Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g1357 | ATGGAGGCAGATTGGGATCTATATGCTGTAATCAGACCTTACACCACCATCACCTCTTCCTCATCTTCCACCACCACCACCACAATAGCCACCCCATCAACACCTTCTTCCTCTGGTTTTGAAACTTCTACATCTTGCAACTTTTTCTCTCTTTACCCTGCAGAACAATCAATTCAAGTTTTGCCTTTGGAAACAAAAAGTTCCATTGAAGAATTGCATGATCTTTGCAAACCTTTCTTCCTTAAACCACAACCTCTTTCTTCTAATTCATTCTCTTATTCATCACCATCACCAAAATCACCTCACATACTACAACCAAAACAACACCATCATGCTGTCTCTGCTACAACCCCAAGATCTAAAAGAAGGAAGATTCAGCATAAGAAGGTATGTGAAGTGAAAGCTGAGAATCTCTCATCAGATATATGGGCATGGAGGAAATATGGTCAAAAACCCATTAAAGGATCACCATATCCAAGGGGATATTATAGATGTAGCAGTACAAAAGGGTGTCCAGCTAGAAAACAAGTTGAGAGGAAAAAATCAGACCCAACAATGTTCATTGTAACATATACCGGTGAACATAGTCACCTTGCTCCAACACATAGAAATTCTCTTGCTGGTTCAACACGACAGAAGCCATTGTCACCAAAAACTATCACTGCCGAAGACTCTTCTCAACCCTTTGCAAAACAAGTTTCTCCACCTATCTCAGGAGCTGAAGAGGAAAATGGTACACCCTTAAGTACAAAATCAGATAGCAAAGAGGATTTGGAAGATTTGATGAATGATGATGATGTGGAAAATGAATTTGAGTTATCTGATATGGTTGTATCAGATGATTTCTTTGAAGGTTTAGATGAATTGGAAGGTTTTACTAGTATCTAG | 888 | 0.3908 | MEADWDLYAVIRPYTTITSSSSSTTTTTIATPSTPSSSGFETSTSCNFFSLYPAEQSIQVLPLETKSSIEELHDLCKPFFLKPQPLSSNSFSYSSPSPKSPHILQPKQHHHAVSATTPRSKRRKIQHKKVCEVKAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERKKSDPTMFIVTYTGEHSHLAPTHRNSLAGSTRQKPLSPKTITAEDSSQPFAKQVSPPISGAEEENGTPLSTKSDSKEDLEDLMNDDDVENEFELSDMVVSDDFFEGLDELEGFTSI* | 296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g1357 | 295 | Pfam | WRKY DNA -binding domain | 141 | 197 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g1357 | 295 | MobiDBLite | consensus disorder prediction | 198 | 265 | - | - | |
Tpr5g1357 | 295 | MobiDBLite | consensus disorder prediction | 198 | 233 | - | - | |
Tpr5g1357 | 295 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 1 | 293 | - | - | |
Tpr5g1357 | 295 | SUPERFAMILY | WRKY DNA-binding domain | 136 | 199 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g1357 | 295 | SMART | WRKY_cls | 139 | 199 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g1357 | 295 | ProSiteProfiles | WRKY domain profile. | 134 | 200 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g1357 | 295 | MobiDBLite | consensus disorder prediction | 114 | 128 | - | - | |
Tpr5g1357 | 295 | Gene3D | WRKY domain | 123 | 193 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr5g1357 | 295 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 1 | 293 | IPR044810 | GO:0003700 | |
Tpr5g1357 | 295 | MobiDBLite | consensus disorder prediction | 91 | 128 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g1357 | Tpr-Chr5 | 26425817 | 26427879 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g1357 | 1 | 289 | WRKY Transcription Factor Family | AT4G01250 | 46.179 | 5.09e-73 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tpr5g1357 | WRKY | 4.6e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g1357 | K13425 | - | gmx:100170675 | 320.472 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tpr5g1357 | 5 | 26425817 | 26427879 | Tpr1g0807 | 1 | 6746526 | 6748204 | ECH | |
Tpr5g1357 | 5 | 26425817 | 26427879 | Tpr5g1357 | 5 | 26425817 | 26427879 | ECH | |
Tpr5g1357 | 5 | 26425817 | 26427879 | Tpr6g3636 | 6 | 39636773 | 39638680 | ECH | |
Tpr3g0607 | 3 | 5958344 | 5960088 | Tpr5g1357 | 5 | 26425817 | 26427879 | ECH | |
Tpr6g3636 | 6 | 39636773 | 39638680 | Tpr5g1357 | 5 | 26425817 | 26427879 | PCT |