Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1487 ATGAAAGTTCCAATGGAGGAAAAGCCATTCCCTGCATGGTCATGGTCTGTTGAGCAGTGTTTGAAAGAGTACAGTGTGAAACTAGACAAGGGTTTGAGCTCTTCTGAGGTTCAGAAGCGGCGCGAGAAGTATGGTTGGAATGAGTTAGCAAAAGAAAAGGGAAAGCCATTATGGAAACTAGTGTTAGAACAATTTGATGACATGTTGGTGAAGATACTTTTGGTTGCCGCCTTTGTATCGTTTCTTTTGGCATACATTGAAGGAAGTGAATCGGGCGAGTCTGGATTTGAAGCTTATGTAGAGCCACTCGTGATCATTTTGATTTTAGTCCTTAACGCAATTGTCGGAGTATGGCAAGAGAATAATGCTGAAAAGGCTCTTGAAGCTCTAAAAGAATTGCAATGTGAATCTATTAAAGTGTTAAGGGATGGATATTTTGTTCCTGACTTGCCTGCGCGAGAGCTTGTTCCCGGCGACATTGTTGAGTTGCGTGTTGGAGATAAAGTCCCTGCTGACATGAGAGTTGCAGCTTTGAAAACCTCAACATTGAGAGCGGAACAAAGCTCGTTAACCGGAGAAGCAATGCCTGTTCTCAAAGGAATAAATCCTATTTTCTTGGACGATTGTGAATTGCAGGCCAAAGAAAATATGGTATTTGCAGGAACAACTGTTGTCAATGGAAGCTGTATTTGCATTGTTATTACCACAGCAATGAACACTGAAATCGGAAAGATACAAAAGCAAATACACGAAGCTTCGTTGGAGGAGAGCGATACTCCGTTGAAGAAGAAATTGGACGAATTTGGTGGAAGGCTTACAACTTCTATCGGAATAGTTTGTCTAGTTGTTTGGATTATAAACTACAAAAATTTCATTTCTTGGGATGTTGTTGATGGATGGCCTTCAAACATTCAATTTTCTTTTCAGAAATGCACTTACTATTTCAAAATTGCCGTTGCTCTTGCTGTTGCTGCAATACCAGAAGGTCTTCCGGCAGTTATCACAACTTGTTTAGCACTTGGCACAAGAAAAATGGCACAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTTGAAACTTTAGGATGTACCACTGTGATTTGTTCAGATAAAACCGGTACACTGACTACGAATCAAATGTCCGCGACTGAGTTTTTTACTTTGGGAGGGAAAACCACTGCTTCTAGAGTCCTTAGAGTTGAAGGGACAACTTATGATCCGAAAGATGGAGGCATTGTTGATTGGACTTGCTATAACATGGATGCTAACTTGTTAGCCATGGCAGAAATATGTGCTGTTTGTAATGATGCCGGGGTATATTTTGATGGTCGCTTATTTCGAGCCACAGGTTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGGTTTCCAGATATTAAGTCAAGGAACAAAACACGCGATGCGACAAACAACACAAATGATTGCAATAATTTGAAGCTAGGCTGTTGTGAGTGGTGGAATAGAAGATCCAAAAGGGTAGCTACGTTGGAGTTTGACCGCGTTAGAAAGTCAATGAGTGTTATTGTTCGCGAACCAGATGGGCAAAATCGGCTTCTGGTCAAGGGTGCTGTTGAGAGTTTATTGGAGCGAAGTTCATATGTGCAACTTGCCGATGGATCTGTTGTTCCAATAGATGATCAATGCAGGGAACTACTTCTTCAAAGACTCCATGAGATGAGTTCAAAGGGATTGCGTTGCTTAGGTTTAGCATGTAAAGATGAGTTGGGAGAATTTTCAGACTATTATGCAGACACTCATCCTGCTCATAAGAAATTGCTTGATCCAACATACTACTCATCGATTGAAAGCGGTTTAGTTTTTGTTGGCGTTGTTGGTTTAAGAGACCCTCCTAGAGAGGAAGTTCATAAAGCAATTGAGGATTGTAAGCAAGCTGGTATTCGAGTTATGGTAATAACCGGAGATAATAAATCAACAGCTGAGGCTATTTGTAAGGAAATCAAATTGTTCTCTAGAGATGAGGATCTTACAGGTCAAAGTTTGACAGGTAAAGAATTCATGTCTCTTTCTCATTCAGAACAAATTAAATTATTGTTGAGAGAAGGAGGCAAGGTTTTCTCTCGAGCCGAGCCTAGACACAAGCAAGAAATTGTGAGACTATTGAAGGAAATGGGAGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTTGCTGACATAGGGATTGCTATGGGAATAACCGGAACAGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGACAATTTTAGTACTATTGTTTCAGCTATCGCTGAGGGTCGCGCTATTTATAATAACATGAAAGCATTTATAAGGTACATGATATCATCAAATGTTGGGGAAGTAATATCCATATTCTTGACAGCTGCTTTAGGGATACCTGAATGTATGATACCAGTGCAACTTCTGTGGGTGAATTTGGTCACCGATGGTCCACCCGCAACAGCTCTTGGTTTCAACCCTGCTGATGTTGATATTATGCAGAAGCCACCTCGAAAAAGTGACGACACTCTTATAAGTGCTTGGGTTCTTTTCCGTTACCTAGTAATAGGTTCATATGTGGGAATTGCAACAGTTGGCATTTTTGTCTTGTGGTACACACAAGCATCATTTCTTGGCATGAATCTTGTTAGTGATGGACACACAGTCATAGAATTATCACAGCTTCTCAACTGGAGGGAATGTCCTTCATGGTCTAATTTCACCGTTTCTTCATTTGACGCTGGTGGCGGTCGCTTAATCACATTCTCAAACCCCTGTGACTATTTTTCAGTTGGAAAAGTCAAGGCCATGACTCTTTCTCTCTCTGTCTTGGTAGCAATTGAGATGTTTAATTCTTTGAATGCTCTCTCAGAAGAGAATAGCTTGAGGACATTACCACCTTGGAGAAACCCTTGGCTTTTGGTAGCCATGACAATATCTTTAGGACTACATTGTCTCATACTTTACATGCCATTCCTCTCTGAGGTGTTTGGTGTTGCTCCACTAAGTTTAAAGGAGTGGTTTTTGGTGATTCTGATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAATTAGTGGTGAGGAGTCAAAGGAAGAAGACAAAACAGAAAGAAGCATGA 3156 0.4078 