Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr5g1521 | ATGGCTTCCAATATTCGTCTATCTTTGTGGTTCTCTTATATTGCAAGTCTTCACTTAAGTTTTACTTTGGCTCGCTCTGATAATTATATCATTCATATGGATTTATCAGTTATGCCAAAAGTATTCTCAAATCAACATAGTTGGTATGAATCCACTCTTTCTCAAGTTACTCCTACCAACAATATTCTCAAGTCTACCTCTTCTAAAATTATTTATACATACAACAATGTTATGAATGGTTTCAGCGCGAATCTATCACCAGAAGAGCATGAAGCTCTCAAAACCTCCCCCGGTTACATCTCTTCAATACCTGATTTACCGCTGAAGCTAGACACAACACATTCACCTCAATTTCTTGGCCTTAATCCCGACAAAGGAGCATGGAAAACTTCAAAGTTTGGTCAAGATATAATCGTTGGTGTGGTTGACACCGGTGTTTGGCCAGAAAGTGAAAGTTTCAAAGATCATGGAATGACTAAAGTTCCTTCTAAATGGAAAGGTCAATTATGTCAATTTGAAAATACAAACAATTCATCTTTTTGCAACAAGAAACTCATTGGAGCTAGATTCTTCAACAGAGGGTTCTTGGCAAAATTTTCTAACATAAGTGCAACGATTGTGAACACCACACGTGATGAAGATGGTCATGGGACCCACACTTCGACAACAGCAGCCGGAAGTAGAGTAGATGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCTAGTGGAATAGCTTCATTATCTAGAGTCGCCATCTACAAGACTGTGTGGGGACCAAAAGGAGATGCAGTATCATCTGATGTAATAGCTGCAATTGATGCTGCAATAGCCGACGGTGTTGATGTTCTTTCATTATCACTAGGCTATAGCAATGTGTCTTTGTATGAAGATGGTGTTGCTATAGCAACATTTGCAGCTATGGAGAAAGGTGTTTTTGTTTCTACTTCAGCTGGAAATGATGGTCCTTCCTATAAAACTCTTCACAATGGAACACCATGGGTGACAACTGTTGCTGCTGGCACTCTGGATCGCGAATTTCGGGGGAGTCTTTCACTTGGTAATGGAGTCTCAGTCACTGGTTTTGCTTCTTATCTGGGAATCTTCTCTAATAGTAATATTCCAATTGTTTTCATGGGTATGTGTGATAATATTACTGAACTTATCAAAGTGAAGAGCAAGATTGTGGTTTGTGAAAACAATAATGGAACTCTTTCTAGCCAATTTTATAATGTGGCTGAAGCAAGAGTTGTTGGAGGTGTTTTCATATCAAACATATCTGAAATTGAAATGTCACAACTCTTATGGCAGCCGCTTCCATTGATCATTATTAACCAGAAATATGGAGAAATTGTCAAAGATTACATACAGAGTAACTCTAACTCTAGTTCAGTAGCAAAAATGTCTTTCAAGATAACATCTTTTGGTGTTAAACCAACACCTAGTCTGGATTATTATAGTTCAAGAGGGCCTTCAAATAGTTGTCCATATGTTTTGAAACCTGACATTACAGGTCCTGGTACATCAATCTTAGCTGCATGGCCTACAAATATTCCTGTGTTGAGTTTTGGGTCTTATAAAATCTTCAACAAGTTCAATTTTCTAACTGGAACATCTATGTCATGTCCTCATGTTGCTGGTGTAGGAGCACTTTTGAAAGGAGCGCATGGCGATTGGAGCCCTGCAGCTATTAGATCGGCAATGATGACAACATCAGACATACTTGATAATACTAAAAAACACATCAAAGATCTTGCAACAGATAAAGAAGCAACCCCTCTTGCACTGGGAGCTGGTCACATCAACCCCAATAGAGCACTTGACCCTGGTCTTGTTTATGATGTTGGCGTACAAGATTATGTTAATCTTCTTTGTGGACTTAACTTTACACAGAAAAACATCTCCGCCATTACACGATCCTCTTTCAGTGATTGCTCTAAACCGTCATTGGATCTCAATTACCCTTCTTTTATTGCTTTCTTCAATGCTAGAAATTCTTCTTCAAAAACCACACAACATTTTCACAGAACAGTTACCAATGTTGGTGAAGGTCGAACGACTTATGTTGCTAGCATTACTCCAATTAAAGGGTTCCGTCTCAGCGTTATCCCAAATAAATTGGTGTTCAAGAAAAAGAACCAGAAGATAAGTTATAGGTTGAGCATTGAAGGTCCAACAATGAGACAAAATAATATAGAATCTTTTGGATATCTCACTTGGAAGGATGGGAAGCATGTAGTTAGGAGCCCTATTGTTGTAACCAATATGTAA | 2271 | 0.3835 | MASNIRLSLWFSYIASLHLSFTLARSDNYIIHMDLSVMPKVFSNQHSWYESTLSQVTPTNNILKSTSSKIIYTYNNVMNGFSANLSPEEHEALKTSPGYISSIPDLPLKLDTTHSPQFLGLNPDKGAWKTSKFGQDIIVGVVDTGVWPESESFKDHGMTKVPSKWKGQLCQFENTNNSSFCNKKLIGARFFNRGFLAKFSNISATIVNTTRDEDGHGTHTSTTAAGSRVDGASFFGYANGTASGIASLSRVAIYKTVWGPKGDAVSSDVIAAIDAAIADGVDVLSLSLGYSNVSLYEDGVAIATFAAMEKGVFVSTSAGNDGPSYKTLHNGTPWVTTVAAGTLDREFRGSLSLGNGVSVTGFASYLGIFSNSNIPIVFMGMCDNITELIKVKSKIVVCENNNGTLSSQFYNVAEARVVGGVFISNISEIEMSQLLWQPLPLIIINQKYGEIVKDYIQSNSNSSSVAKMSFKITSFGVKPTPSLDYYSSRGPSNSCPYVLKPDITGPGTSILAAWPTNIPVLSFGSYKIFNKFNFLTGTSMSCPHVAGVGALLKGAHGDWSPAAIRSAMMTTSDILDNTKKHIKDLATDKEATPLALGAGHINPNRALDPGLVYDVGVQDYVNLLCGLNFTQKNISAITRSSFSDCSKPSLDLNYPSFIAFFNARNSSSKTTQHFHRTVTNVGEGRTTYVASITPIKGFRLSVIPNKLVFKKKNQKISYRLSIEGPTMRQNNIESFGYLTWKDGKHVVRSPIVVTNM* | 757 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr5g1521 | 756 | Gene3D | - | 624 | 756 | - | - | |
| Tpr5g1521 | 756 | Pfam | Peptidase inhibitor I9 | 29 | 110 | IPR010259 | - | |
| Tpr5g1521 | 756 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 537 | 547 | IPR023828 | - | |
| Tpr5g1521 | 756 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 16 | 111 | IPR037045 | - | |
| Tpr5g1521 | 756 | PANTHER | PUTATIVE-RELATED | 18 | 755 | - | - | |
| Tpr5g1521 | 756 | CDD | PA_subtilisin_like | 350 | 467 | - | - | |
| Tpr5g1521 | 756 | Pfam | Subtilase family | 134 | 578 | IPR000209 | GO:0006508|GO:0008236 | |
| Tpr5g1521 | 756 | Gene3D | Peptidase S8/S53 domain | 136 | 620 | IPR036852 | GO:0004252|GO:0006508 | |
| Tpr5g1521 | 756 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 18 | 755 | IPR045051 | - | |
| Tpr5g1521 | 756 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 107 | 607 | - | - | |
| Tpr5g1521 | 756 | SUPERFAMILY | Subtilisin-like | 110 | 611 | IPR036852 | GO:0004252|GO:0006508 | |
| Tpr5g1521 | 756 | CDD | Peptidases_S8_3 | 108 | 573 | IPR034197 | - | |
| Tpr5g1521 | 756 | Pfam | Fibronectin type-III domain | 651 | 753 | IPR041469 | - | |
| Tpr5g1521 | 756 | PRINTS | Subtilisin serine protease family (S8) signature | 134 | 153 | IPR015500 | - | |
| Tpr5g1521 | 756 | PRINTS | Subtilisin serine protease family (S8) signature | 212 | 225 | IPR015500 | - | |
| Tpr5g1521 | 756 | PRINTS | Subtilisin serine protease family (S8) signature | 536 | 552 | IPR015500 | - | |
| Tpr5g1521 | 756 | Gene3D | - | 344 | 476 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr5g1521 | Tpr-Chr5 | 28982374 | 28984644 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr5g1521 | 1 | 742 | Subtilisin-like Serine Gene Family | AT5G67090 | 44.122 | 0.0 | 598 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr5g1521 | - | - | gmx:100786751 | 929.858 |