Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1463 ATGGAGCAAAATTTGAAAGATGACGTGGCAGTAAAAACCGTTACGACCGAGAATTCCGCCGAGAAAACCGGGAAAGTTCGTTGCGGCACACGGCATCCAGTTTACCACGGTGTCCGGAAAAGGCGGTGGGGAAAATGGGTATCGGAGATACGAGAGCCACGGAAGAAGTCACGAATATGGTTAGGATCTTTTCCGGCGCCGGAGATGGCGGCGAAAGCTTACGACGTTGCGGCGTATTGTTTGAAAGGTCGTAAAGCGCAGCTTAATTTTCCTGATGAGGTTCACCGTCTTCCGTTGCTTCCTCCGCCGTCTTCGTGTACTGCTAGGGATATTCAGACGGCGGCGGCTGAAGCTGCTAATATGATGATGGTTAAGGATGTTGCGTCGCCGGAAAATAGTAGCATTGATTCTGGTAGTGGTGGTAGTGATGATTTTTGGGGTGAGATTGAGTTGCCGGAGCTTGTGAATGGAACGTGGTGGAGTTACTCCGTTGATGTTGCGGTGGTGTCGCCGGAGATTGAAATTCCGGCGCAGCAATCCTTCACGGCATGTCTCTAG 558 0.5125 MEQNLKDDVAVKTVTTENSAEKTGKVRCGTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGRKAQLNFPDEVHRLPLLPPPSSCTARDIQTAAAEAANMMMVKDVASPENSSIDSGSGGSDDFWGEIELPELVNGTWWSYSVDVAVVSPEIEIPAQQSFTACL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1463 185 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Tpr5g1463 185 PRINTS Ethylene responsive element binding protein signature 73 93 IPR001471 GO:0003700|GO:0006355
Tpr5g1463 185 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 185 - -
Tpr5g1463 185 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Tpr5g1463 185 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
Tpr5g1463 185 CDD AP2 35 92 IPR001471 GO:0003700|GO:0006355
Tpr5g1463 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 185 - -
Tpr5g1463 185 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Tpr5g1463 185 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Tpr5g1463 185 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1463 Tpr-Chr5 27900957 27901771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1463 30 185 AP2-EREBP Transcription Factor Family AT1G01250 61.963 6.80e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr5g1463 AP2 8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1463 K09286 - gmx:100802845 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1463 5 27900957 27901771 Tpr5g1463 5 27900957 27901771 ECH