Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g1341 | ATGGTATCAGTGAACCCTAATCCAGCACAAGGTTTCCATTTCTTCGATCCTTCAAACATGGGTCTTCCTGGCGTCAACAATCTTCCGCCGCCACCGCCGTCACATACTAGCGCCGCTGCTACTGAGGATCCGAGTAAGAAGATCCGAAAACCATACACGATTACTAAATCTAGAGAGAGTTGGACTGATCAGGAGCATGAGAAGTTTCTAGAAGCTCTCCAATTATTCGATCGTGACTGGAAGAAGATTGAAGCCTTTGTTGGTTCGAAAACAGTTATCCAGATACGAAGTCATGCACAGAAGTATTTTCTCAAAGTTCAGAAGAGTGGAACAAGTGAACATGTACCTCCTCCTCGGCCAAAGAGAAAAGCTGCTCACCCATACCCTCAAAAAGCTCCCAAAAACGCTCCTACTGCATCCCAAGTCATGGGTCCATTGCAATCTTCAGCTGCTTTTGTTGACCCAGCATACATTTATAGCACAGATTCATCATCTGTGCTTGGAACACCAGTTACTAGTCTGCCTTTATCATCTTGGAATCATAATGCTGCACCACCAGCCAGTGTGCCACAAGTGGCTACAGATGACACGGGATGGACTGGATCTGGACAAGCTGTTCCTCTTAATTGTTGCTATAGCAGCAGTAATGAGAGCGCTCGTGCAGCTGGGCCAAGTAGTAAAGGGATCAATCAAGGCAACGTGGGCAAGCCAGTTAAAGTCATGCCAGATTTTGCACAAGTATACAACTTCATTGGCAGTGTATTTGATCCAAATTCAACTAATCACCTACACAGACTAAAGCAGATGGACCCCATAAATGTTGAAACGGCACTGTTGTTGATGAGAAACCTCTCCATTAATTTAACTAGTCCTGAATTTGAGGATCATAAGAGGCTACTGTCATCATATGATCCTGATGGTGAGAAGGCAAAGTTTGCTAATCCAAGCAGCAAATCCGTGACTGTTAAATCCGAAAATGCTGTTCTGTCTGCTTAG | 996 | 0.4458 | MVSVNPNPAQGFHFFDPSNMGLPGVNNLPPPPPSHTSAAATEDPSKKIRKPYTITKSRESWTDQEHEKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKNAPTASQVMGPLQSSAAFVDPAYIYSTDSSSVLGTPVTSLPLSSWNHNAAPPASVPQVATDDTGWTGSGQAVPLNCCYSSSNESARAAGPSSKGINQGNVGKPVKVMPDFAQVYNFIGSVFDPNSTNHLHRLKQMDPINVETALLLMRNLSINLTSPEFEDHKRLLSSYDPDGEKAKFANPSSKSVTVKSENAVLSA* | 332 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g1341 | 331 | SMART | sant | 57 | 105 | IPR001005 | - | |
Tpr5g1341 | 331 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 53 | 107 | IPR017930 | - | |
Tpr5g1341 | 331 | Gene3D | - | 61 | 108 | - | - | |
Tpr5g1341 | 331 | MobiDBLite | consensus disorder prediction | 23 | 48 | - | - | |
Tpr5g1341 | 331 | PANTHER | SWI/SNF COMPLEX-RELATED | 2 | 326 | - | - | |
Tpr5g1341 | 331 | CDD | SANT | 60 | 103 | IPR001005 | - | |
Tpr5g1341 | 331 | ProSiteProfiles | Myb-like domain profile. | 53 | 103 | IPR001005 | - | |
Tpr5g1341 | 331 | Pfam | Myb-like DNA-binding domain | 58 | 103 | IPR001005 | - | |
Tpr5g1341 | 331 | PANTHER | MYB TRANSCRIPTION FACTOR | 2 | 326 | - | - | |
Tpr5g1341 | 331 | MobiDBLite | consensus disorder prediction | 108 | 140 | - | - | |
Tpr5g1341 | 331 | SUPERFAMILY | Homeodomain-like | 52 | 108 | IPR009057 | - | |
Tpr5g1341 | 331 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 56 | 105 | IPR006447 | GO:0003677 | |
Tpr5g1341 | 331 | ProSiteProfiles | SANT domain profile. | 56 | 107 | IPR017884 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g1341 | Tpr-Chr5 | 26230400 | 26238125 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Tpr5g1341 | Myb_DNA-binding | 5.6e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g1341 | - | - | gmx:778090 | 508.449 |