LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g1522	ATGACTTCCCATATTTCTCAATCCATGTTGTTCTACTATATTGCAATATTCCTCCACTTCATTTTCATCACTTCATTTCCTTCACTAGCTCAATCTGATAACTATATCATACACATGAACATATCAGCCATGCCTAAAGCATTCTCAACTCATCACACATGGTATCAATCAACTCTTTCCTCTGCATTAGAGAAACCTCAACTTGCAACATCCGATAATCTCAACTCTCCAATTTCATCTAAGTTAATTTACACCTACACGCATGCCATGAATGGTTTCAGTGCTAATTTGTCACCAAAAGAACATGAATCTCTCAAAAACTCCCCTGGTTACATTTCTTCCATACCTGATTTACACTTGAAGCTTGACACAACACACTCACCTCAATTCCTTGGCCTCAATCCAAACGTAGGAGCTTGGCATGATTCGAATTTTGGTAAAGATGTGATTGTTGGTTTGATTGACACAGGTGTTTGGCCAGAAAGTGAAAGCTTCAAAGATAATGGAATTGCTATCATTCCTTCAAAATGGAAAGGAAAATGTGAAAATAGCATTCATTTCAATTCATCACTTTGCAACAAAAAATTAATTGGTGCTAAATTCTTCAACAAAGGAATATTAGCAAAACATCCAAACATCACCTTAGGATTAAACTCCACACGCGACACAGAAGGTCATGGGACTCACACTTCATCAACAGCAGCCGGAAGTAGAGTTGATGAAGCTTCATTCTTTGGTTATGCAGCTGGAAAAGCTTCAGGTATAGCTTCGAATTCACGTGTATCAATGTATAAAGCTATATGGGAAGGTGGATTGCTATCGTCTGATGTAATAGCTGCAATTGACGCTGCAATATCAGATGGTGTTGATGTTCTTTCATTATCATTTGGTCTTGATGAAGTACCTTTGTATGAAGATCCTGTTGCTATAGCCACATTTGCAGCTATGGAAAAAGGTGTTTTTGTTACCACTTCAGCTGGAAATGAAGGGCCAAAACTCAAAACATTACACAATGGAACACCTTGGGTTATAACTGTGGCTGCTGGTACTATGGACAGAACTTTCCATGGGACTCTTACACTAGGAAATGGTAACAAAATCACAGGATTGTCTCTCTACGTAGGAACATTCCCTACACATAATATTCCTATTGTTTTCATGGGTTTATGTGACAATGTTAAAGAATTGAAAAAAGCGAAGAAAAAGATTGTGGTGTGTGAAGAAAAGAATGGAACTAACATTTATGATCAAGTCTATTATTTGGATGTTGCAAAAGTTTTTGGTGCTGTTTTGATTTCAAATGTCTCCAGTACATACTATTCACAAAATAGTTTTGCAACCATCATTGTTGATCCAATGTTTGGGGAAATTATCAAAGCTTACATCAAGAGTTATTACAATTCTAAGCATGCTACTTCAGTTGCAAACATGTCTTTCATGGAAACTGGTTTTGGTGTTAAACCAGCACCTAGAGTTAGTTCTTATAGTTCAAGAGGCCCATCATATAGTTGTCCATTTGTGTTGAAACCTGATATTACTGCACCTGGTACTTCGATCTTAGCTGCATGGCCTACAAATGTTCCTGTGTTGGAATTGAAGTCTCAAACGTTTTTCAGCAAGTTTAATATTATAAGTGGAACATCTATGGCGTGCCCTCATGTTGCAGGTGTAGCGGCGCTTATAAAAGGTGCACACCGTGATTGGAGCCCTGCGGCTATTCGGTCGGCAATAATGACAACATCAGACATATTTGATAATACTAACGAACAAATCAAAGACATTGGAACAGGTGACAAAGCAACACCTTTTGCATTAGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTAAAATACTCTCAAAGAAACATCACTACCATTACAAGATCTTCTTCCAATAATGATTGCTCTAAACCTTCATTGGATCTCAACTACCCTTCTTTTATTGCTTTTTTCAATGGTGGAAATTCTTCTTCAAGTACAGTACAAGAATTTTACAGAACAGTGACCAATGTTGGTGAGGGACAATCAATTTATGTTGCTAGCATTACTCCAATCAAAGGGTTCCATGTCAGTGTCATCCCAAACAAATTGATGTTCAATGAGAAGAATGAGAAGCTAAGCTACAAGTTGAGGATTGAAGTTGAAAGTATGACAAAATTAAAGAAAGTGGCGTTTGGATATCTAATTTGGATGGATATGAATCATGTTGTTAGGAGTCCAATTGTGGTCACCACTCTCAAATAA	