Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1395 ATGTGTAGTTTCTATTTCTTCTTCATCTTCTCCATAATCTTCTTCTTCTTAACACCATTAACATTATCTTCAGAACCAAGAAGATTCCTTCATCAACCTTTTCTCCCTCAAAACTCACTCTCACCTTCTCAATCACCGAACCCATCTCCACCTTCTCAATCATCATCATCATCATCACCAAATCCAAAACTACCATTTTCCACAACTACCCCTAACACTTCTTCATCATCAAATACAAATACACCCCCTTTTTTCCCAACATACCCTCCACCACCACCTTCACCTTCTTCTTTCGCTTCATTCCCTGCTAACATCTCTTCTCTTATTCTTCCTCAATCCTCTAAACCCAAATCTTCTTCTTCCAAACTACTTGCCGTCGCCATTACCGCCGTCATCGCCGCCGTAGCTGTTGTTTCTATTTCAGCTTTCATTTACTGCCGCAGAAGAAGAAAAAGCTTCTCCGGTGATGATAAAACACTCAGATCCGATAGTAGTATTCGTCTTTTTCCTCGGGAAGGTGGTGGTGCCGGAGGCGCCACTACCGCCACCACCGTCGTGAAGTCGAGGAATGTTTCTTCTAATAGCTCAGAGTTTCTTTATCTTGGTACCATTGTTAACTCTCGTGGTGATGATCTACCTAATGGTGGCAGTGGTGGTGGTCGGAATCCTAGAAAAATGGACTCGCCGGAGCTTCAACCGTTACCGCCGCTTGCGCGACAAGGTTCACGGCGAGTTTACGATGAAGGTGTGAATGGTGGTGAGGATGAAGAAGAAGAGTTTTATTCGCCGAGAGGTTCTTTGAACGGAATTGGATCGGGTTCTCGGAGAGTTTTCGCCGGAATTTCAGCTGAGAATTTGGTGGGTCGGAGTAGTAGTGAATCTACTTCATCTTCTTCTTATTCATCTTCTTCTGTTTCACCGGATCGTTCTCATTCGATTAGTCTCTCGCCGCCGGTTAGTTTAAGTCCAAGAAGATCACAGTCAAAGTCGCCGGAAAATGTAATCACACCGCCACCGACACAGCCATTACTTAGCACCGACGGTGGAAGAAGCTCGTTTTCTTCATCAACAGTTTCTTCTCCACGAGCTTCTTCAAATTTGAACGTGAAGTCTTCTTGTTCAATGTCTTCAACGCCGGAGAAAAATTTCGCCGGAGAATGTCAATCACCGTCTTTATCACCTTTGAATCTTTCACCGATGAAAAACTCAGATGGGTCTTTTGTTAAAGTGGAAAAGACTCAATCTTGTAATGAAGATGGTTCTTCTCCGAGATTATCTAATGCTTCTAGTGGTAAATCTTCTTCGGCGTTTAGTTTGCCGTCGCCGGAGAAAATGACGATGATGCAAGATCATAATAATCATGGGTTGGATCAGTCTCCAACTATTTCAGATGTTTCAGATCGGTTTAGACATTCTCCTTTGTCATCATTACCACTTTCGCCGACGCTTCTATCATCACCGGAGAGAGAGATGAACACGATGAACATGATAAACACGATGAACATGATGAACATGATGAACACTCAACCACCACCGCCTCCACCACCACCGCCTTCTAGGAAGCATCGGGAGATTCCTGACCTTTTAACACCAATTGCTGAATCACCAACTGTTTTGATTCAACATGGTGTTGTATCTCAAAGAAAACAATGGGAAATTCCGGTTCTTACAACACCAATTGCACCTTCTATTAGTGTTTCATCAGCTCCTCCACCACCACCGCCGCCACCACCACTGGCAATGCCGTTGCGACAAAGGAAGCAATGGGAAGTACCTTCTCCAACAACTCCTGTTGGTCAATCGGTGGTTTATAGGCCGCCGGAATTGAAACCTCCTTCGAGACCTTTTGTGTTGCAAACACCTCCTAATACATTGGTTTCTCCGGTTGAATTGCCACCTAGTTTTGAGGAGAATGCTGAAGAGGTTTCTAAACCAAAGTTAAAACCTTTGCATTGGGATAAAGTGAGAGCTAGTTCCGATCGTGAAATGGTTTGGGATCATTTGAGATCAAGCTCTTTTAAGTTGAATGAGGAAATGATAGAAACATTGTTTGTGGTGAACACACCGAATCCAAAACCAAAAGATTCTACGCCACGTTCAGTTCTTGCACCTCAACATCATGAGGATAGGGTATTGGATCCTAAAAAGTCACAAAATATTGCTATCTTGCTTCGAGCGGTTAACGTTACAGTAGAGGAAGTGTGTGAATCACTGTTAGAAGGTGTTACTGATACACTTGGAACCGAACTACTTGAAAGCTTGTTAAAAATGGCGCCAACCAAGGAAGAAGAGCGTAAATTGAAGGAACATAAAGACGACTCTCCAAACAAACTCGGTCCTGCTGAGAAATTTTTGAAGGCAGTTCTCGATGTACCTTTCGCATTTAAAAGGGTGGAAGCTATGCTTTACATAGCCAATTTTGAGTCTGAAGTGGAGTATCTTCGTAAATCGTTTCAAACTCTAGAGGTTGCATGTGAAGAGCTACGAAACAGTAGAATGTTCTTGAAGCTTCTAGAAGCTGTGCTCAAAACCGGAAACCGCATGAACGTTGGAACAAACCGAGGTGATGCACATGCATTCAAGCTCGATACACTTCTCAAGCTGGTTGATGTCAAAGGTGCAGACGGAAAAACAACTCTTCTACACTTTGTTGTACAAGAAATCATTAGAACCGAAGGAGCTCGTCATTCGGATACTACTACTAATCAAACACCGGCTACAATATTGAGCGACGACACCAAGTGTAGAAGACTCGGCCTTCAAGTAGTATCTAGTCTAAGTTCCGATCTAGCCAATGTGAAGAAAGCCGCAGCGATGGACTCCGAAGTTCTCACAAGCGAAGTCTCTAAACTTTCAAAAGGAATCACACACATTGCCGAGATCGTGAAACTGAATCAAACGGCGGGATCAGACGAAACCGTTAAAAAATTCACAGAATCAATGAACAAGTTCATGAGAATGGCTGAGGAGGAGATTGTTAGAATTCAAGCACAAGAAAGTGTTGCTTTATCACTTGTGAAGGAAATCACAGAGTATTTTCATGGAAACTTGTCTAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTTTTAAATGTTCTTGATAGGGTATGCAGAGAAGTTGGTAATATAAATGAAAAGACCATGATTAGTTCAGCTCATAGATTTCCAGTTCCCGTGAACCCTATGCTTCCACAACCACTTCCTGGATTACATGGAAGGAGAAATTACAGCTCCTCAGACGATGAGAGTTCGTCTTCTTAG 3276 0.4301 MCSFYFFFIFSIIFFFLTPLTLSSEPRRFLHQPFLPQNSLSPSQSPNPSPPSQSSSSSSPNPKLPFSTTTPNTSSSSNTNTPPFFPTYPPPPPSPSSFASFPANISSLILPQSSKPKSSSSKLLAVAITAVIAAVAVVSISAFIYCRRRRKSFSGDDKTLRSDSSIRLFPREGGGAGGATTATTVVKSRNVSSNSSEFLYLGTIVNSRGDDLPNGGSGGGRNPRKMDSPELQPLPPLARQGSRRVYDEGVNGGEDEEEEFYSPRGSLNGIGSGSRRVFAGISAENLVGRSSSESTSSSSYSSSSVSPDRSHSISLSPPVSLSPRRSQSKSPENVITPPPTQPLLSTDGGRSSFSSSTVSSPRASSNLNVKSSCSMSSTPEKNFAGECQSPSLSPLNLSPMKNSDGSFVKVEKTQSCNEDGSSPRLSNASSGKSSSAFSLPSPEKMTMMQDHNNHGLDQSPTISDVSDRFRHSPLSSLPLSPTLLSSPEREMNTMNMINTMNMMNMMNTQPPPPPPPPPSRKHREIPDLLTPIAESPTVLIQHGVVSQRKQWEIPVLTTPIAPSISVSSAPPPPPPPPPLAMPLRQRKQWEVPSPTTPVGQSVVYRPPELKPPSRPFVLQTPPNTLVSPVELPPSFEENAEEVSKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFVVNTPNPKPKDSTPRSVLAPQHHEDRVLDPKKSQNIAILLRAVNVTVEEVCESLLEGVTDTLGTELLESLLKMAPTKEEERKLKEHKDDSPNKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARHSDTTTNQTPATILSDDTKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLTSEVSKLSKGITHIAEIVKLNQTAGSDETVKKFTESMNKFMRMAEEEIVRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLNVLDRVCREVGNINEKTMISSAHRFPVPVNPMLPQPLPGLHGRRNYSSSDDESSSS* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1395 1091 MobiDBLite consensus disorder prediction 39 79 - -
Tpr5g1395 1091 SMART it6_source 637 1053 IPR015425 -
Tpr5g1395 1091 MobiDBLite consensus disorder prediction 1072 1091 - -
Tpr5g1395 1091 SUPERFAMILY Formin homology 2 domain (FH2 domain) 570 1051 - -
Tpr5g1395 1091 PANTHER FORMIN-RELATED 5 1091 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr5g1395 1091 PANTHER FORMIN-LIKE PROTEIN 1 5 1091 - -
Tpr5g1395 1091 MobiDBLite consensus disorder prediction 56 79 - -
Tpr5g1395 1091 ProSiteProfiles Formin homology-2 (FH2) domain profile. 637 1064 IPR015425 -
Tpr5g1395 1091 Gene3D Formin, FH2 domain 634 1048 IPR042201 -
Tpr5g1395 1091 MobiDBLite consensus disorder prediction 411 439 - -
Tpr5g1395 1091 MobiDBLite consensus disorder prediction 288 373 - -
Tpr5g1395 1091 MobiDBLite consensus disorder prediction 209 245 - -
Tpr5g1395 1091 Pfam Formin Homology 2 Domain 642 1038 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1395 Tpr-Chr5 26915684 26920629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1395 603 1079 FH2 protein (formin) Gene Family AT3G25500 74.741 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1395 - - gmx:100800333 1214.91