Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1536 ATGGATGAAGAAATTGAATTAATCAAAAAAATGAATGAAACAGAGTTGAAAGAAGAGAAGAAGAACAATCATGATGATGATGATGGTGGTGATCAATCTAAAGAGGTTTTTAGATGGGAAATGCTTCTACCAAAGATTAATGTTACTGTTCTTCTTGTTGAATCTGATCGTTCTACTCGAAGATTAATCACTGCACTTCTCAAGAATTGCAGTTATAAAGTTATTGCGGTTTCTAATGGATTAAAGGCATGGGAGACGTTGAAGATGAAGGCAACTGACATTGATCTCATATTAACAGAAATGGAGTTGCCTGCAATATCTGGATTAGCACTCCTTTCTAAAATTATGGAGCATGAAATTTGCAAAAACATTCCCGTTATAATGATGTCTTCTCACGATTCACGTATCACGGCAATGAATTGCATGTTTAAAGGTGCAGCTGATTTTCTTATCAAACCTGTTCGGAAGAATGAGCTGACGAACTTATGGCAGCATGTATGGAGAAAACATGTTATTAACAGGCCTCTTCAAAATACAACATCTGCACAAAAGAATCTTAAAATTGCCACCGAAGATAATTTTGCTGGCAATCAATCAACTGATTCTGTTTCTGTGGCTTCCTCACAAAAAAATGATAAATGCAGCGGGAAATTGAGCGAGGCTCAAAGCACACATGCACTGCCATTTTCTGATGCTGAGAATGCATACATAGATAATATGCAAAATGCCTCTCAGATGAAGTGTTCTTTGAAGTTAAGCAACATTGATGTGGTGAAGCATGAAGAGTCTAACATAATTGCACGGGGATCTACTAAGTATAATGATGAAACAGGAGATTCAAGGCTAGAACAAGATTTCGGTACTGCTGAAATTGAACCCAAAAATGAAATACTTAGAGCTGAGTTAAGCAGAGAGAACCCTGATATTGATAGCGAGATACGCAGATGCAGTGATGAACTGATAGAACCTTCTAGAAGAGCAATTGACTTGATTTCCACATTTGGAAAATCAAACATGCAAGCAAGTGAATTTTCTGGCAGCTCATGCAAACAAGCAAGTGAATTTTCTGGCAGCTCATGCAAACAAGCAAGTGAAGCATCTGAGGAACGGCAAAGATTGAATCACTCAAATACTTCTGCCTTTTCCCGGTATGATGGTAGTAAGATGTCGCGGCCACTTTTTCAGAACCCCAATTGGAATTCTAATAAATCTCATGAATTATCTCTAGTAACTGCTGGTAATTGTTTTCAGTATAGTGGCTTAATTAAAACAGAGGATATGACTACTTCTGTAATGGCTCAGAATGGACAACTTGCACCAAAATTATTTAATATTGGACTCTTAGCTGATAATAGGTGGACTCCTAAATTAAATTGCCAAAGAGAGAGCTCTCCCTTTCCCTCGAGTTCCTCCTCCCAGTCCAATCCTGAAAGTCACAATTCAGACCATTGTCATAATTGCTCTTATGATGTTAACTTCAGTTTTCGTAATCAAGATGTTGTTGAAAAAATTGATTTGGATCATGTAGTGCATGATTCCCCTACAGCTGGTCAGGATTTTCATAATGAATTATGTCATGCTTCAAATCATATTAATGGTAGTGGTAATGTTGCAAGGGCTGCTTCAAATGCGGTTACTAAAAACGCTTCAAATCATATTAATGGTAGTGGCAATGTTGGAAGGGCTGCTTTAAATGCAAAGAACTCAAGAAGTTCTAGTGATGACAGGCGCTACAAACATGATTATTATGATTATGCTGATGAATTTAGATCGAGTGATTCTCAAAGATCCAGTCAAAGAGAAGCAGCTCTAACAAGGTTTCGATTAAAACGAAAAGAGAGATCCTTCGGGAAAAAGGTTCGATATGAGAGCCGGAAAAAACTGGCAGAGCAACGCCTTAGGGTGAATGGGCAGTTCGTACGAAAGGTACACAATGATGATCATCCAAACGCAGATGCTAGTGGTGGTGATCAATGA 1977 0.3804 