Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1412 ATGGGAAACAGTGAGGATGGGAAATCCATTAAGATTGAAAAGCCTTCTTCACCTGTAACAACTGATCAGATCAATCAAACCAACCAGCATAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCAAAGAGTCAACATTCCACCATACTTCAACTCAACTGTTGCTTCTGGTCATGCTCCTCACCCATACATGTGGGGACCGCCACAGCCTATGGTTCATCCATATGGGCCGCCTTATGCATCATTTTATCCACATGGAGGGGTTTATACTCACCCTGCGGTTGCCGTCGGGCCAAATTCACATGGTCAAGGAATTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGCATAGAGACACCAACCAAATCATCTGGAAACACTGATCATGGTTTAATGAAAAAATTGAAAGGATTTGACGGGCTTGCGATGTCAATAGGCAACGGCAATGCTGAGAGTGCTGAGCGTGGAGCGGAAAATAGGCTATCACGGAGTGTGGATACTGAGGGTTCCAGCGATGGAAGTGATGGCAACACTACTGGGACCAATGGAACGAGGAAAAGGAGCCGGGATGGAACACCAACAACCACAGATGGAGAAGGGAAAACTGAGATGCAAGATAGTCCGGTTTCCAAAGAGAATGCAGCTTTCAAAAAGACGCTATCAGTTGCTCCAGCCAGTGTTGCAGAAAAGATTGTTGGACCTATACTTTCTTCAGGTATGACCACAGCACTCGAGCTGAGGAACCCTTCCACCATTTCCGCCGCTGCTGCACAACCTTGTGGAGTTTTGCCTCCGGAAGTTTGGATGCAGAATGAGCGTGAGCTGAAACGTGAGAAGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGGTTGAGGAAGCAGGCCGAGGCTGAAGAACTGGCACGAAGAGTTGATGCATTGACTTCTGAGAATTTGTTGCTGAAATCAGAAATGAATGAATTGGCTCAAAACTCTGAGAAGCTGAAGATGGAAAATGCTACATTAAAGGAAAAGCTGAAAAACACTCAACTGGGACAAACAGAAGAGATAATTTTGAACAACATTGACAATAGAGCTACACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAACAATTCCAATTCTGATGATAGAACTGCAGAAGAAGAGAATGGTTTCTGTGAGAACAAACCAAATTCAGGTGCAAAGCTGCATCAACTACTTGATACAAATCCTAGAGCTAATGCTGTTGCAGCTAGTTGA 1266 0.4502 MGNSEDGKSIKIEKPSSPVTTDQINQTNQHNIHVYPDWAAMQAYYGQRVNIPPYFNSTVASGHAPHPYMWGPPQPMVHPYGPPYASFYPHGGVYTHPAVAVGPNSHGQGIPSSPAAGTPSSIETPTKSSGNTDHGLMKKLKGFDGLAMSIGNGNAESAERGAENRLSRSVDTEGSSDGSDGNTTGTNGTRKRSRDGTPTTTDGEGKTEMQDSPVSKENAAFKKTLSVAPASVAEKIVGPILSSGMTTALELRNPSTISAAAAQPCGVLPPEVWMQNERELKREKRKQSNRESARRSRLRKQAEAEELARRVDALTSENLLLKSEMNELAQNSEKLKMENATLKEKLKNTQLGQTEEIILNNIDNRATPVSTENLLSRVNNSNSDDRTAEEENGFCENKPNSGAKLHQLLDTNPRANAVAAS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1412 421 MobiDBLite consensus disorder prediction 106 133 - -
Tpr5g1412 421 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Tpr5g1412 421 SUPERFAMILY BLRF2-like 324 391 - -
Tpr5g1412 421 Pfam Disordered region downstream of MFMR 133 260 - -
Tpr5g1412 421 MobiDBLite consensus disorder prediction 202 216 - -
Tpr5g1412 421 MobiDBLite consensus disorder prediction 281 302 - -
Tpr5g1412 421 MobiDBLite consensus disorder prediction 168 194 - -
Tpr5g1412 421 MobiDBLite consensus disorder prediction 151 216 - -
Tpr5g1412 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Tpr5g1412 421 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Tpr5g1412 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 284 299 IPR004827 GO:0003700|GO:0006355
Tpr5g1412 421 SUPERFAMILY Leucine zipper domain 280 336 IPR046347 GO:0003700|GO:0006355
Tpr5g1412 421 MobiDBLite consensus disorder prediction 376 421 - -
Tpr5g1412 421 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 421 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tpr5g1412 421 PANTHER G-BOX-BINDING FACTOR 3 1 421 - -
Tpr5g1412 421 MobiDBLite consensus disorder prediction 104 138 - -
Tpr5g1412 421 Gene3D - 280 333 - -
Tpr5g1412 421 Pfam bZIP transcription factor 277 339 IPR004827 GO:0003700|GO:0006355
Tpr5g1412 421 Coils Coil 290 345 - -
Tpr5g1412 421 MobiDBLite consensus disorder prediction 1 21 - -
Tpr5g1412 421 CDD bZIP_plant_GBF1 282 330 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1412 Tpr-Chr5 27088172 27094111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1412 1 420 bZIP Transcription Factor Family AT2G46270 49.417 1.15e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr5g1412 MFMR_assoc 1.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1412 K09060 - gmx:778133 641.343