Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1443 ATGGTAATTAAGCGTGCTGTGAAATCTGAAATGCCGAAATTGAAACGGTGTAAATTGGATGAACCTGATTCTGAAGGTCTCGAAGGGTGTTCTGGGATTCAGAAGAAGCGTATGGTTAACGAGTTTTACTCGATAGGTGATGCTGATGATTTTAGCAGTGGTTCTGCTTCTTGGAGCAGTGAAGTTTCCCATTGTGATGGTGCTGGTGGTGAGGTTGAGTTTAATTCAAACTCTGTGCTTTTGAATGGTGAAAAGGCGAAAGGGTTTGGCTCGGTGGTTACTCGGCCTCCGTTATTGCGATCCTCACGTGGTCGCCTTCAGATGCTTCCGTCGAGGTTTAGTGACTCTGTTGTTCTTGATGCACGGAAGAATGGAGGAGTGAAAACGGAGGATGGAGATGGTGATTCCATCTTTGAAGATGATAGAAGTTTTGTTGAGGATGGTAAGGTTAAGAATAGTGATTTGTCTAGTGTCGGTAGAAAAACGATGAAGACTGATAGTAATGCTTCTGGTTCTGGTCTTAGCTCTGAGGGTATAGAGCAGAAGACTTATGGGAATGTTGGAAAGAGAAAAGAGGTTTATAGGCCAACGGATTTTGCTTTGGGAGATATTGTTTGGGCAAAATGCGGGAAGAGATATCCGGCTTGGCCTGCTGTGGTGATTGATCCCATGTCACAGGCTCCTTATTCCGTCTTGAACTGTTATGTTCCTGATGCGCTTTGTGTGATGTTTTTCGGTTATTCAAAAAATGGAACTCAAAGGGATTATGCATGGGTCAAGCAGGGAATGATATTCCCATTCTCGGAATTCTTCAATAGATTTCAGGGGCAGACCCAGTTGTACAAGAGCAAACCGAGTGACTTCCAGATGGCGCTGGAGGAGGCAAATTTGGCAAAAGATGGCATGCTGGAATCACATTTGGGAGCGGAGGAAGTGACTGATGTAGAAGCTCATCCTCCTGATAGACTTGAAGAGGTCGTAGTTTCAAATATTGATCAAGAATATTATTGTCAGGATCAGGATACTAGATGTTGTGCTACCTGTGGTTTGATGTTTCCATGTAAAACCATGAAGAAGGTTAAGGGTTCAAGTTATGCCCTCCAATTTCAATGCAAACTTTGTGCCAAGTTACTAAAATCAAAACAATATTGTGGAATTTGCAAAAAGATTTGGCTCCATTCAGACGGTGGGAATTGGGTATGTTGTGATGGTTGCAATGTATGGGTGCATGCTGAGTGTGACAGAATTTCTACCGAACATTTCAAGGATCTGGAAAATACCGATTACTATTGTCCAGATTGCAAGGAAAGAATCAATTGTAAATTACCGGAATCATCAACATGCAAGTCAAAAATCAAATCAGTGGAGAATAGCCAAAATGGTGTGGTACCTGAGAAGGTAACAGTGGTGTGCAATGGAATGGAAGGAGTTTACTTCCCTAAGCTTCATTTAATTATGTGCAAGTGTATCTCTTGTGGTTCAAGGAAGCAGACACCGAGTGAATGGGAACGACATACTGGAAGCAGAGCCAAAAAATGGAAATGCAGTGTGAAAGTGAAAAGCACAATGCTACCACTTGAAAAATGGCTTGCGGAGCACATTTCACAAGATGGAATTCCCCAGGTATTAGATCAGCAGCAGGTGCTTGCCTTTTTGCAAGAGAAGTATGAGCCAGTTCATGCAAAATGGACGCCGGAAAGATGTGCTGTTTGTAGATGGGTTGAAGATTGGGACGATAACAATATGATTATATGTAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGTGTAAAGAATGTTCAAGATTTTACTTCTTGGGTCTGTAGAGTATGTGAAACTCCTGATGTTGAAAGAGAGTGTTGCCTTTGTCCAGTAAAAGGTGGTGCTCTGAAGCCAACTGATGTCGAGATGTTGTGGGTTCATGTAACATGCGCTTGGTTTCGACGTGAAGTTGTTTTCCAAGACCCTTTGGCCATGGAACCTGCCCTTGGAATTCTAAGAATTCCTCCTAATTCCTTTGTGAAGACTTGTGTAATTTGTAAACAACGCCATGGTTCTTGTACAAGTTGTTGCAAGTGTGCTACTTATTTTCATGTAATGTGCGCATCAAGAGCTGGGTATACCATGGAATTGCATGGCATGGAGAAGAACGGGACTCAAATAACAAAGAAGCTAATATACTGTGCAGTTCATAGAGTCCCAAGTCCAGATTCTGTAATGGTTTCACATTCATCTCTGGGGATTTTCTCTCCCAGAATGTTGACTCAAAATCACAAGGGATACTTCCGGGGATCAAGGCTGGTTTCATCAAAAAATATAGAGCTCAATGAGTTTTCAACTGAAAATGATAAGGTTGAGCCATTTTCTGCAGCCAGATGTCGTGTGTACAAGAGGCCTCGTAATAAGAGAGCTGATGTGCCAATAATTCACTTGCTGACGGGACCCAGCCGTCACTCTTTAGGTGAAATAACTCAATTGAACAACTATGAGGATGCTAAAGTTGCTAAAGTAGTATTTCCTTCTTTCAAGGAACGTCTTCACCATCTGCAGAAAACTGAAAAACTCAGGGTTTGCTTTGGAAAGTCGGGTATTCATGGATGGGGTCTCTTTGCTCGAAGAGATATACAAGAAGGAGATATAGTTGTTGAGTATCGTGGAGAGCAGGTAAGGCGCAGTGTCGCCGATCTGAGGGAAGCAAAATATCGTTCAGAAGGCAAAGATTGCTATTTGTTCAAGATCAGTGAGGAAGTAGTCATTGATTCAACAAACAAGGGCAATATAGCACGTTTAATAAACCACTCTTGCATGCCAAACTGCTATGCAAGGATTTTGAGTTTGGGCGATCAACAGAACCGGATTGTTCTTGTTGCCAAAACCAATGTTTCTGCTGGTCAAGAACTAACGTATGATTACTTGTTCGATCCAGATGAGCCGGAAGAACAGAAAGTTCCCTGCCTTTGCAGAGCACCGAAGTGTAGAAAATTTATGAACTAG 3000 0.4233 MVIKRAVKSEMPKLKRCKLDEPDSEGLEGCSGIQKKRMVNEFYSIGDADDFSSGSASWSSEVSHCDGAGGEVEFNSNSVLLNGEKAKGFGSVVTRPPLLRSSRGRLQMLPSRFSDSVVLDARKNGGVKTEDGDGDSIFEDDRSFVEDGKVKNSDLSSVGRKTMKTDSNASGSGLSSEGIEQKTYGNVGKRKEVYRPTDFALGDIVWAKCGKRYPAWPAVVIDPMSQAPYSVLNCYVPDALCVMFFGYSKNGTQRDYAWVKQGMIFPFSEFFNRFQGQTQLYKSKPSDFQMALEEANLAKDGMLESHLGAEEVTDVEAHPPDRLEEVVVSNIDQEYYCQDQDTRCCATCGLMFPCKTMKKVKGSSYALQFQCKLCAKLLKSKQYCGICKKIWLHSDGGNWVCCDGCNVWVHAECDRISTEHFKDLENTDYYCPDCKERINCKLPESSTCKSKIKSVENSQNGVVPEKVTVVCNGMEGVYFPKLHLIMCKCISCGSRKQTPSEWERHTGSRAKKWKCSVKVKSTMLPLEKWLAEHISQDGIPQVLDQQQVLAFLQEKYEPVHAKWTPERCAVCRWVEDWDDNNMIICNRCQIAVHQECYGVKNVQDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRREVVFQDPLAMEPALGILRIPPNSFVKTCVICKQRHGSCTSCCKCATYFHVMCASRAGYTMELHGMEKNGTQITKKLIYCAVHRVPSPDSVMVSHSSLGIFSPRMLTQNHKGYFRGSRLVSSKNIELNEFSTENDKVEPFSAARCRVYKRPRNKRADVPIIHLLTGPSRHSLGEITQLNNYEDAKVAKVVFPSFKERLHHLQKTEKLRVCFGKSGIHGWGLFARRDIQEGDIVVEYRGEQVRRSVADLREAKYRSEGKDCYLFKISEEVVIDSTNKGNIARLINHSCMPNCYARILSLGDQQNRIVLVAKTNVSAGQELTYDYLFDPDEPEEQKVPCLCRAPKCRKFMN* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1443 999 ProSiteProfiles Post-SET domain profile. 983 999 IPR003616 -
Tpr5g1443 999 SMART set_7 857 980 IPR001214 GO:0005515
Tpr5g1443 999 SUPERFAMILY FYVE/PHD zinc finger 380 442 IPR011011 -
Tpr5g1443 999 CDD PHD_ATX3_4_5_like 567 613 IPR042011 -
Tpr5g1443 999 ProSitePatterns Zinc finger PHD-type signature. 568 613 IPR019786 -
Tpr5g1443 999 Pfam SET domain 868 973 IPR001214 GO:0005515
Tpr5g1443 999 Pfam PHD-finger 580 614 - -
