LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g1511	ATGGATTCAAGAATTTGTATCTGTTTTTTGTTATGTATAAGCCTTCAATTTATTTACACATTGGCTGACTCTGATAATTATATCATTCATATGGATTTATCAGTTATGCCAAAAGCATTCTCAAACCAACATAGTTGGTATGAATCTACTCTTTCTCAAGTTACTACTACCAACAATAATCTCAAGTCTACCTCTTCTAAAATCATTTATACATACAATAATGTTATGAATGGTTTTAGCGCAAATCTATCACCTGAAGAGCATGAAGCTCTCAAAACCTCCGCCGGTTACATTTCTTCAATACCTGATTTACCCTTGAAACTTGACACAACACACTCGCCTCAATTCCTTGGCCTTAATCCCTACAAAGGGGCCTGGCCAGCTTCTGATTTTGGCAAAGATATCATTATTGGTGTAATAGACACCGGTGTTTGGCCAGAAAGTGAAAGTTTCAACGATCATGGAATGACTAAAATACCCACAAAATGGAAAGGTCAATTATGTCAATTTGAAAATACCAAAAATTCATCTTTTTGCAACAAGAAACTTATTGGAGCTAGATTCTTCAACAAAGGGTTCTTGGCGAAATATCGAAATATTAGTGAAACAATTGTGAACTCCACACGTGACACAGAAGGTCATGGGACCCACACTTCAGCAACAGCGGCCGGAAGCAGAGTCGACAGTGCATCTTTCTTCGGTTATGCAAATGGAACAGCATCGGGAATAGCTTCGTTGTCTAGAGTAGCCATATACAAGCCTGTGTGGGGACCAGATGCAGATGCAGTATCATCTGATGTAATAGCTGCAATTGATGCTGCAATATCAGACGGTGTTGATGTTCTTTCAATGTCATTAGGCTATAGCAATATTCCATTGTATGAAGATGCTTTTGCTATAGCAACATTTGCAGCTATGGAAAAAGGTATTTTTGTGTCTACTTCAGCAGGTAATAGCGGACCTTCATTTAAAACCTTACACAATGGAACGCCATGGGTGATTACTGTTGCGGCTGGTACTTTGGATCGTGAATCTCATGGGAATCTTACACTTGGAAATGGAGTCTCACTCACTGGCTTCGCTACTTATCTAGGAAACTTCTCTGCTAGCAATCTTCCAATTGTTTTTATGGGTACGTGCGATAATTATACTGAACTAATCAAAGTGAAAAGCAAAATTGTGGTTTGTGAAGACAAGGATGGAACTCTTTCCAGTCATGTTTTTAATGTGGTTGAAGCAGAAGTTGTTGGAGCTGTTTTCATATCAAACGCGTCAGATTTCCTACAGTACTCGTTTCCATCGATCACTATTAATAAGAAAAATGGTGAAATTGTCAAAGATTACATACAGAGTTCCTCTAACTCTAGTTCAATAGCAAAAATGTCTTTTAAGATAACATCTTTTGATGCTAAACCAACACCTAGTGTTGATTTTTATAGTTCAAGAGGGCCTGCAAAGAGTTGTCCATATGTTTTGAAACCTGACATTACAGGTCCTGGTACATCGATCTTAGCTGCATGGCCCGCAAACATTCCCGTCTTGGATTTTGGGGATCATAAACTCTTCAGCAAGTTCAAATTTTTATCTGGAACATCGATGTCATGTCCTCATGTTGCTGGTGTAGGAGCACTTTTGAAAGGAGCACATCCTGATTGGAGTCCTGCAGCTATTAGATCAGCAATGATGACAACATCAGACATACTTGATAATACTAAGAAACCCATCAAAGACATTGGAAAAGGTAACAAAGTTGCAACTCCTCTTGCATTGGGAGCTGGTCATATCAACCCTAATAGAGCACTTGACCCCGGTCTTGTTTACGATGTTGTTGTACAAGATTATGTTAACCTTCTTTGTGCACTTAACTTCACACAAGAAAACATCACTTCCATTACAAGATCCTCTACCAATGATTGTTCTAAACCTTCCTTGGATCTTAACTACCCTTCTTTTATCGCTTTCTTTAATGCGGAAAACTCCTCGTCAAGAACATCCCAAGAATTTAGCAGAACAGTGACCAATGTTGGCGAGGAAAAAACAACTTATGTTGCTAGCATTACACCAATTGAAGGGTTCAATGTCACTGTTATCCCTGATAAATTGGTGTTCAGTAAGAAGAATGAGAAGTTAAGCTACAAGTTGAGGATTGAAGGCCCAAGAATGACACAAGAGGATGAAGTAGCTTTTGGCTACCTCACTTGGCAGAATGAGAAGCATGTGGTGAGGAGCCCTATTGTAGTAACCAATATCCAGTAA	