LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g1523	ATGGCTCCCCATATTTCTCAATGCACGTTGTTCTCTTACATTTCACTCTTTCACTTCATTTTCATCACATTGGCTCAATCTGATAACTACATCATTCATATGAACTTATCAGCCATGCCCAAAGCATTCTCAAGTCATCACACTTGGTATCTATCAACTCTTTCCTCTGCATTAGAGAATTCTCAACTCGCAACAACCGATAATCACAATTCTCCAATTTCATCTAAGTTAATTTACACCTACACACATGCCATGAATGGTTTCAGTGCTAATTTGTCACCTAAAGAATATGAATCTCTCAAAAACTCCCTTGGTTACATTTCTTCAATACCCGATTTACCTTTGAAGCTTGACACAACACACTCACCTCAATTTCTTGGTCTCAATCCAAACAAAGGTGCTTGGCATGATTCAAATTTTGGTCAAGATGTCATCATTGGTTTGGTTGACACAGGTGTTTGGCCAGAAAGCGAAAGCTTCAAGGATAATGGAATCACTAACATTCCTTCAAAATGGAAAGGACAATGTGAAAATAGCATTCATTTCAATTCATCACTTTGCAACCAGAAACTCATTGGTGCAAAATTTTTCAACAAAGGTATATTAGCTAAATATCCAAACATCACCTTAGGATTAAATTCCACACGCGATACAACAGGTCATGGGACTCACACGTCGTCAACAGCAGCTGGAAGCAGAGTGGAACAAGCATCATTCTTTGGTTATGCAATTGGAACAGCTTCCGGTATAGCTTCGAATTCGCGTATTGCAATGTATAAAGCTCTATGGGAAGGCGGAGTGCAATCGTCTGATGTAATAGCTGCAATTGACGCTGGAATATCAGACGGTGTTGATGTTCTTTCAATATCATTCGGTCTGAATGAAATACCTTTGTATGAAGATCCTGTTGCAATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTTGTTTCCACTTCAGCTGGAAATAATGGACCAGACATTACAACATTACACAATGGAACACCTTGGGTTATAACTGTGGCTGCTGGTACTACAGATAGAGATTTTCATGGGACTCTTACACTTGGAAATGGTAAGAAAATCACAGGATCGTCTCGTTATATAGGAACATTCTCTACGGATAATGTTCCTATTGTTTTCATGGGTTTGTGTGACAATGTTACGGAATTGGAAATATTGAAGAGAAAGTTTGTGGTGTGTGAAGACAAGAATGGAACTAGTATTGCTGATCAAGTCAATAATTTGGATGCAGCAAACGTTTTTGGAGCTGTTTTGATTTCGAATGTCTCGGACACATACTATTCACGGAATAGTTTTGCTACCATCATTGTTGATCCAATAAATGGTGAAATTGTCAAAGCTTACATCAAGAGGTATTACAATTCTACTTCATCGGCAAGCATGTCTTTCATGAAAACAGGTTTTGATGTTAAACCAGCACCTACTGTTGATTCTTATAGTTCAAGAGGCCCATCATTTAGTTGTCCATTTGTGTTGAAACCTGACATTACTGCGCCCGGTACTTCGATCTTAGCAGCATGGCCTACAAATGTTCCTGTGTTGCAATTGAATGCTCATAAATTTTTCAGTAAATTCAATATAGAAAGTGGAACATCTATGGCATGTCCTCATGTTGCAGGCGTAGCAGCGCTTATAAAAGGTGCACACCATGACTGGAGTCCTGCGGCTATTCGTTCGGCCATAATGACAACATCAGACATATTTGATAATACTAACGAACAAATCAAAGAAATTGATACAGGTTACATAGCAACACCTTTTGCATTAGGAGCTGGTCATATTAATCCTAATAGAGCACTTGATCCTGGTCTTGTTTATGATGTTGGTGTAAAAGATTATGTTAATCTTCTTTGTGCACTTGATTACTCACAACAAAACATCACTACCATTACAAGATCTTCTTCCAATGATTGCTCTAAACCTTCATTGGATCTCAACTACCCTTCTTTTATTGCTTTCTTCGATGGAGGAAATTCTTCTTCAAGTACAGTACAAGAATTTCACAGAATAGTGACCAATGTTGGTGAGGGACAAACAACTTATGTTGCTAACATTACTCCAATTGAAGGGTTCCATGTCAGTGTTATTCCAAACAAATTGGTGTTCAAAGAGAAGAATGAGAAGTTAAGTTACAAGTTGAGGATTGAAGTTTCAAATATGACAAAATATGTGAATATTGGATCTCTAACTTGGATGGATGTAAAGCATGTTGTTAGGAGTCCAATTGTGGTCACCACTATCTATGTAATGTAA	