Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1444 ATGTCGACTGCATGTTATGATGTGCCTGTGCATAATCCTAATCAAATATGGCAAACTGATAATATCCTTTTCAAGGAGCTCCCTACTCTTGCCTTTCAAATTGCCTTTACCACAACTATATCTCGTTTCTTTTTCTTTGTCTATAAACCTTTTCATCAATCTCAGCTCATTTCACAAATCTCTACTGGTATTTTTCTAATTCAAGTTCTTTCGAGAATTCCAAATGTTTTCGACTTCATTTTTCCTGGATCTGGGGTGATTAACATTGACGTTGTAACACATGCTGGTGTCGTATACTACGCATTCCTAACTGGTTTGGAGATGAACTTGGATACCATTTTACATGTAAAAAAGAAACCCGCAACCATTGCGATTTTAGGATTCATCTTTCCAATGGTGATGGGACCAGCTTTATACACTCTACATCGAAACGTTTATGGCAATGGTGAGAAATACCCACTTGAAGAAGGTAGAATGAATGCTTATGTAATGTGGACTTTAGTTCTCACTGTGACAGGATTTCCAGTTGTAGTTCATGCACTTACTGAGCTCAAACTTCTTTATACTCGTCTTGGTAAGATTGCATTAACAACAGCTATGATCAGCGACACATATGCTTGGATTTTATTCACATTAGTTGTTCCATTTTCAATTAATGGTACAAGGGCAATATACTCAGTATTAAGCACCGTAATATTTGTTTTCATTTGCATCTATGTGGCGCGTCCTATCATTGTAAAGGTCATTGATCGCAAGACAGAAAAAGATGAATGGGATGATAACCAATTACTCTTTGTTGTGATGGGAATTTTTGTTTGTGCATACATAACAGACACTCTTGGCACACATGGCATTGTTGGGGCTTTTGTGTATGGGTTGATTTTACCACACAGTAAATTTGCTGACATGGTAACATCAACAACTGATGATTTTGGTGGCGCGTTTTTAGTACCACTTTACTTTAGTGGCAGTGGAATGCGCCTCTCGTGTAGTATCATTTTCCAGCAACCAAATTGGCCTTTAACGCTTATGGTTATAATCTTGTTATGTGTTCTAAAGATTTTAAGCACTTTGTTTGCCACTTTCTTTTTTGGCATGCGTAATCGGGATGGTTTTGCTCTAGGCATAATTCTTAATACCAAGGGTGCTGTTGCACTAATGATGCTCAATACGGCTTGGGATAAATCGATTCTTTCTGTACCAACCTATTCTGTCTTAACTGTCGCAGTCCTTTTAATGACTATAGTGGTGCCTCCCATCATCAATATCATATACAAGCCCAGAAAGCATTTTGAACAAACCAAGCTAAAGACTATACAAAAGCTAAGACTTGATGCAGAGCTCAGGATTCTAGCATGTGTTCACAATACTCGCCAGGCTACGGGGATTATCAGCCTCATTGAATCTTTCAATGCCACCAGACTTTCACCAATACATGTTTTTTCACTTTACCTCGTTGAGCTCACAGGACGTGCTGGTGCACTTGTTGCTGCTTATTTGGAGAAGCCTAGTGGCCAGCCTGGAGCACAAAATCTTACAAAATCTCAAGAAGAGCTAGAAAGAATTAACAATAGCTTTGAAGCATTTGGAGAGGCATATGATGCTGTTAGAGTCCAAACCTTAAATGTTGTGTCAGACTATGAAACCATTCATGAGGATGTATTCAACTCGGCTAACGAAAAGCACACAAGCTTGATTATCCTTCCATTCCACAAACAACTAAGTTCAGAATGTGTGCTAAAAACAACCAGTATTGCGTACAGAGATATAAACCTGAATGTGATGCAAGGTGCACCTTGCTCTGTGGGGATCTTTGTTGATCGTGATATTGGTCCGCTACCAAAATTGAAATTTTGTATTTGTGTGATCTTTGTTGGAGGTCCAGACGATCGTGAAGCCCTAGCTATTGCATGGAGGATGGCCGGGCACCCTGGAACACGATTATCAGTGGTTCGAATGCTCTTATTTGATAAAGCTGCCGAAGTAGACACCCCAAGTCACGCTGAACCACAAGGAATACTATCTGTTGAAATGGATAATGATAAGCAGAAGGATTTAGATGACGAGTATGTGAATTTCTTTAGACTAATAGGAGTGAACAACAATGATTCTATATCCTATTCAGAGGTTGATGTTCATTCAGTTGAAGATATTACCTCAGTACTCAATGCGATAGAAAAATTTGGCTACAATTTATACATAGTTGGACAAGGGAATCATAGGAACTCTCAGGTTTTCTCAAATTTATTAGAATGGTGCGATTGTTTAGAACTTGGAGTATTAGGGGATATGTTGGCATCAGAAAATTTTGGTTTGCGCTCATCTGTGCTAGTTGTGCAACAATATGGGTATGGAGGATTGATTTCGGGAAAGCAATCCAACCATGTGACTGCTAATAACAATGGTTTTGAGACACTTGCGTGA 2424 0.3911 MSTACYDVPVHNPNQIWQTDNILFKELPTLAFQIAFTTTISRFFFFVYKPFHQSQLISQISTGIFLIQVLSRIPNVFDFIFPGSGVINIDVVTHAGVVYYAFLTGLEMNLDTILHVKKKPATIAILGFIFPMVMGPALYTLHRNVYGNGEKYPLEEGRMNAYVMWTLVLTVTGFPVVVHALTELKLLYTRLGKIALTTAMISDTYAWILFTLVVPFSINGTRAIYSVLSTVIFVFICIYVARPIIVKVIDRKTEKDEWDDNQLLFVVMGIFVCAYITDTLGTHGIVGAFVYGLILPHSKFADMVTSTTDDFGGAFLVPLYFSGSGMRLSCSIIFQQPNWPLTLMVIILLCVLKILSTLFATFFFGMRNRDGFALGIILNTKGAVALMMLNTAWDKSILSVPTYSVLTVAVLLMTIVVPPIINIIYKPRKHFEQTKLKTIQKLRLDAELRILACVHNTRQATGIISLIESFNATRLSPIHVFSLYLVELTGRAGALVAAYLEKPSGQPGAQNLTKSQEELERINNSFEAFGEAYDAVRVQTLNVVSDYETIHEDVFNSANEKHTSLIILPFHKQLSSECVLKTTSIAYRDINLNVMQGAPCSVGIFVDRDIGPLPKLKFCICVIFVGGPDDREALAIAWRMAGHPGTRLSVVRMLLFDKAAEVDTPSHAEPQGILSVEMDNDKQKDLDDEYVNFFRLIGVNNNDSISYSEVDVHSVEDITSVLNAIEKFGYNLYIVGQGNHRNSQVFSNLLEWCDCLELGVLGDMLASENFGLRSSVLVVQQYGYGGLISGKQSNHVTANNNGFETLA* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1444 807 Gene3D - 29 434 IPR038770 -
Tpr5g1444 807 Pfam Sodium/hydrogen exchanger family 35 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr5g1444 807 PANTHER CATION/H + ANTIPORTER 13 795 - -
Tpr5g1444 807 PANTHER CATION/H+ EXCHANGER 3 13 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1444 Tpr-Chr5 27595470 27598977 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1444 2 782 Antiporter Super Family AT2G13620 36.364 1.97e-173 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1444 - - gmx:100804266 1148.65