAAATAACTTGGAGAAGATCAAACAACTAAAGGGAGAGAAATTTGAAAATATTGAACTTCCTCGCCCTGTTCCAGGTGTTGAACGCTATTCATCCAAAGATTACATTTCTTTTGAAAGTAGAGAGTCAAAATACAAAGAACTGTTGGATGCATTAAAAGATGACAATAACTATATAACCGGATTGCAAGGGATGGGGGGCACCGGAAAGACAACAATGGCCAAAGAAGTGGGTAAAGAGTTAAAGCAATCTGAAATATTTGCTTATGTCGTTGATACGACCGTGTCATTTACTCCTGATATAAAAAAAATTCAAGATGATATTGCTGGATCTTTAAGACTGGAATGGGGGGGTTGTAATGAACCAGACCGACCCAAAAAACTATGGAGTAGATTAACAAATGGTGACAAAATTCTTGTGATACTGGATGATGTGTGGGATCGAGGCCTGCCTCTTGATTTTGATGCAATAGGAATTCCAAAACAAGACACACACAAAGGTTGTAGAGTTCTTGTAACCTCGCGTAATCAAGAAACTTTCAACAACATGGACTGTGATAAGATAATTGAATTGGGTCTTTTATCAGAAGAAGAAGCGTGGATCATGTTCAAAATGTATGCCAAGATAAGTGATAGCACCTCTCAAAAATTGATCGATAAGGGACGTAAAATTGCAAAGGAATGCAAACGATTACCTGTTGCAATTTCAGTTATCGCCAGTAGCTTAAAGGGCCACCAACATCGAGAGCACAAATGGGATGTGACATTGAAATCCTTGAAGAAGCCTGTATCCATGCATGGTGTTGATGATGATAAGGTTGGAATTTATAACTTGTTGAAGATTAGCTATGATAATTTGAAGGATGAAAAAGCCAAGGGGTTGTTTCTCTTATGTTCGGTTTTCCGAGAAGATGAAGAAAATTCTATTGAAGTTATAACAAGACTTTGCATAGGTGTGGGCCTTTTGGGGGAAGATTATGGTAGCTACGATGATGCTCGAAACCTAGTAGTTCTAGCCAAAGACAAGCTCGTAGATTCTTGTTTGTTGTTGGAGGGCGGTGAAAAATGTCTAAAACTGCATGATTTGGTCCGAGAAGCAGCTCAATGGATAGCGAACAAAGAGATTCAATGTGTAAAATTGTTTGATGAAAAGCAAAAGTCATTGGTTGAAAAGCAGACAAATATCAAATATTTATTATGTGAAGGGAAGTGCAAGGATTTATTTTCCTTGGAATTTGATAGATTGAAACTTGAGACTTTAATTGTCAAGGTGGATAGAGAAGAAGAGGATAAATGTATAAAAGTACCAGATTCTTTCTTTGAAAATGTTATCAGGCTCCGTGTTTTGAATTTTTCAGGCATTCATTTCAGCCAATCTTTATCATTACCACCTGCAATTCAGTTATTGACAAATATTCGATCTATGTCGTTTGATCATGTTGATTTAGGTGATATCTCTATTTTGGGAAAACTACAGAGACTTGAGACTCTTGATTTGGATACATGCAAAGTCAATGAATTGCCAAACCAAATTACAGAACTGAAGAAGTTTAAATTGTTGAAATTGGAAGATTGTGAAATAAGAATGAATAATCCATTTGAAGTTATTGAAAGATGCTCATCACTTGAAGAGTTGTATTTCAAATATAGTTTCAATGAATTTTGTAAGGAAATAGCCTTACCTGAGTTGAAAAGATATCATATCCATGGTAGAAGTTCCTTTTATTCGGAAGGACAATCCAGGTTTTCCAAATATGTTGTGTTTCGTGGTGATGAAAAGTGTCAATTTTCAAAAGGAACACTCAAGTACTGCATGCAAACAGCAGAGGCTCTTTTTCTAGAAGGAATTAAGGGGGAATGGAGAAATCTCATGCCTGAGATTTTTCCTTTAGAACACGGTATGAATGATCTTGTTGAACTTCATTTGGATCGGATTTCACAACTACGGTGCCTCATTGACACCATTGGTTCTCATGTACCGATCTTGTCCAACTTGGTTGTACTAGAACTGGAAAACATGGAAAATTTGGAACAACTATTCAATGGTAAGCTAAACCTCTGCAATCTAAAGAGAATCACACTTAAGAATTGCCCTATGTTAATTTCTATACTACCTTTCCTCTCTGCTAAAGACCTTCCAGCACTAGAAGCTATCAGAATAAGAAAATGTGATGGATTGCAATATGTGTTTGGTCAATCTCAACATGTTGAACTGGTTTCACTAACTGAATTGGAGCTCTCTGAATTACCAAACTTCATTGGTATTTTTGAAGAATGTGTGAAGGGATCATCTTCCACTTCCAAAGCACAAATACAATTGGATCCTATGCGTGATAGGGATCAACCGCATGACTGCTCAGTGGCATCGGAATCAAATTCATATGGCCTTAACATATGGGAACGTCTTGGAATACAATCAAAGATCCTCTGCAATATTAAAGAGATTGTGCTGACTCATTTTCCGAAGATGAAATCAGTATTTATCCTATCTATTGATCTAATAATGCAGTTGGAAACTTTGAGAATTGAGAAATGTGATGAACTGAAGCACATAATAATAGATACTGGATATCATAACATTGGTGGCAACATCTGTGTCAATGTCTTCCCAAAATTGAAAAAGCTCTATGTTGAAGATTGTGCTCAATTGGAATACATATTTGGACATGACACTAGTGATCATCAAAACGATATGGGGATTCAGCTTCATCTTCCGGAATTGAGATATCTCCATCTTGCCAGTCTGCCAAGTTTGATCGCCATGTGTCCCAAACAATATCGAATAACATATCCTTGTTTGAAATATCTTTGTATCTGGAAATGTTCCCAGGATAATACAATCATTAAGGAATTGAGTGGGAACATTGATCTTTTTCTCACTTTGGAAACACTCGACGTATTCAATTCCAATGTAGAAAGTATATTTTCCCTGAATGAAATTGATGAACAGCAACTGGACTTAGCTTTGCGATACATTACCTTGATTGATCTGCCTATGATGACTTGTCTTTTTGTGGGTCCCAAAAATTCATTTTCCCTCAAAAACCTTACACGCATAACAATCATGCGATGTGACAAATTGAAAATTGCATTCTCCACTTCCATTTTAAGATTTCTACCACAGTTGCGTATTTTAAGAATAGAAGAATGCAACGAGTTGGAACATATTATTGAAGATGATTTGGAGAATAAAAACAATTCAACAACATGCTTCCCAAAGCTAGAACTTCTTACTGTTAGAAAGTGCAACAAGTTGAAATTTGTTTTCTCCTCTTCCATGTTAAGAGTTCTACCAATGTTGCTTTATTTAACAATAGAAGAATGCAAAGAGTTGGAACATATTATTGAAGATGATTTGGAGAATAAAAACAATTCAACAACATGCTTCCCAAAGCTAAAAACACTTCTTATTATAAAGTGCAACAAGTTGAAATTTGTCTTTCCATTCTCTGTATGTAAAGAGGTTCCCGAGCTAACTTTTCTGATGATAACAGAAGCAAATGAGTTAGAGAAAATATTCAAAAGTGAAGATGATCAGAAAGTTGATATTCCAAATCTAAATGTTTTAGTATTTGATATGCTGCCAAGCCTCTGTTGTGCTCAGGGAAATCAATTCCAGGCTGTAAAAAATCGCTTCGTGCGGGATTGTCATCAACTCAAACTGACTTCAGCATCAACAACCAACACCTTCATAGAAATTGAAAAGTTATGTTACATCATAGATTATGATTTGCAGGAGAAAGTGGTAGATCTATTTAAACAGGGAACCACCAAAGATTTTGATACCGAGTCGAAGTTAGCAAGTGTTGAAATTGTTGAAAATGCTGGGATTGAACAACTGCCAAGTGCAAAAATCACTGAAGATTTTGAACTACCAGTTGATCAAGGGGATCCTTCTCAAAAAGTAGAAGATTTAGCAATACTACCAACAAACTCAAAAATTCAAATGAAACAAACACCAAAGACAGAGCATGAATTTGTTGAAAATGTTCCAGATTTAGCAATACTACCAACAAAATCAGGAAAGTTGCAGAATGAACAATCACTTGGAGAAACTGATACTACAGTCCAATCTTCTCAATTGGAGGGATCAACATCAGAAAAAACAGCAGTTGCAACTGTGTCTTCCATTTCAAGAACAAAGAATGAGCCACCAATGCAAGTAGTTACGTCTAAACAAAAGGGTATTGAGATAGAAGGAACTTCTAAGACTAATAATGATCAAGCTTCTCTAAATGGCGATGCTTTGATGAAAGTAAACTCATATGTTGAGGAACAATTTTCTAAGGATGATGAAATAATAGTTTCCAAATCTGAACCCTCTCCGAGCATCACATCTTCTGTTGCATCTAAAGGGGATCCTTCTCAAAAATTAGAAGATTTAGCAATACTACCAACAAATTCAAAAATACAAATGAAACAAACACCAAAGGCAGAGCATGAGTTTGTTAAAAATGTTATGGATTTAGCAATACTACCAACAAATTCTGAAGAGTTGCTGAATGAAAAATCACTTGGGGAAACTGATACTATCATCAAACCTTCTCAAGTAAATAATTTGGATGGATCAACATCAGAAAAAACAGCAGTTGCAACTATGTCCACCATTTCAGGAACAAAGAATGAGCCACCTATACAAGTGGTTGCTTCTAAACAAAAGGGACTGCAGGGTATTGAGGTTGAGATAGAAGGAGTTTCTAAGACTAATAATGATCAAGTTTCTCCAAATGGCGATGCTTTGATGAAAGTAAACTCAAATGTTGAGGAACAGTTTTCTAAGGATGATGAACTAATAGTTTCCAAATCTAAACCCTCATCTCCAATGCCTTCAATGCCTTCTAAAGGCAACCCTTCTCAAAAAGTAGAATTAAGTTCTTCTTTGCTTGTTAAGAGGGAGCTTGATGAGCTGGTCTCCAAGAATCATTTGAAGTATAAGAACTTGTCTTTGTTATCTGATTTTCTTGTTGCCAATCCATCTGTTTGTTTAAAGGACACTTCACTTAGTAATAGATACAAGGGATGTGCCTACAAATCACTAGCTAAGCTATTGAAATTCCTCAAAACCCATAGTTTGCTAGAAGTATCAGGCTCAAGCCACTCTGAATTTGTGGAGCTATTACAAGATGCGCGCAGCTTTGCTTTTGATAAGGAATGGTTGGATGGTGTTGAGAGGCGCGCTTTATTTCCTGAAATACAAGTATTTCCAGATGCCATGGAAAAGTTATTGGATTCTAAGAAAAAGATTACCAAGAATGTGGAAGATCTTAAGCATCAATTGACATCCTCTGAAGCTGATTTGGAGAGTATCATTCAACAAGAGGCAATTTTAAGTGCCCCTATTGGTTATTAG 5673 0.3607 MASILCDLVKKYVDKLIDGAIAEARYVFCFTCIVKKFEEERTTLEPQRITIEQRVKDARERDKDIKAIVGSWEKDIDELNQVDTKTKQTCFFGFCPNCIWRYKKGKELSNNLEKIKQLKGEKFENIELPRPVPGVERYSSKDYISFESRESKYKELLDALKDDNNYITGLQGMGGTGKTTMAKEVGKELKQSEIFAYVVDTTVSFTPDIKKIQDDIAGSLRLEWGGCNEPDRPKKLWSRLTNGDKILVILDDVWDRGLPLDFDAIGIPKQDTHKGCRVLVTSRNQETFNNMDCDKIIELGLLSEEEAWIMFKMYAKISDSTSQKLIDKGRKIAKECKRLPVAISVIASSLKGHQHREHKWDVTLKSLKKPVSMHGVDDDKVGIYNLLKISYDNLKDEKAKGLFLLCSVFREDEENSIEVITRLCIGVGLLGEDYGSYDDARNLVVLAKDKLVDSCLLLEGGEKCLKLHDLVREAAQWIANKEIQCVKLFDEKQKSLVEKQTNIKYLLCEGKCKDLFSLEFDRLKLETLIVKVDREEEDKCIKVPDSFFENVIRLRVLNFSGIHFSQSLSLPPAIQLLTNIRSMSFDHVDLGDISILGKLQRLETLDLDTCKVNELPNQITELKKFKLLKLEDCEIRMNNPFEVIERCSSLEELYFKYSFNEFCKEIALPELKRYHIHGRSSFYSEGQSRFSKYVVFRGDEKCQFSKGTLKYCMQTAEALFLEGIKGEWRNLMPEIFPLEHGMNDLVELHLDRISQLRCLIDTIGSHVPILSNLVVLELENMENLEQLFNGKLNLCNLKRITLKNCPMLISILPFLSAKDLPALEAIRIRKCDGLQYVFGQSQHVELVSLTELELSELPNFIGIFEECVKGSSSTSKAQIQLDPMRDRDQPHDCSVASESNSYGLNIWERLGIQSKILCNIKEIVLTHFPKMKSVFILSIDLIMQLETLRIEKCDELKHIIIDTGYHNIGGNICVNVFPKLKKLYVEDCAQLEYIFGHDTSDHQNDMGIQLHLPELRYLHLASLPSLIAMCPKQYRITYPCLKYLCIWKCSQDNTIIKELSGNIDLFLTLETLDVFNSNVESIFSLNEIDEQQLDLALRYITLIDLPMMTCLFVGPKNSFSLKNLTRITIMRCDKLKIAFSTSILRFLPQLRILRIEECNELEHIIEDDLENKNNSTTCFPKLELLTVRKCNKLKFVFSSSMLRVLPMLLYLTIEECKELEHIIEDDLENKNNSTTCFPKLKTLLIIKCNKLKFVFPFSVCKEVPELTFLMITEANELEKIFKSEDDQKVDIPNLNVLVFDMLPSLCCAQGNQFQAVKNRFVRDCHQLKLTSASTTNTFIEIEKLCYIIDYDLQEKVVDLFKQGTTKDFDTESKLASVEIVENAGIEQLPSAKITEDFELPVDQGDPSQKVEDLAILPTNSKIQMKQTPKTEHEFVENVPDLAILPTKSGKLQNEQSLGETDTTVQSSQLEGSTSEKTAVATVSSISRTKNEPPMQVVTSKQKGIEIEGTSKTNNDQASLNGDALMKVNSYVEEQFSKDDEIIVSKSEPSPSITSSVASKGDPSQKLEDLAILPTNSKIQMKQTPKAEHEFVKNVMDLAILPTNSEELLNEKSLGETDTIIKPSQVNNLDGSTSEKTAVATMSTISGTKNEPPIQVVASKQKGLQGIEVEIEGVSKTNNDQVSPNGDALMKVNSNVEEQFSKDDELIVSKSKPSSPMPSMPSKGNPSQKVELSSSLLVKRELDELVSKNHLKYKNLSLLSDFLVANPSVCLKDTSLSNRYKGCAYKSLAKLLKFLKTHSLLEVSGSSHSEFVELLQDARSFAFDKEWLDGVERRALFPEIQVFPDAMEKLLDSKKKITKNVEDLKHQLTSSEADLESIIQQEAILSAPIGY* 