LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g1335	ATGTCTGTTGAATCAGCTGAGAATAACATCAGAGGAATACCAACTCATGGTGGACACTACTTGCAGTACAATATCTATGGTAACCTCTTTGAGGTTTCTAGGAAATATGTCCCTCCTATTCGTCCTGTCGGTAGAGGTGCTTATGGTATTGTTTGTGCTGCTGTAAATGCTGAGACACGCGAGGAAGTTGCCATTAAGAAGATTGGCAATGCATTTGACAACAGAATAGATGCTAAAAGGACCTTACGGGAAATCAAACTTCTTCGGCATATGGACCATGAAAATGTGATGTCGATTAAAGATATTATAAGACCTCCACAGAAGGAGAACTTCAATGATGTGTACATTGTTTCTGAGTTGATGGATACAGATCTACATCAAATAATACGTTCCAATCAACCAATGACAGATGATCATTGTCGGTATTTTGTGTATCAGCTGTTACGAGGGCTCAAATACGTACATTCAGCAAATGTTTTGCACCGGGACCTCAAGCCTAGCAATTTGCTACTGAATGCTAACTGTGACCTTAAGATCGGAGACTTTGGTCTCGCTAGAACTACATCAGAAACAGATTTTATGACTGAGTATGTGGTTACTCGGTGGTATCGAGCTCCCGAACTGCTTCTTAATTGTTCAGAATATACAGCAGCCATTGATATTTGGTCTGTTGGTTGCATACTTGGTGAAATCGTAACAAGGCAACCCCTCTTTCCTGGAAGAGATTATGTTCATCAGCTGAGACTGGTCACAGAGCTGATAGGTTCACCTGATGATGCCAGCCTTGGATTCCTACGCAGCGAAAATGCTCGTAGATACGTAAGACAGCTTCCACAATATCCAAAACAGAATTTTTCTGCTAGGTTTCCCAACATGTCTCCAGGTGCTGTTGATTTGCTAGAGAAGATGCTTATCTTTGATCCGAGCAAGCGAATTAAAGTTGATGAGGCGTTGTGCCATCCATACATGGCACCTCTTCATGATATCAATGAGGAACCTGTATGTGCCAGACCTTTCAATTTTGATTTTGAGGAACCAATGTTCACTGAAGAAGATATCAAGGAACTCATCTGGAAAGAAGCTGTGAGATTCAATCCTGATCCACCAATTCACTGA	1116	0.4158	MSVESAENNIRGIPTHGGHYLQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSIKDIIRPPQKENFNDVYIVSELMDTDLHQIIRSNQPMTDDHCRYFVYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIVTRQPLFPGRDYVHQLRLVTELIGSPDDASLGFLRSENARRYVRQLPQYPKQNFSARFPNMSPGAVDLLEKMLIFDPSKRIKVDEALCHPYMAPLHDINEEPVCARPFNFDFEEPMFTEEDIKELIWKEAVRFNPDPPIH*	372

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tpr5g1335	371	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	159	171	IPR008271	GO:0004672\|GO:0006468
Tpr5g1335	371	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	14	370	-	-
Tpr5g1335	371	ProSitePatterns	MAP kinase signature.	72	175	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
Tpr5g1335	371	Gene3D	Transferase(Phosphotransferase) domain 1	121	350	-	-
Tpr5g1335	371	ProSiteProfiles	Protein kinase domain profile.	37	323	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Tpr5g1335	371	Pfam	Protein kinase domain	41	323	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Tpr5g1335	371	SUPERFAMILY	Protein kinase-like (PK-like)	40	330	IPR011009	-
Tpr5g1335	371	ProSitePatterns	Protein kinases ATP-binding region signature.	43	67	IPR017441	GO:0005524
Tpr5g1335	371	CDD	STKc_TEY_MAPK	30	366	-	-
Tpr5g1335	371	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	14	370	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g1335	Tpr-Chr5	26057736	26062226	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g1335	1	366	MAP Kinase Gene Family	AT4G01370	84.140	0.0	678

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Tpr5g1335		Pkinase	5.3e-69	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g1335	K20600		-	gmx:100779469	706.057

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