Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1538 ATGCCATTTTACTATATGGATGCTCACAGCTCTCACCACGGCCATATAATTGAAATCAGTGGAGATCTTCCTGATGCAGGAAGGAAGATTTGCGGCGAAGCACCATGTGGATTCTCAGATGCTGGATCCATCTCTCTGGATTCTAAGGAACGTTCGACCTCTATGCGAAAGCTTTTGGTAGCAGTGATCCTTTGTGTTATTTTCATGACCGTTGAATTAGTCGGTGGCATCAAAGCAAACAGTCTTGCAATATTGACCGATGCAGCACATTTGCTTTCTGATGTTGCAGCATTTGCAATCTCCTTGTTTTCTTTATGGGCTGCAGGATGGGAAGCTACTCCTCGTCAGTCATACGGATTTTACAGAATAGAGATTCTTGGTGCTTTGGTTTCTATTCAATTAATATGGCTGCTCACTGGGATTATTGTATATCAAGCCATTGATAGACTTATTACCGGTTCTCAAGAAGTCGATGGTTTTCTAATGTTTATAGTTGCAGCATTTGGTCTTGTGGTTAACATCATTATGGCTGTGTTATTAGGTCATGATCATGGACACGGTCATGGTCATGACCACGGACACGGTCATCATGGCCACAGCCACGGACTTACAGTTTCTACTCATGATCTTACAAAAGATGAGCACCACCATCATACTCATGAACATGGCCACGACACTCACCATCACAATGAAAACCACTCAAAAGATGCACATCATCATTCTCATGAAGGCCACATTCACCATCACGGCCAAGAAGGTGTTACCGAACCACTTCTCGGTGAATCAAAAGACAAGTCAAAGAAGAAGAGGAACATAAATGTGCAAGGCGCTTACCTCCACGTACTCGGCGACTCTATCCAGAGTGTTGGAGTAATGATTGGTGGAGCAGTCATATGGTATAAGCCTGAATGGAAAATAGTTGATTTAATTTGCACTCTTTTCTTTTCCTTAATCGTTTTGGGAACAACTATCAATATGCTGCGAAACATTTTGGAAGTTCTGATGGAAAGCACACCTCGCGAGATCGATGCTACTCAGCTTGAAAGAGGGATATTGGAAATGGAAGAGGTAGTAGCTGTTCATGAGCTGCACATTTGGGCCATTACAGTTGGGAAGGTTTTGCTAGCTTGTCATGTTAAAATCAACCGCGATGCCGATGCTGACATGGTGTTGGACAAAGTTGTTGACTACATCAGAAGGGTTTATAACATCAGTCATGTAACTATACAGATCGAGCGTTAG 1242 0.4275 MPFYYMDAHSSHHGHIIEISGDLPDAGRKICGEAPCGFSDAGSISLDSKERSTSMRKLLVAVILCVIFMTVELVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFYRIEILGALVSIQLIWLLTGIIVYQAIDRLITGSQEVDGFLMFIVAAFGLVVNIIMAVLLGHDHGHGHGHDHGHGHHGHSHGLTVSTHDLTKDEHHHHTHEHGHDTHHHNENHSKDAHHHSHEGHIHHHGQEGVTEPLLGESKDKSKKKRNINVQGAYLHVLGDSIQSVGVMIGGAVIWYKPEWKIVDLICTLFFSLIVLGTTINMLRNILEVLMESTPREIDATQLERGILEMEEVVAVHELHIWAITVGKVLLACHVKINRDADADMVLDKVVDYIRRVYNISHVTIQIER* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1538 413 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 341 412 IPR036837 -
Tpr5g1538 413 TIGRFAM CDF: cation diffusion facilitator family transporter 55 413 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tpr5g1538 413 MobiDBLite consensus disorder prediction 212 257 - -
Tpr5g1538 413 Gene3D Cation efflux protein transmembrane domain 54 334 IPR027469 -
Tpr5g1538 413 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 6 413 - -
Tpr5g1538 413 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 336 IPR027469 -
Tpr5g1538 413 Pfam Cation efflux family 58 335 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tpr5g1538 413 PANTHER METAL TOLERANCE PROTEIN A1 6 413 - -
Tpr5g1538 413 MobiDBLite consensus disorder prediction 212 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1538 Tpr-Chr5 29331153 29334827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1538 6 413 Inorganic Solute Cotransporters AT2G46800 71.463 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1538 K14689 - gmx:100794876 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1538 5 29331153 29334827 Tpr5g1538 5 29331153 29334827 ECH