1891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1541 1890 Pfam NB-ARC domain 154 393 IPR002182 GO:0043531
Tpr5g1541 1890 Gene3D - 391 475 IPR036388 -
Tpr5g1541 1890 MobiDBLite consensus disorder prediction 1546 1561 - -
Tpr5g1541 1890 MobiDBLite consensus disorder prediction 1711 1728 - -
Tpr5g1541 1890 Gene3D - 301 390 IPR042197 -
Tpr5g1541 1890 MobiDBLite consensus disorder prediction 1448 1514 - -
Tpr5g1541 1890 MobiDBLite consensus disorder prediction 1545 1564 - -
Tpr5g1541 1890 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1174 1296 - -
Tpr5g1541 1890 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1077 1190 - -
Tpr5g1541 1890 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 82 838 - -
Tpr5g1541 1890 MobiDBLite consensus disorder prediction 1447 1514 - -
Tpr5g1541 1890 Gene3D - 130 298 IPR027417 -
Tpr5g1541 1890 Gene3D Ribonuclease Inhibitor 721 1010 IPR032675 -
Tpr5g1541 1890 PANTHER - 82 838 - -
Tpr5g1541 1890 PANTHER - 1174 1296 - -
Tpr5g1541 1890 PANTHER - 1077 1190 - -
Tpr5g1541 1890 SUPERFAMILY RNI-like 1097 1274 - -
Tpr5g1541 1890 SUPERFAMILY L domain-like 460 1050 - -
Tpr5g1541 1890 MobiDBLite consensus disorder prediction 1701 1728 - -
Tpr5g1541 1890 Gene3D Ribonuclease Inhibitor 476 682 IPR032675 -
Tpr5g1541 1890 Gene3D Ribonuclease Inhibitor 1036 1230 IPR032675 -
Tpr5g1541 1890 Coils Coil 1846 1880 - -
Tpr5g1541 1890 PRINTS Disease resistance protein signature 167 182 - -
Tpr5g1541 1890 PRINTS Disease resistance protein signature 240 254 - -
Tpr5g1541 1890 PRINTS Disease resistance protein signature 336 350 - -
Tpr5g1541 1890 PRINTS Disease resistance protein signature 597 613 - -
Tpr5g1541 1890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 406 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1541 Tpr-Chr5 29400142 29417282 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1541 168 507 WRKY Transcription Factor Family AT5G45050 26.271 1.27e-13 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1541 - - mtr:MTR_3g062320 1132.09