MDEEIELIKKMNETELKEEKKNNHDDDDGGDQSKEVFRWEMLLPKINVTVLLVESDRSTRRLITALLKNCSYKVIAVSNGLKAWETLKMKATDIDLILTEMELPAISGLALLSKIMEHEICKNIPVIMMSSHDSRITAMNCMFKGAADFLIKPVRKNELTNLWQHVWRKHVINRPLQNTTSAQKNLKIATEDNFAGNQSTDSVSVASSQKNDKCSGKLSEAQSTHALPFSDAENAYIDNMQNASQMKCSLKLSNIDVVKHEESNIIARGSTKYNDETGDSRLEQDFGTAEIEPKNEILRAELSRENPDIDSEIRRCSDELIEPSRRAIDLISTFGKSNMQASEFSGSSCKQASEFSGSSCKQASEASEERQRLNHSNTSAFSRYDGSKMSRPLFQNPNWNSNKSHELSLVTAGNCFQYSGLIKTEDMTTSVMAQNGQLAPKLFNIGLLADNRWTPKLNCQRESSPFPSSSSSQSNPESHNSDHCHNCSYDVNFSFRNQDVVEKIDLDHVVHDSPTAGQDFHNELCHASNHINGSGNVARAASNAVTKNASNHINGSGNVGRAALNAKNSRSSSDDRRYKHDYYDYADEFRSSDSQRSSQREAALTRFRLKRKERSFGKKVRYESRKKLAEQRLRVNGQFVRKVHNDDHPNADASGGDQ* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1536 658 MobiDBLite consensus disorder prediction 461 481 - -
Tpr5g1536 658 SUPERFAMILY CheY-like 48 179 IPR011006 -
Tpr5g1536 658 ProSiteProfiles CCT domain profile. 600 642 IPR010402 GO:0005515
Tpr5g1536 658 Pfam Response regulator receiver domain 50 161 IPR001789 GO:0000160
Tpr5g1536 658 PANTHER TWO-COMPONENT RESPONSE REGULATOR 252 549 IPR045279 GO:0009736
Tpr5g1536 658 PANTHER TWO-COMPONENT RESPONSE REGULATOR 540 653 IPR045279 GO:0009736
Tpr5g1536 658 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 247 IPR045279 GO:0009736
Tpr5g1536 658 PANTHER PRR RESPONSE REGULATOR 33 247 - -
Tpr5g1536 658 PANTHER PRR RESPONSE REGULATOR 252 549 - -
Tpr5g1536 658 PANTHER PRR RESPONSE REGULATOR 540 653 - -
Tpr5g1536 658 SMART REC_2 48 163 IPR001789 GO:0000160
Tpr5g1536 658 ProSiteProfiles Response regulatory domain profile. 49 167 IPR001789 GO:0000160
Tpr5g1536 658 MobiDBLite consensus disorder prediction 361 384 - -
Tpr5g1536 658 Pfam CCT motif 600 642 IPR010402 GO:0005515
Tpr5g1536 658 Gene3D - 48 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1536 Tpr-Chr5 29299885 29305978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1536 595 649 Response Regulator Gene Family AT5G24470 69.091 1.29e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Tpr5g1536 Response_reg 3.7e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1536 K12130 - gmx:100791698 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1536 5 29299885 29305978 Tpr5g1536 5 29299885 29305978 ECH
Tpr5g1536 5 29299885 29305978 Tpr6g0025 6 301971 307049 ECH