Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1528 ATGTTCATCACCTCAACAACAACAACACCACCAACAACAACACCTCAACCTCCATCTCAATCTCCATCTTCACCACCACCACCACCACCACCACCTCAACCTCCATCTCAACCACCCATACCACCTCCATCTCCCACAGGACCTACACCAGATCTATCCCCCCACACCATCTCCATCTCCAACAATGATCAAGAAGATGAAATTGTTCCGGAATCATTAACAACAACACCACCAACAACAACACCTCAACCTCCATCTCAATCTCCATCTTCACCACCACCACCACCACCTCAACCTCCATCTCAACCACCCATACCACCTCCATCTCCCACAGGACCTACACCAGATCTATCCCCCCACACCATCTCCATCTCCAACAATGATCAAGAAGATGAAATTGTTCCGGAAGCTCCAACATCCATCACTCCTACTACTACTACTACCTTCAGGCAAAGGGCCCAAACATTCACAATTGCCATATTCCTGCAATTGTTGTTTGCCCTTTTGAACTTATTTGCCAAGCTGTCGATGGATGACGGGAGGAGCAGTTTTGTCTTCGTTGCCTATCGAAGTATAGTGGCATTTATGGTTGTAACACCATTTGCATTATACTTTCAATGGAATCAATTGCCAAAAATTACAACAGGAATATTCTTTAGGATATTGGCAACTAGTCTGCTAGGGCTTTTGGATCAAAATTTGTACTTGTTGGGGATGAAATACACCACAGCAACCTACGCGACTGCCATGAGCAATTTGCTCCCTGTTATCACATTCATTTTGGCTTGTATTCACAGGACCGAAACTATCAACCTAGGATCTAGACGACACCAAGCAAAGGTGTTAGGCACAATACTTATTGTTTTGGGTGCCATGGTGATGACAATGGTTAAAGGTTCCATACTGTTTGGGACAGTTGGAGCCATTAACCACGGTCATCATGGTGGTTCTCATACAATAGTTGGATTGATCTTCATCTTATTAGGGTGTACATCTTTTGCTTATTCCAGTATCCTCCAAACTATCCTCATTAATGAGTACCACTTCCCAGCACTCTCCCTTGTTTCAACTAATTCCTTTTTGGGGAGTATTGGAGGGCTAATAGTCGCTTGGATTGTAGAAAGTCGATCTTCTTATACAGTATGGACGATCTTTAGATGGGATCTGACATTACTGTCTATCATTTATGCGGTATGA 1197 0.4378 MFITSTTTTPPTTTPQPPSQSPSSPPPPPPPPQPPSQPPIPPPSPTGPTPDLSPHTISISNNDQEDEIVPESLTTTPPTTTPQPPSQSPSSPPPPPPQPPSQPPIPPPSPTGPTPDLSPHTISISNNDQEDEIVPEAPTSITPTTTTTFRQRAQTFTIAIFLQLLFALLNLFAKLSMDDGRSSFVFVAYRSIVAFMVVTPFALYFQWNQLPKITTGIFFRILATSLLGLLDQNLYLLGMKYTTATYATAMSNLLPVITFILACIHRTETINLGSRRHQAKVLGTILIVLGAMVMTMVKGSILFGTVGAINHGHHGGSHTIVGLIFILLGCTSFAYSSILQTILINEYHFPALSLVSTNSFLGSIGGLIVAWIVESRSSYTVWTIFRWDLTLLSIIYAV* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1528 398 MobiDBLite consensus disorder prediction 11 50 - -
Tpr5g1528 398 MobiDBLite consensus disorder prediction 1 115 - -
Tpr5g1528 398 PRINTS Proline rich extensin signature 6 18 - -
Tpr5g1528 398 PRINTS Proline rich extensin signature 18 39 - -
Tpr5g1528 398 PRINTS Proline rich extensin signature 39 55 - -
Tpr5g1528 398 PRINTS Proline rich extensin signature 73 98 - -
Tpr5g1528 398 MobiDBLite consensus disorder prediction 51 76 - -
Tpr5g1528 398 PANTHER WAT1-RELATED PROTEIN 150 397 - -
Tpr5g1528 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 190 297 - -
Tpr5g1528 398 Pfam EamA-like transporter family 159 295 IPR000620 GO:0016020|GO:0016021
Tpr5g1528 398 PANTHER WAT1-RELATED PROTEIN 150 397 IPR030184 GO:0016021|GO:0022857
Tpr5g1528 398 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1528 Tpr-Chr5 29187900 29194643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1528 151 397 Nodulin-like Gene Family AT2G37460 43.750 1.04e-47 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1528 - - cam:101496299 208.379