Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1368 ATGGCTGACGAATCAGAAAGCACGGTGACCGCGGTGAGTCGTGACGGCGGCGATTCGTTGCTTGAAAAGATCACTGAGAAACTTCACTTTGATGATTCTTCCTCCGATTCATCGGATTCACATTCTGATACCGATAAACCGGTTGTTGAGTCCGTTAAGGAGAAGGTTTTTCGTCTTTTTGGAAGGGAGAAGCCTGTTCATTCTGTCCTTGGTGGAGGAAAGCCTGCTGATGTGTTCTTATGGAAGAACAAGAAGATATCTGCTGGAGCACTTGGTGTAGCAACTGCAATTTGGGTGTTTTTTGAGCTGCTTGAATATCACTTTCTTACTCTCATTTGTCACATATCGATTTTGGTGCTTGCCCTGTTGTTTTTGTGGTCCAATGCTCATACCTTCCTTCATAAGACTCCACCTCGCATACCAGTGGTTCATCTACCAGAGGAACCAGTTTTGCAAATTGCATCTGCATTGAGAATTGAAATCAACCGAGGATTTTCTGCCTTGCATAATATTGCTTCTGGAAGAGATTTGAAGAAATTCTTCATTGTTGTTTTTGGCTTGTGGATTGTATCAATTGTGGGGAGCTGGACCAATTTCTTGACCCTTTTCTACATAACTTTTGTTTTGTTGCACACTGTTCCTTTTGTGTATGATAAGTATGAGGACAAGATAGACCCTCTGGCCGAAAAAGCATTCATTGAGATTAAAAAGCAGTATGCAGTGTTTGATGAAAAGGTCTTAAGTAAGGTCTTGAGTAAGATTCCAATAGGTGCATTGAAAGGTAAGTTAGCTTAG 795 0.4151 MADESESTVTAVSRDGGDSLLEKITEKLHFDDSSSDSSDSHSDTDKPVVESVKEKVFRLFGREKPVHSVLGGGKPADVFLWKNKKISAGALGVATAIWVFFELLEYHFLTLICHISILVLALLFLWSNAHTFLHKTPPRIPVVHLPEEPVLQIASALRIEINRGFSALHNIASGRDLKKFFIVVFGLWIVSIVGSWTNFLTLFYITFVLLHTVPFVYDKYEDKIDPLAEKAFIEIKKQYAVFDEKVLSKVLSKIPIGALKGKLA* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1368 264 PANTHER RETICULON-LIKE PROTEIN 2 263 - -
Tpr5g1368 264 PANTHER RETICULON 2 263 IPR045064 GO:0009617
Tpr5g1368 264 Pfam Reticulon 76 231 IPR003388 -
Tpr5g1368 264 ProSiteProfiles Reticulon domain profile. 75 264 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1368 Tpr-Chr5 26494717 26497301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1368 - - mtr:MTR_8g028450 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1368 5 26494717 26497301 Tpr1g0813 1 6801364 6803752 ECH
Tpr5g1368 5 26494717 26497301 Tpr5g1368 5 26494717 26497301 ECH
Tpr6g3658 6 40079672 40094006 Tpr5g1368 5 26494717 26497301 PCT