Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1446 ATGTCGACTGCATGTTATGATGTGCTTGTGCATGATCCCAATATAATATGGCAAACTGATAATATCCTTTTCAATGAGCTCCCTACTCTTGCCTTTCAAATTGCCACTGCCACAATTATATCTCGTTTTTTTTTCTTTATCTATAAACCTTTTCATCAATCTCAGCTCATTTCACAAATCTCTGTTGGTATTTTTCTAACTCAATTTCTTTGGGGAATTCCAAATATGTTCGGATTGCTTTATCCTAAAACTGGGGTGATCAACATTGACGTTCTAACACATGCTGGTGTCGTATACTACGCATTTCAAACTGGTTTGGAGATGAACTTGGATACCATTTTACATGTAAAAAAGAAACCCGCAACCATTGCGATTTCAGGATTCATCTTTCCAATGGTGATTGGACCAGCATTATACACTCTACATCGAAAAGTTTATGGCAATGGTGAGAAATACCCACTTGAAGAAAGTAAAATAAATGCTTATGTAATGTGGACTTTAGTTCTCACTGTGACAGGATTTCCAGTTGTAGTTCATGCACTTACTGAGCTCAAACTTCTTTATACTCGTCTTGGTAAAATTGCATTAACAACAGCTATGATCAGTGACACATATGCTTGGATTTTATTCACATTAGTTGTTCCATTTTCAATTAATGGTACAAGGGCAATATACTCAGTATTAAGCACCGTAATATTTGTTTTCATTTGCATTTATGTGGCGCGTCCTATCATTGTAAAGGTCATTGATCGCAAGACAGAAAAAGATGAATGGGATGATAACCAATTACTCTTTGTTGTGATGGGAATTTTTGTTTGTGCACACATAACAGACACTCTTGGCACACATGGCATTGTTGGGGCTTTTGTGTACGGGTTGATTTTACCTCACGGTAAATTTGCTGACTTGGTAACATCAGTAATTGATGATTTTGGTGGCGCATTTTTAGTACCACTTTACTTTAGTGGCAGTGGAATGCGACTCTCGTTTACTATCATTTTCCAGCAACCAAATTGGCCTTTAACGCTTATGGTTATAATCTTGTTATGTGTTCTGAAGATTTTAAGCACTTTGTTTGCCACTTTCTTTTTTGGCATGCGCAATCGGGACGGTTTTGCTCTAGGCATAATTCTTAATACCAAGGGTGCTGTTGCACTAATGATGCTCAATACGGCTTGGGATAAATCGATTCTTTCTGTACCAACCTATTCTGTCTTAACTGTCGGAGTCCTTTTAATGACTATAGTGGTACCTCCCATCATAAATATCATATACAAGCCCAGAAAGCAATTTGAGCGAACCAAACTAAAGACTATACAAAAGCTAAGACTTGATGCAGAGCTCAGGATTCTAGCATGTGTTCATAATACTCGCCAGGCTACAGGGATTATCGGCCTTATTGAATCTTTCAATGCCACTAGACTTTCACCAATACATGTTTTTTCACTTTACCTAGTTGAGCTCACAAGACGTACTGGTGCACTTGTTGCTACTTATATGGAGAAGCCTAGTGGCCAGCCTGGAGCACAAAATCTTACAAAATCTCAAGAAGAGCTAGAAAGAATTAACAATAGCTTTGAAGCATTTGGAGAGGCAAATGATGCTGTTAGAGTCCAAACCTTAAATGTTGTGTCAGACTATGAAACCATTCATGAGGATGTATTCAACTCGGCTAACGAAAAGCACACAAGCTTGATTATCCTTCCATTCCACAAACAACTAAGTTCAGAAGGTGCACTAAAAACTATCAATATTGCATATAGAGATATAAACCTGAATGTGATGCAAGGTGCACCTTGCTCTGTGGGAATCTTTGTTGATCGTGATATTGGGCTACTACCGAAAATGAAATTTTGTATTTGTATGATCTTTGTTGGAGGTCCCGACGATCGTGAAGCCTTAGCTATTGCATGGAGGATGGCTGGGCACCCAGGAACCCGATTATCAGTGGTTCGAATGCTCCTATTTGATAAAGCCGCAGAAGTAGACACCTCAAGTCATGCCGAAGCACAAGGAATACTCTCCGTTGTAATGGATAATGAGAAGCAGAAGGATTTAGATGACGAGTATGTGAATTCCTTTAGGCTGATTGGAGTGAATAACAATGATTCTATATCCTATTCAGAGGCTGATGTTCATTCAAGTGAAGATATTCCTACAATACTCAATGAGCTAGAAACATTTGGCTACAATTTATACATAGTTGGTCAAGGGAATCGTAGGAACTCTCAGGTTTTTGCAAATTTATTAGAATGGTGTGATTGTTCAGAACTTGGAGTTATAGGGGATATGTTGGTATCAACAAGTTTTGGTTTGCGTTCATCTGTGTTAGTTGTGCAACAATATGGGTATGGAGGTATGGTTTTGGGAAAACAATCTAACCATGTGACCACTAATAACGATGGTTTTGAGTCACTTGTCGTGAAGGCAGAATAA 2436 0.3842 MSTACYDVLVHDPNIIWQTDNILFNELPTLAFQIATATIISRFFFFIYKPFHQSQLISQISVGIFLTQFLWGIPNMFGLLYPKTGVINIDVLTHAGVVYYAFQTGLEMNLDTILHVKKKPATIAISGFIFPMVIGPALYTLHRKVYGNGEKYPLEESKINAYVMWTLVLTVTGFPVVVHALTELKLLYTRLGKIALTTAMISDTYAWILFTLVVPFSINGTRAIYSVLSTVIFVFICIYVARPIIVKVIDRKTEKDEWDDNQLLFVVMGIFVCAHITDTLGTHGIVGAFVYGLILPHGKFADLVTSVIDDFGGAFLVPLYFSGSGMRLSFTIIFQQPNWPLTLMVIILLCVLKILSTLFATFFFGMRNRDGFALGIILNTKGAVALMMLNTAWDKSILSVPTYSVLTVGVLLMTIVVPPIINIIYKPRKQFERTKLKTIQKLRLDAELRILACVHNTRQATGIIGLIESFNATRLSPIHVFSLYLVELTRRTGALVATYMEKPSGQPGAQNLTKSQEELERINNSFEAFGEANDAVRVQTLNVVSDYETIHEDVFNSANEKHTSLIILPFHKQLSSEGALKTINIAYRDINLNVMQGAPCSVGIFVDRDIGLLPKMKFCICMIFVGGPDDREALAIAWRMAGHPGTRLSVVRMLLFDKAAEVDTSSHAEAQGILSVVMDNEKQKDLDDEYVNSFRLIGVNNNDSISYSEADVHSSEDIPTILNELETFGYNLYIVGQGNRRNSQVFANLLEWCDCSELGVIGDMLVSTSFGLRSSVLVVQQYGYGGMVLGKQSNHVTTNNDGFESLVVKAE* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1446 811 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr5g1446 811 Gene3D - 29 434 IPR038770 -
Tpr5g1446 811 PANTHER CATION/H + ANTIPORTER 13 796 - -
Tpr5g1446 811 PANTHER CATION/H+ EXCHANGER 3 13 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1446 Tpr-Chr5 27611902 27616402 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1446 2 782 Antiporter Super Family AT2G13620 35.985 2.46e-171 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1446 - - gmx:100800072 1159.82