Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1512 ATGATGAACAATAATAAAGTACCACCGAGACCTCGTACTAGAGTTGGAAAGTACGAGATGGGAAAAACAATTGGTGAAGGAAGTTTTGCGAAAGTTAAGTTAGCAAAGAATGTTGAAAATGGTGATTATGTTGCTATTAAAATTCTTGATCGTAATCATGTGCTTCGTCATAATATGATGGATCAGCTGAAGAGAGAAATTTCAGCTATGAAGATAATTAATCATCCAAATGTTGTTAAAATATTTGAGGTAATGGCAAGCAAAACAAAAATTTACATTGTCTTGGAGTTAGTTAGTGGAGGAGAATTATTTGACAAAATTGCTAAAAATGGGAGACTTAGAGAGGATGAAGCAAGAAGTTATTTCCAACAACTAATCAATGCAGTTGATTACTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCAGAGAATCTTCTTTTGGACTCAAATGGTGTTCTTAAAGTTTCGGATTTTGGATTAAGTACATACTCACAGCAGGAGGATGAACTTCTCCGTACGGCATGCGGAACACCGAATTACGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCTTGTGGAGTCATTTTATTTGTACTTATGGCTGGCTACTTGCCGTTCGACGAGCCGACTACAATTGCACTTTATAGAAAAATTGGTAGGGCTGAGTTCACATGTCCGCCTTGGTTTTCGCCTGAGGCAAAGAAACTGCTCAAGTCTATACTTAATCCGAACCCTCTAACGAGGATAAAAATTCCGGAACTCTTGGAAGATGAATGGTTCAAAAAAGGATATAAGCCGGCATCTTTTACCGAGGAAGATGATATCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAATCTCGTGACAGAGACCAAAGAGAAACCTGTGTCGATGAATGCTTTTGAGCTTATTTCTAGATCACAAAGCTTCAATCTTGACAATTTGTTTGAGAGGCAAAAGGGGGTTGTAAAGCGCGAAACACATTTCACTTCACAGTGCCCTGCAAATGAAATTATGTCTAAGATTGAGGAGGCTGCCAAACCTCTCGGATTTAATGTTCACAAGCGAAATTACAAGATGAAGCTGCAAGGTGATAAAAGCGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTTGAAGTGGCTCCGTCGTTGCATATGGTCGAGCTACGAAAGACGGGCGGCGACACACTAGAGTTTCACAAGTTCTACAAAACATTTTCATCAGGTTTGCAAGACATAGTGTGGCATTCAGACAAAAAGTAA 1314 0.3957 MMNNNKVPPRPRTRVGKYEMGKTIGEGSFAKVKLAKNVENGDYVAIKILDRNHVLRHNMMDQLKREISAMKIINHPNVVKIFEVMASKTKIYIVLELVSGGELFDKIAKNGRLREDEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNGVLKVSDFGLSTYSQQEDELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPTTIALYRKIGRAEFTCPPWFSPEAKKLLKSILNPNPLTRIKIPELLEDEWFKKGYKPASFTEEDDINVDDVAAAFNDSKENLVTETKEKPVSMNAFELISRSQSFNLDNLFERQKGVVKRETHFTSQCPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKTFSSGLQDIVWHSDKK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1512 437 CDD CIPK_C 314 427 - -
Tpr5g1512 437 Pfam Protein kinase domain 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1512 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Tpr5g1512 437 Gene3D Transferase(Phosphotransferase) domain 1 98 298 - -
Tpr5g1512 437 Coils Coil 434 437 - -
Tpr5g1512 437 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Tpr5g1512 437 Gene3D Phosphorylase Kinase; domain 1 9 97 - -
Tpr5g1512 437 ProSiteProfiles Protein kinase domain profile. 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1512 437 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Tpr5g1512 437 PANTHER - 12 435 - -
Tpr5g1512 437 Pfam NAF domain 310 370 IPR004041 GO:0007165
Tpr5g1512 437 SUPERFAMILY Protein kinase-like (PK-like) 15 299 IPR011009 -
Tpr5g1512 437 Gene3D Kinase associated domain 1, KA1 307 433 - -
Tpr5g1512 437 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 12 435 - -
Tpr5g1512 437 SMART serkin_6 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1512 Tpr-Chr5 28823828 28828526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1512 6 435 CBL-interacting serine-threonine protein kinases AT1G01140 75.286 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr5g1512 Pkinase 8.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1512 - - gmx:100794136 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1512 5 28823828 28828526 Tpr5g1512 5 28823828 28828526 ECH
Tpr5g2802 5 50797222 50803688 Tpr5g1512 5 28823828 28828526 PCT