2277	0.3781	MAPHISQCTLFSYISLFHFIFITLAQSDNYIIHMNLSAMPKAFSSHHTWYLSTLSSALENSQLATTDNHNSPISSKLIYTYTHAMNGFSANLSPKEYESLKNSLGYISSIPDLPLKLDTTHSPQFLGLNPNKGAWHDSNFGQDVIIGLVDTGVWPESESFKDNGITNIPSKWKGQCENSIHFNSSLCNQKLIGAKFFNKGILAKYPNITLGLNSTRDTTGHGTHTSSTAAGSRVEQASFFGYAIGTASGIASNSRIAMYKALWEGGVQSSDVIAAIDAGISDGVDVLSISFGLNEIPLYEDPVAIATFAAMEKGVFVSTSAGNNGPDITTLHNGTPWVITVAAGTTDRDFHGTLTLGNGKKITGSSRYIGTFSTDNVPIVFMGLCDNVTELEILKRKFVVCEDKNGTSIADQVNNLDAANVFGAVLISNVSDTYYSRNSFATIIVDPINGEIVKAYIKRYYNSTSSASMSFMKTGFDVKPAPTVDSYSSRGPSFSCPFVLKPDITAPGTSILAAWPTNVPVLQLNAHKFFSKFNIESGTSMACPHVAGVAALIKGAHHDWSPAAIRSAIMTTSDIFDNTNEQIKEIDTGYIATPFALGAGHINPNRALDPGLVYDVGVKDYVNLLCALDYSQQNITTITRSSSNDCSKPSLDLNYPSFIAFFDGGNSSSSTVQEFHRIVTNVGEGQTTYVANITPIEGFHVSVIPNKLVFKEKNEKLSYKLRIEVSNMTKYVNIGSLTWMDVKHVVRSPIVVTTIYVM*	759

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g1523	758	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	19	755	IPR045051	-
	Tpr5g1523	758	PANTHER	PUTATIVE-RELATED	19	755	-	-
	Tpr5g1523	758	Pfam	Peptidase inhibitor I9	30	117	IPR010259	-
	Tpr5g1523	758	Pfam	Fibronectin type-III domain	652	752	IPR041469	-
	Tpr5g1523	758	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	118	IPR037045	-
	Tpr5g1523	758	Gene3D	Peptidase S8/S53 domain	143	621	IPR036852	GO:0004252\|GO:0006508
	Tpr5g1523	758	PRINTS	Subtilisin serine protease family (S8) signature	141	160	IPR015500	-
	Tpr5g1523	758	PRINTS	Subtilisin serine protease family (S8) signature	217	230	IPR015500	-
	Tpr5g1523	758	PRINTS	Subtilisin serine protease family (S8) signature	537	553	IPR015500	-
	Tpr5g1523	758	Gene3D	-	347	476	-	-
	Tpr5g1523	758	CDD	Peptidases_S8_3	115	574	IPR034197	-
	Tpr5g1523	758	ProSitePatterns	Serine proteases, subtilase family, serine active site.	538	548	IPR023828	-
	Tpr5g1523	758	SUPERFAMILY	Subtilisin-like	117	612	IPR036852	GO:0004252\|GO:0006508
	Tpr5g1523	758	ProSiteProfiles	Serine proteases, subtilase domain profile.	114	608	-	-
	Tpr5g1523	758	Pfam	Subtilase family	141	579	IPR000209	GO:0006508\|GO:0008236
	Tpr5g1523	758	Gene3D	-	625	756	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g1523	Tpr-Chr5	29019169	29021884	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g1523	19	741	Subtilisin-like Serine Gene Family	AT5G67090	45.430	0.0	596

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g1523	-		-	gmx:100786751	1019.99