Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1428 ATGGGAGAAAATAATAAGTGTGAAGAAATTGGAGTCATTGGTGAATTAATGCAAGGAGAGGAGCTAACAAAGAAGCTTTATGATCAAATCTCTCCATCATCATCACCATCATCATCTTCAACATCATCATCATCATCATCATCACATGTAGCTAATGGAGTCTTAATTGACAAAATAATTTTGTCCATTGAGAAAGCAATAACAATGGTGAAGGGTAATGTTGGAAAAATTAAGACAAACAATGTTAACATGATGGATTCTCATTGTTCAAATGGAAGTCCCAAAAGTGAGGTCCAAGATTCAGGTTTCAAGCACAAACATGTTTCAAAGAAAAGAAAAACCAACCCTAAGTGGACAGAACAAGTTAAGGTGTATTTAGGAACAGCACCTGAAGGGACTGTGGAGGATGGTTATAGCTGGAGAAAGTATGGACAAAAGGATATTCATGGAGCCAAGTTTCCAAGGGGATATTATAGATGCACACATAGAAATTCACAAGGTTGTCTAGCTACTAAACAAGTGCAAAAATCAGAAGAAGATTCAATGGTATATGAGATAACCTACAAAGGAAGACACACATGCACCCAAACTAGTAATTTGAACAAGGCAAACCCATCAAAAAAGTTGAAATTTGGACAAAATAAATCACAACCCAATCAAAAAATTCAACCACAAGAAGAGAAAATTCAACCATCTCAAGAGAAAACTTTTTCTTTTGACAACAAAGAGGAAATATTCCCATCATTCAATTTTTCCTCTCCATCAATAGGATCTGAAAATGAGGATAACATGTTTTTAGAGACCATGATTAAAAACAATTTCATGGAAAATGAGAATAACAATATATTCTCAGAATCAAATAATTTCTGCTTGTCACTTTTGGATTTGGACAACATTGAACTAAGCCCAAGTGAGTCACTATTGGATTTGGACAGCATTGAATTAAGCCCAAGTGAGTTGATTTCAGGCCCAAATTCAGTTGTCAATTCCCCAATAGATTTTGATTTTTTTAGTGACATAAATTGTGACGTGGATTTCTCTATAAGACAGTTCATGTGA 1059 0.3466 MGENNKCEEIGVIGELMQGEELTKKLYDQISPSSSPSSSSTSSSSSSSHVANGVLIDKIILSIEKAITMVKGNVGKIKTNNVNMMDSHCSNGSPKSEVQDSGFKHKHVSKKRKTNPKWTEQVKVYLGTAPEGTVEDGYSWRKYGQKDIHGAKFPRGYYRCTHRNSQGCLATKQVQKSEEDSMVYEITYKGRHTCTQTSNLNKANPSKKLKFGQNKSQPNQKIQPQEEKIQPSQEKTFSFDNKEEIFPSFNFSSPSIGSENEDNMFLETMIKNNFMENENNNIFSESNNFCLSLLDLDNIELSPSESLLDLDSIELSPSELISGPNSVVNSPIDFDFFSDINCDVDFSIRQFM* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1428 352 MobiDBLite consensus disorder prediction 26 48 - -
Tpr5g1428 352 Pfam WRKY DNA -binding domain 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1428 352 Gene3D WRKY domain 118 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr5g1428 352 ProSiteProfiles WRKY domain profile. 129 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1428 352 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1428 352 MobiDBLite consensus disorder prediction 27 48 - -
Tpr5g1428 352 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 348 - -
Tpr5g1428 352 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 348 IPR044810 GO:0003700
Tpr5g1428 352 MobiDBLite consensus disorder prediction 90 114 - -
Tpr5g1428 352 SUPERFAMILY WRKY DNA-binding domain 132 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1428 Tpr-Chr5 27298611 27301899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1428 8 346 WRKY Transcription Factor Family AT2G46400 33.048 3.63e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr5g1428 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1428 - - aprc:113849885 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1428 5 27298611 27301899 Tpr5g1428 5 27298611 27301899 ECH
Tpr5g1428 5 27298611 27301899 Tpr6g0082 6 694478 696277 ECH
Tpr3g0573 3 5667456 5669278 Tpr5g1428 5 27298611 27301899 ECH
Tpr6g0082 6 694478 696277 Tpr5g1428 5 27298611 27301899 PCT