MKVPMEEKPFPAWSWSVEQCLKEYSVKLDKGLSSSEVQKRREKYGWNELAKEKGKPLWKLVLEQFDDMLVKILLVAAFVSFLLAYIEGSESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESIKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLRAEQSSLTGEAMPVLKGINPIFLDDCELQAKENMVFAGTTVVNGSCICIVITTAMNTEIGKIQKQIHEASLEESDTPLKKKLDEFGGRLTTSIGIVCLVVWIINYKNFISWDVVDGWPSNIQFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSATEFFTLGGKTTASRVLRVEGTTYDPKDGGIVDWTCYNMDANLLAMAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDIKSRNKTRDATNNTNDCNNLKLGCCEWWNRRSKRVATLEFDRVRKSMSVIVREPDGQNRLLVKGAVESLLERSSYVQLADGSVVPIDDQCRELLLQRLHEMSSKGLRCLGLACKDELGEFSDYYADTHPAHKKLLDPTYYSSIESGLVFVGVVGLRDPPREEVHKAIEDCKQAGIRVMVITGDNKSTAEAICKEIKLFSRDEDLTGQSLTGKEFMSLSHSEQIKLLLREGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAIAEGRAIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKSDDTLISAWVLFRYLVIGSYVGIATVGIFVLWYTQASFLGMNLVSDGHTVIELSQLLNWRECPSWSNFTVSSFDAGGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRTLPPWRNPWLLVAMTISLGLHCLILYMPFLSEVFGVAPLSLKEWFLVILISAPVILIDEILKLVVRSQRKKTKQKEA* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1487 1051 SUPERFAMILY HAD-like 366 831 IPR036412 -
Tpr5g1487 1051 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 700 812 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g1487 1051 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 305 393 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g1487 1051 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 1044 IPR023298 -
Tpr5g1487 1051 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 7 1047 - -
Tpr5g1487 1051 PRINTS P-type cation-transporting ATPase superfamily signature 186 200 - -
Tpr5g1487 1051 PRINTS P-type cation-transporting ATPase superfamily signature 368 382 - -
Tpr5g1487 1051 PRINTS P-type cation-transporting ATPase superfamily signature 619 630 - -
Tpr5g1487 1051 PRINTS P-type cation-transporting ATPase superfamily signature 641 651 - -
Tpr5g1487 1051 PRINTS P-type cation-transporting ATPase superfamily signature 727 746 - -
Tpr5g1487 1051 PRINTS P-type cation-transporting ATPase superfamily signature 751 763 - -
Tpr5g1487 1051 SUPERFAMILY Calcium ATPase, transduction domain A 139 248 IPR008250 -
Tpr5g1487 1051 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 375 623 IPR023299 GO:0000166
Tpr5g1487 1051 Gene3D - 378 626 IPR023299 GO:0000166
Tpr5g1487 1051 Pfam Cation transporting ATPase, C-terminus 812 1038 IPR006068 -
Tpr5g1487 1051 Pfam Cation transporter/ATPase, N-terminus 13 80 IPR004014 -
Tpr5g1487 1051 SFLD Haloacid Dehalogenase 349 780 - -
Tpr5g1487 1051 Gene3D - 63 1040 - -
Tpr5g1487 1051 SMART Cation_ATPase_N_a_2 11 85 IPR004014 -
Tpr5g1487 1051 Pfam haloacid dehalogenase-like hydrolase 618 741 - -
Tpr5g1487 1051 PANTHER CALCIUM-TRANSPORTING ATPASE 7 1047 - -
Tpr5g1487 1051 ProSitePatterns E1-E2 ATPases phosphorylation site. 370 376 IPR018303 -
Tpr5g1487 1051 Gene3D - 365 772 IPR023214 -
Tpr5g1487 1051 Pfam Cation transport ATPase (P-type) 433 544 - -
Tpr5g1487 1051 SFLD p-type atpase 349 780 IPR044492 -
Tpr5g1487 1051 Gene3D - 30 252 - -
Tpr5g1487 1051 Pfam E1-E2 ATPase 133 348 - -
Tpr5g1487 1051 PRINTS Sodium/potassium-transporting ATPase signature 361 382 - -
Tpr5g1487 1051 PRINTS Sodium/potassium-transporting ATPase signature 980 1004 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1487 Tpr-Chr5 28245697 28250967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1487 6 1049 Primary Pumps ATPases(2) AT4G00900 78.721 0.0 1710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1487 K01537 - gmx:100792952 1882.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1487 5 28245697 28250967 Tpr5g1487 5 28245697 28250967 ECH