Tpr5g1443 999 ProSiteProfiles Extended PHD (ePHD) domain profile. 619 734 IPR034732 -
Tpr5g1443 999 ProSiteProfiles PWWP domain profile. 201 270 IPR000313 -
Tpr5g1443 999 MobiDBLite consensus disorder prediction 155 177 - -
Tpr5g1443 999 SUPERFAMILY SAND domain-like 465 525 IPR010919 -
Tpr5g1443 999 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 376 440 IPR013083 -
Tpr5g1443 999 PANTHER PHD FINGER PROTEINS 1 999 - -
Tpr5g1443 999 SMART PWWP_4 199 268 IPR000313 -
Tpr5g1443 999 CDD SET_SETD1-like 846 995 - -
Tpr5g1443 999 Gene3D SET domain 839 999 IPR046341 -
Tpr5g1443 999 SMART PHD_3 567 614 IPR001965 -
Tpr5g1443 999 SMART PHD_3 383 435 IPR001965 -
Tpr5g1443 999 SMART PHD_3 678 734 IPR001965 -
Tpr5g1443 999 Gene3D - 460 539 IPR010919 -
Tpr5g1443 999 Gene3D - 192 304 - -
Tpr5g1443 999 ProSiteProfiles Zinc finger PHD-type profile. 565 616 IPR019787 -
Tpr5g1443 999 SUPERFAMILY Tudor/PWWP/MBT 192 309 - -
Tpr5g1443 999 SUPERFAMILY SET domain 850 996 IPR046341 -
Tpr5g1443 999 Pfam PHD-zinc-finger like domain 621 733 - -
Tpr5g1443 999 ProSiteProfiles Zinc finger PHD-type profile. 381 437 IPR019787 -
Tpr5g1443 999 CDD PHD_TCF19_like 384 434 - -
Tpr5g1443 999 Pfam PWWP domain 202 297 IPR000313 -
Tpr5g1443 999 SMART PostSET_3 983 999 IPR003616 -
Tpr5g1443 999 ProSiteProfiles SET domain profile. 857 974 IPR001214 GO:0005515
Tpr5g1443 999 Pfam PHD-finger 383 436 IPR019787 -
Tpr5g1443 999 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 999 IPR025780 -
Tpr5g1443 999 SUPERFAMILY FYVE/PHD zinc finger 566 630 IPR011011 -
Tpr5g1443 999 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 563 616 IPR013083 -
Tpr5g1443 999 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 617 735 IPR013083 -
Tpr5g1443 999 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 999 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1443 Tpr-Chr5 27553955 27563128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1443 568 720 C2H2 Transcription Factor Family AT3G14740 33.750 2.28e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Tpr5g1443 zf-HC5HC2H_2 3.1e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1443 - - cam:101496041 1635.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1443 5 27553955 27563128 Tpr5g1443 5 27553955 27563128 ECH