Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1357 ATGGAGGCAGATTGGGATCTATATGCTGTAATCAGACCTTACACCACCATCACCTCTTCCTCATCTTCCACCACCACCACCACAATAGCCACCCCATCAACACCTTCTTCCTCTGGTTTTGAAACTTCTACATCTTGCAACTTTTTCTCTCTTTACCCTGCAGAACAATCAATTCAAGTTTTGCCTTTGGAAACAAAAAGTTCCATTGAAGAATTGCATGATCTTTGCAAACCTTTCTTCCTTAAACCACAACCTCTTTCTTCTAATTCATTCTCTTATTCATCACCATCACCAAAATCACCTCACATACTACAACCAAAACAACACCATCATGCTGTCTCTGCTACAACCCCAAGATCTAAAAGAAGGAAGATTCAGCATAAGAAGGTATGTGAAGTGAAAGCTGAGAATCTCTCATCAGATATATGGGCATGGAGGAAATATGGTCAAAAACCCATTAAAGGATCACCATATCCAAGGGGATATTATAGATGTAGCAGTACAAAAGGGTGTCCAGCTAGAAAACAAGTTGAGAGGAAAAAATCAGACCCAACAATGTTCATTGTAACATATACCGGTGAACATAGTCACCTTGCTCCAACACATAGAAATTCTCTTGCTGGTTCAACACGACAGAAGCCATTGTCACCAAAAACTATCACTGCCGAAGACTCTTCTCAACCCTTTGCAAAACAAGTTTCTCCACCTATCTCAGGAGCTGAAGAGGAAAATGGTACACCCTTAAGTACAAAATCAGATAGCAAAGAGGATTTGGAAGATTTGATGAATGATGATGATGTGGAAAATGAATTTGAGTTATCTGATATGGTTGTATCAGATGATTTCTTTGAAGGTTTAGATGAATTGGAAGGTTTTACTAGTATCTAG 888 0.3908 MEADWDLYAVIRPYTTITSSSSSTTTTTIATPSTPSSSGFETSTSCNFFSLYPAEQSIQVLPLETKSSIEELHDLCKPFFLKPQPLSSNSFSYSSPSPKSPHILQPKQHHHAVSATTPRSKRRKIQHKKVCEVKAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERKKSDPTMFIVTYTGEHSHLAPTHRNSLAGSTRQKPLSPKTITAEDSSQPFAKQVSPPISGAEEENGTPLSTKSDSKEDLEDLMNDDDVENEFELSDMVVSDDFFEGLDELEGFTSI* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1357 295 Pfam WRKY DNA -binding domain 141 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1357 295 MobiDBLite consensus disorder prediction 198 265 - -
Tpr5g1357 295 MobiDBLite consensus disorder prediction 198 233 - -
Tpr5g1357 295 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 293 - -
Tpr5g1357 295 SUPERFAMILY WRKY DNA-binding domain 136 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr5g1357 295 SMART WRKY_cls 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1357 295 ProSiteProfiles WRKY domain profile. 134 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1357 295 MobiDBLite consensus disorder prediction 114 128 - -
Tpr5g1357 295 Gene3D WRKY domain 123 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr5g1357 295 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 293 IPR044810 GO:0003700
Tpr5g1357 295 MobiDBLite consensus disorder prediction 91 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1357 Tpr-Chr5 26425817 26427879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1357 1 289 WRKY Transcription Factor Family AT4G01250 46.179 5.09e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr5g1357 WRKY 4.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1357 K13425 - gmx:100170675 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1357 5 26425817 26427879 Tpr1g0807 1 6746526 6748204 ECH
Tpr5g1357 5 26425817 26427879 Tpr5g1357 5 26425817 26427879 ECH
Tpr5g1357 5 26425817 26427879 Tpr6g3636 6 39636773 39638680 ECH
Tpr3g0607 3 5958344 5960088 Tpr5g1357 5 26425817 26427879 ECH
Tpr6g3636 6 39636773 39638680 Tpr5g1357 5 26425817 26427879 PCT