2304	0.3741	MTSHISQSMLFYYIAIFLHFIFITSFPSLAQSDNYIIHMNISAMPKAFSTHHTWYQSTLSSALEKPQLATSDNLNSPISSKLIYTYTHAMNGFSANLSPKEHESLKNSPGYISSIPDLHLKLDTTHSPQFLGLNPNVGAWHDSNFGKDVIVGLIDTGVWPESESFKDNGIAIIPSKWKGKCENSIHFNSSLCNKKLIGAKFFNKGILAKHPNITLGLNSTRDTEGHGTHTSSTAAGSRVDEASFFGYAAGKASGIASNSRVSMYKAIWEGGLLSSDVIAAIDAAISDGVDVLSLSFGLDEVPLYEDPVAIATFAAMEKGVFVTTSAGNEGPKLKTLHNGTPWVITVAAGTMDRTFHGTLTLGNGNKITGLSLYVGTFPTHNIPIVFMGLCDNVKELKKAKKKIVVCEEKNGTNIYDQVYYLDVAKVFGAVLISNVSSTYYSQNSFATIIVDPMFGEIIKAYIKSYYNSKHATSVANMSFMETGFGVKPAPRVSSYSSRGPSYSCPFVLKPDITAPGTSILAAWPTNVPVLELKSQTFFSKFNIISGTSMACPHVAGVAALIKGAHRDWSPAAIRSAIMTTSDIFDNTNEQIKDIGTGDKATPFALGAGHVNPNRALDPGLVYDVGVQDYVNLLCALKYSQRNITTITRSSSNNDCSKPSLDLNYPSFIAFFNGGNSSSSTVQEFYRTVTNVGEGQSIYVASITPIKGFHVSVIPNKLMFNEKNEKLSYKLRIEVESMTKLKKVAFGYLIWMDMNHVVRSPIVVTTLK*	768

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g1522	767	Pfam	Fibronectin type-III domain	661	763	IPR041469	-
	Tpr5g1522	767	PRINTS	Subtilisin serine protease family (S8) signature	146	165	IPR015500	-
	Tpr5g1522	767	PRINTS	Subtilisin serine protease family (S8) signature	222	235	IPR015500	-
	Tpr5g1522	767	PRINTS	Subtilisin serine protease family (S8) signature	545	561	IPR015500	-
	Tpr5g1522	767	Pfam	Peptidase inhibitor I9	35	122	IPR010259	-
	Tpr5g1522	767	Gene3D	-	633	766	-	-
	Tpr5g1522	767	CDD	Peptidases_S8_3	120	582	IPR034197	-
	Tpr5g1522	767	Gene3D	-	352	485	-	-
	Tpr5g1522	767	ProSiteProfiles	Serine proteases, subtilase domain profile.	127	616	-	-
	Tpr5g1522	767	SUPERFAMILY	Subtilisin-like	122	620	IPR036852	GO:0004252\|GO:0006508
	Tpr5g1522	767	ProSitePatterns	Serine proteases, subtilase family, serine active site.	546	556	IPR023828	-
	Tpr5g1522	767	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	23	765	IPR045051	-
	Tpr5g1522	767	PANTHER	PUTATIVE-RELATED	23	765	-	-
	Tpr5g1522	767	Pfam	Subtilase family	146	608	IPR000209	GO:0006508\|GO:0008236
	Tpr5g1522	767	Gene3D	Peptidase S8/S53 domain	148	629	IPR036852	GO:0004252\|GO:0006508
	Tpr5g1522	767	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	25	123	IPR037045	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g1522	Tpr-Chr5	29002915	29005545	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g1522	9	766	Subtilisin-like Serine Gene Family	AT5G67090	45.058	0.0	619

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g1522	-		-	gmx:100783026	1021.54