Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1385 ATGCCGAAGAACAAAGGAAAGGGAGGAAAGAATCGGAAGAGAGGAAAGAACGAAGCAGATGACGAGAAACGCGAACTGATTTTCAAAGAAGACGGTCAAGAATACGCTCAAGTTCTCCGTATGCTTGGTAACGGTCGTTGTGAAGCTAATTGTTTTGACGACAATGGCGGAAAGAAACGTCTCTGTCATATTCGTGGTAAGATGCACAAAAAGGTCTGGATTGCTGCCGGTGATATAATTCTCGTCGGACTTCGCGATTATCAGGATGATAAATCTGATGTTATTCTGAAATATATGCCTGATGAAGCTAGGCTTCTTAAGGCTTATGAGGAGCTTCCTGATAGTGTTAGACTTAATGAAGGTATTGCTGGTGGTCTTGATGAAGATGAGGATTTTGGTGCTGATTACATTGAGTTTGAAGATGAAGATATTGATAAGATTTAG 444 0.4099 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEANCFDDNGGKKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKSDVILKYMPDEARLLKAYEELPDSVRLNEGIAGGLDEDEDFGADYIEFEDEDIDKI* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1385 147 Gene3D - 2 147 IPR012340 -
Tpr5g1385 147 MobiDBLite consensus disorder prediction 1 25 - -
Tpr5g1385 147 SMART eIF1neu4 28 113 IPR001253 GO:0003743|GO:0006413
Tpr5g1385 147 PANTHER EIF-1A 1 147 IPR001253 GO:0003743|GO:0006413
Tpr5g1385 147 Hamap Translation initiation factor 1A [eif1a]. 16 113 IPR001253 GO:0003743|GO:0006413
Tpr5g1385 147 ProSiteProfiles S1 domain IF1 type profile. 22 99 IPR006196 GO:0003723|GO:0003743|GO:0006413
Tpr5g1385 147 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 112 IPR001253 GO:0003743|GO:0006413
Tpr5g1385 147 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A 1 147 - -
Tpr5g1385 147 SUPERFAMILY Nucleic acid-binding proteins 2 146 IPR012340 -
Tpr5g1385 147 CDD S1_IF1A 33 112 IPR001253 GO:0003743|GO:0006413
Tpr5g1385 147 Pfam Translation initiation factor 1A / IF-1 32 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1385 Tpr-Chr5 26798706 26799359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1385 1 147 Eukaryotic Initiation Factors Gene Family AT2G04520 83.108 3.27e-81 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1385 K03236 - pda:103697054 252.292