Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1481 ATGATTTCTGGTTCTGTTTTAGCATTGCATCCTTCTGACAATGTTTTCAGGAGAAGGGAATCTCATGATTTTGAGGAGGACTTTGTAGAGAAAGATCCAACCGGCCGGTACATTAGGTACAATGAAATCTTGGGCAGGGGTGCCTTCAAGACTGTTTATAGGGCATTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTAGGATTGATGGCCTCTTACATTCAGTAGATGATCTTGCAAAATTGTATTCTGAAGTTCATCTATTGAAGTCTTTGAATCATGAAAATATCATTAAGTTCTACGACTCATGGATCGATGATACGCAGAAAACCGTTAACATGATCACTGAACTCTTCACATCTGGAAACTTACGACAGTACCGTAAGAAGCATAAATATGTTGAAGTGAAAGCCATAAAAGGTTGGGCCAGACAGATTCTTCAAGGCTTAGTATATCTTCACGGTCACAAGCCACCTATTATTCACCGAGACTTGAAATGCGACAACATCTTTGTGAATGGAAACCAAGGAGAAGTTAAGATAGGTGATCTCGGTTTGGCAATTGTCATGCAGCAGCCAACTGCTCGGAGCGTTATTGGGACACCGGAGTTTATGGCTCCAGAATTATACGAAGAGGAGTACAATGAACTTGTTGACATCTATTCTTTTGGGATGTCAATGTTGGAGATGGTTACTCTTGAATATCCCTACAACGAATGCACCAACCCAGCTCAAATATTTAAGAAAGTTACCTCGGGCATCAAACCTGCTAACCTTAATAAGGTGAGTGACCCTCAAATTAAGGAGTTTATTGAGAAATGCCTAGTTCCAGCATCTCAGAGATTGTCTGCAGAGGAACTTCTTAATGACCCATTTCTACAAATTGAGAGTCAAAAGGATCCATTCCCGTCTCCTGTTAGAACTCGAAGATCTACATCAAGGGCTGGATCTATGGACATGGATGCTGACTACAAAAATTTTTCCGGGAGTATCTATACTGATAGCAGCCAGGGAAGTCCACATTTTCCAGTTTATCATGTTCAAAGGACTAATAAGAACAACGAGTTTAGGTTAAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCGGATACAAGTGGTCGAGTAAGGAATATACATTTTCTCTTTTACCTTGATACAGACACTGCAGTCTCGGTGGCCTCAGAGATGGTTGAACATTTGGAGCTGGCGGATCATGATGTGGCTTTCATTGCTGAGCTTATTGATTACCTGATAATGAAACTTGTTCCTTGGTGGAAACCTTCGCCTGATCATAACTCAACTGGAGGAACAAGTCTTTGTAGTGGTTCTACAAATGTCGATAGCCAAATGGCATGCCCTTGGAGTTCTATCACAACTAGTGTTTCCTCAGAAGCAGTTAGTGGTCAAGACGTCTTTTCCGGGTTTAACACAATTCCTAGAGATGGTTTAGAGACACCTGGAAAGGCCTGTTTTTACAAAAATGCTGATAATGCTATTTACAAGGGTGCCGTCGATTCTTCTAGTTTGGTTAACTCAGAAGATCGATATTCACGAGGATCAGGAGCTTCTGAGATAGCTGTTGATGATGTTTCAATGAAAAATGCCAATTGTCATGATTCCAAATTTCTCGGTGTTGGATATTTTAAATGCCTAGCAAGGTCGATAACGGGGCTTGAAGTTGGTGATGCGTATTTCGAAGATTGTAAATTGCAGGCAGCAGATTACAATATTGGGGGAAGCACTGTGAACTCAGAATTATCAAATGCTGTGAGCTTGTCAAGTAGCTGTTGTTCTATGTCTTCAACTGAAAAGGATATTGATCTCAAGCTAAAAAATGAACTCGAGGCAATTGAGTCGCAATATCAGAATTGGATTGAGGAACTCACTAGAATGAAATTGGAGGCATTGGAAGCCACTCGAAGGAGATGGATGGCCAAGAAAAAGTAG 1971 0.4074 MISGSVLALHPSDNVFRRRESHDFEEDFVEKDPTGRYIRYNEILGRGAFKTVYRAFDEVDGIEVAWNQVRIDGLLHSVDDLAKLYSEVHLLKSLNHENIIKFYDSWIDDTQKTVNMITELFTSGNLRQYRKKHKYVEVKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMSMLEMVTLEYPYNECTNPAQIFKKVTSGIKPANLNKVSDPQIKEFIEKCLVPASQRLSAEELLNDPFLQIESQKDPFPSPVRTRRSTSRAGSMDMDADYKNFSGSIYTDSSQGSPHFPVYHVQRTNKNNEFRLKGTKNDDNSVSLTLRIADTSGRVRNIHFLFYLDTDTAVSVASEMVEHLELADHDVAFIAELIDYLIMKLVPWWKPSPDHNSTGGTSLCSGSTNVDSQMACPWSSITTSVSSEAVSGQDVFSGFNTIPRDGLETPGKACFYKNADNAIYKGAVDSSSLVNSEDRYSRGSGASEIAVDDVSMKNANCHDSKFLGVGYFKCLARSITGLEVGDAYFEDCKLQAADYNIGGSTVNSELSNAVSLSSSCCSMSSTEKDIDLKLKNELEAIESQYQNWIEELTRMKLEALEATRRRWMAKKK* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1481 656 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 370 426 IPR024678 GO:0004674|GO:0005524
Tpr5g1481 656 SUPERFAMILY Protein kinase-like (PK-like) 32 296 IPR011009 -
Tpr5g1481 656 Gene3D - 368 440 - -
Tpr5g1481 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Tpr5g1481 656 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1481 656 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1481 656 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1481 656 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Tpr5g1481 656 Gene3D Phosphorylase Kinase; domain 1 21 119 - -
Tpr5g1481 656 CDD STKc_WNK 36 295 - -
Tpr5g1481 656 MobiDBLite consensus disorder prediction 300 321 - -
Tpr5g1481 656 Coils Coil 615 656 - -
Tpr5g1481 656 PANTHER KINASE DOMAIN PROTEIN 4 655 - -
Tpr5g1481 656 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1481 Tpr-Chr5 28208994 28214442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1481 25 430 MAP Kinase Kinase Kinase AT5G41990 62.683 1.65e-172 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr5g1481 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1481 K08867 - gmx:100272197 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1481 5 28208994 28214442 Tpr5g1481 5 28208994 28214442 ECH