2256	0.3892	MDSRICICFLLCISLQFIYTLADSDNYIIHMDLSVMPKAFSNQHSWYESTLSQVTTTNNNLKSTSSKIIYTYNNVMNGFSANLSPEEHEALKTSAGYISSIPDLPLKLDTTHSPQFLGLNPYKGAWPASDFGKDIIIGVIDTGVWPESESFNDHGMTKIPTKWKGQLCQFENTKNSSFCNKKLIGARFFNKGFLAKYRNISETIVNSTRDTEGHGTHTSATAAGSRVDSASFFGYANGTASGIASLSRVAIYKPVWGPDADAVSSDVIAAIDAAISDGVDVLSMSLGYSNIPLYEDAFAIATFAAMEKGIFVSTSAGNSGPSFKTLHNGTPWVITVAAGTLDRESHGNLTLGNGVSLTGFATYLGNFSASNLPIVFMGTCDNYTELIKVKSKIVVCEDKDGTLSSHVFNVVEAEVVGAVFISNASDFLQYSFPSITINKKNGEIVKDYIQSSSNSSSIAKMSFKITSFDAKPTPSVDFYSSRGPAKSCPYVLKPDITGPGTSILAAWPANIPVLDFGDHKLFSKFKFLSGTSMSCPHVAGVGALLKGAHPDWSPAAIRSAMMTTSDILDNTKKPIKDIGKGNKVATPLALGAGHINPNRALDPGLVYDVVVQDYVNLLCALNFTQENITSITRSSTNDCSKPSLDLNYPSFIAFFNAENSSSRTSQEFSRTVTNVGEEKTTYVASITPIEGFNVTVIPDKLVFSKKNEKLSYKLRIEGPRMTQEDEVAFGYLTWQNEKHVVRSPIVVTNIQ*	752

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g1511	751	CDD	Peptidases_S8_3	106	566	IPR034197	-
	Tpr5g1511	751	PRINTS	Subtilisin serine protease family (S8) signature	132	151	IPR015500	-
	Tpr5g1511	751	PRINTS	Subtilisin serine protease family (S8) signature	210	223	IPR015500	-
	Tpr5g1511	751	PRINTS	Subtilisin serine protease family (S8) signature	529	545	IPR015500	-
	Tpr5g1511	751	Gene3D	-	342	469	-	-
	Tpr5g1511	751	ProSitePatterns	Serine proteases, subtilase family, serine active site.	530	540	IPR023828	-
	Tpr5g1511	751	Pfam	Fibronectin type-III domain	645	747	IPR041469	-
	Tpr5g1511	751	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	19	109	IPR037045	-
	Tpr5g1511	751	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	17	749	IPR045051	-
	Tpr5g1511	751	Gene3D	Peptidase S8/S53 domain	134	614	IPR036852	GO:0004252\|GO:0006508
	Tpr5g1511	751	Gene3D	-	618	750	-	-
	Tpr5g1511	751	PANTHER	PUTATIVE-RELATED	17	749	-	-
	Tpr5g1511	751	Pfam	Peptidase inhibitor I9	27	108	IPR010259	-
	Tpr5g1511	751	Pfam	Subtilase family	132	571	IPR000209	GO:0006508\|GO:0008236
	Tpr5g1511	751	SUPERFAMILY	Subtilisin-like	108	605	IPR036852	GO:0004252\|GO:0006508
	Tpr5g1511	751	ProSiteProfiles	Serine proteases, subtilase domain profile.	105	601	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g1511	Tpr-Chr5	28821265	28823978	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g1511	5	737	Subtilisin-like Serine Gene Family	AT5G67090	44.681	0.0	612

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g1511	-		-	gmx:100786751	963.37