Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g1499 | ATGTTAGACATAGAAAATATGGAATATGGTCAATATAGTTATTCAACAGAAGCTGGAGAGGAAGAAACTTATACAACTAGTAGCACAAGTTCCATGAGAAAGAAGAAAAACAAGAATCCAAAGAGGTTTAGTGATGAACAAATCAAATCATTGGAAACTATGTTTGAGACTGAATCAAGACTTGAACCTAGAAAGAAGTTGCAATTGGCAAGAGAACTTGGATTGCAACCAAGACAAGTTGCTATTTGGTTTCAAAATAAGAGAGCTAGATGGAAATCAAAGCAACTTGAAAGAGAATACAATAAACTTCAAAGTAGTTACAACAATTTGGCTTCAAAGTTTGAATCAATGAAGAAGGAAAGACAAACATTGCTAATACAGTTGCAGAAGCTGAATGATCTAATACAAAAGCCAATAGAGCAAAGTCAAAGTAGTTCACAAGTTAAAGAAGCAAACAGCATGGAAAGTGAATCAGGAAATGGAGGAACAATCAAATGTGAGGCTGAGGTGAAACCAAGTACTTCAATAGAAAGATCAGAACATGTTCCTGATGTTCTTTCAGATGATGACACAAGCATAAAAGTTGAATACTTTGGAATGGAAAATGAACCAAGCCTAATGAATTTTGCTGAACATGCTGATGGTTCCTTAACATCACCAGAAGATTGGAGTGCTTTTGAATCAAATGATCTATTAGGACAATCAAGTTGTGATTATCAATGGTGGGACTTTTGGTCTTGA | 741 | 0.3482 | MLDIENMEYGQYSYSTEAGEEETYTTSSTSSMRKKKNKNPKRFSDEQIKSLETMFETESRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYNKLQSSYNNLASKFESMKKERQTLLIQLQKLNDLIQKPIEQSQSSSQVKEANSMESESGNGGTIKCEAEVKPSTSIERSEHVPDVLSDDDTSIKVEYFGMENEPSLMNFAEHADGSLTSPEDWSAFESNDLLGQSSCDYQWWDFWS* | 247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g1499 | 246 | MobiDBLite | consensus disorder prediction | 9 | 33 | - | - | |
Tpr5g1499 | 246 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 16 | 246 | IPR045224 | GO:0003700 | |
Tpr5g1499 | 246 | Coils | Coil | 86 | 134 | - | - | |
Tpr5g1499 | 246 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Tpr5g1499 | 246 | Pfam | Homeodomain | 41 | 92 | IPR001356 | GO:0003677 | |
Tpr5g1499 | 246 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7 | 16 | 246 | - | - | |
Tpr5g1499 | 246 | ProSiteProfiles | 'Homeobox' domain profile. | 34 | 94 | IPR001356 | GO:0003677 | |
Tpr5g1499 | 246 | MobiDBLite | consensus disorder prediction | 139 | 160 | - | - | |
Tpr5g1499 | 246 | ProSitePatterns | 'Homeobox' domain signature. | 69 | 92 | IPR017970 | GO:0000981|GO:0006355 | |
Tpr5g1499 | 246 | Gene3D | - | 19 | 100 | - | - | |
Tpr5g1499 | 246 | CDD | homeodomain | 43 | 95 | IPR001356 | GO:0003677 | |
Tpr5g1499 | 246 | SUPERFAMILY | Homeodomain-like | 24 | 96 | IPR009057 | - | |
Tpr5g1499 | 246 | SMART | HOX_1 | 34 | 98 | IPR001356 | GO:0003677 | |
Tpr5g1499 | 246 | MobiDBLite | consensus disorder prediction | 139 | 166 | - | - | |
Tpr5g1499 | 246 | Pfam | Homeobox associated leucine zipper | 94 | 135 | IPR003106 | GO:0006355|GO:0043565 | |
Tpr5g1499 | 246 | PRINTS | Lambda-repressor HTH signature | 65 | 74 | IPR000047 | GO:0003677 | |
Tpr5g1499 | 246 | PRINTS | Lambda-repressor HTH signature | 74 | 90 | IPR000047 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g1499 | Tpr-Chr5 | 28469054 | 28470696 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g1499 | 16 | 246 | Homeobox Transcription Factor Family | AT2G46680 | 49.416 | 1.97e-62 | 194 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Tpr5g1499 | Homeodomain | 2.1e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g1499 | K09338 | - | gmx:100797862 | 342.428 |