Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1513 ATGATGATGAACAATAAGGTTTCACGGAGGCAACGTACTAGAGTAGGAAAATATGAAATGGGAAAAACAATTGGTGAAGGAAGTTTTGCAAAGGTGAAGTTGGCAAAAAATGTTGAAAATGGAAATTTTGTTGCCATTAAAATTCTTGATCGTAATCATGTTCTTCGCCACCATATGAAGGAACAGCTGAGTAGAGAAATTTCAACTATGAAGATTATTAATCATCCAAACGTTGTCAAAATATACGAGGTAATGGCAAGCAAAACAAAGATTTACATTGTCTTGGAGTTAGTTAAAGGAGGAGAACTATTTGATAAAATTGCTAAGAATGGGAAACTTAAAGAGGATGAAGCAAGAAGTTATTTCCATCAACTAATCAATGCAGTTGATTATTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCAGAGAATCTTCTTTTGGACAATAATGGTGTTCTTAAAATTACAGATTTTGGATTAAGTACATACTCACAGCAGGAGGATGAACTTCTCCGCACGGCATGCGGAACACCGAATTACGTTGCTCCTGAGGTGATTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGCTACTTGCCGTTCGATGAGCCGAATCAAATGACACTTTTTCAGAAAATTAGTAGGGCTGAGTTCACATTTCCGCCTTGGTTTTCCGCGGAGGGAAAGAAACTGCTCAAGGCTATACTTAACCCGGACCCTCTAACGAGGATAAAAATTTCGGAAATCTTGGAAGATGAATGGTTCAAAAAAGGATACAAGCCGGCTACTTTTACGGAGGAAGATGATGTCAACGTAGATGATGTCGCTGCTGCCTTCAATGATTCTAAGGAAAATCTCGTGAGTGAGACTAAAGAGAAACCCGTATCAATGAATGCTTTTGAGCTTATTTCTAGATCTCAAAGCTTCAATCTTGACAATATGTTTGAGATGGAGCAAAAGGGTGTTGTAAAGCGCGAAACACATTTCGCTTCACAGCGCCCTGCAAATGAAATTATGTCTAAAATTGAGGAGACTGCCAAACCTCTAGGATTTAACGTTCATAAGCGAGATTACAAGATGAAGCTGCAAGGTGATAAAAGTGGAAGGAAGGGTCACCTTTCAGTAGCTACTGAGGTTTTTGAAGTGGCTCCGTCGTTGCATATGGTCGAGCTACGAAAGACGGGCGGCGACACACTAGAGTTTCACAAGTTCTACAAAACATTTTCATCAGGGTTGCAAGACATAGTGTGGCACACTGACAGTGTCAAATAA 1320 0.397 MMMNNKVSRRQRTRVGKYEMGKTIGEGSFAKVKLAKNVENGNFVAIKILDRNHVLRHHMKEQLSREISTMKIINHPNVVKIYEVMASKTKIYIVLELVKGGELFDKIAKNGKLKEDEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDNNGVLKITDFGLSTYSQQEDELLRTACGTPNYVAPEVINDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPNQMTLFQKISRAEFTFPPWFSAEGKKLLKAILNPDPLTRIKISEILEDEWFKKGYKPATFTEEDDVNVDDVAAAFNDSKENLVSETKEKPVSMNAFELISRSQSFNLDNMFEMEQKGVVKRETHFASQRPANEIMSKIEETAKPLGFNVHKRDYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKTFSSGLQDIVWHTDSVK* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1513 439 ProSiteProfiles Protein kinase domain profile. 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1513 439 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Tpr5g1513 439 PANTHER - 9 435 - -
Tpr5g1513 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Tpr5g1513 439 CDD CIPK_C 314 428 - -
Tpr5g1513 439 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 9 435 - -
Tpr5g1513 439 Gene3D Kinase associated domain 1, KA1 307 434 - -
Tpr5g1513 439 Pfam Protein kinase domain 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1513 439 Gene3D Transferase(Phosphotransferase) domain 1 98 299 - -
Tpr5g1513 439 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Tpr5g1513 439 SUPERFAMILY Protein kinase-like (PK-like) 15 304 IPR011009 -
Tpr5g1513 439 Gene3D Phosphorylase Kinase; domain 1 7 97 - -
Tpr5g1513 439 Pfam NAF domain 310 371 IPR004041 GO:0007165
Tpr5g1513 439 SMART serkin_6 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1513 Tpr-Chr5 28831424 28836368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1513 6 438 CBL-interacting serine-threonine protein kinases AT1G01140 72.500 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr5g1513 Pkinase 8.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1513 - - gmx:100794136 756.903