Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1327 ATGTCTATTGCTAGTATGAATCAGCAGAGTTGTGAAGAAAGAGCCAAATGCAAGATCATAAATAAAGCACACATCAGTAGAACTAATAGCTGTCCGGCACTTTTGTGGAGTACAAAAAAATTTAAAGGCGGTGATACATTGGAGAATAAGCACCAGCGGATTGGTCGGACAGTTGACGCACGAGACGTAGCTGATGCGATACTGTTGACTTATGAGAATCATGAAGCAGAAGAGAGATACATATGCACTTCACAGGCTATCACGGCCCGAGATTTGGTGGAGAAATTGAAGAGTCTATTTCCAAACTACAAGTACCCTACAAATTATACTGAGTTGGATGATTACAGAATGCTGAGCTCAGAGAAACTGCAAAGTTTAGGTTGGAAATTCAGGCCATTGGAAGAAACATTAATTGATTCTGTTAAAAGCTATGAGGAATCTGGAGTACTCTAA 453 0.3996 MSIASMNQQSCEERAKCKIINKAHISRTNSCPALLWSTKKFKGGDTLENKHQRIGRTVDARDVADAILLTYENHEAEERYICTSQAITARDLVEKLKSLFPNYKYPTNYTELDDYRMLSSEKLQSLGWKFRPLEETLIDSVKSYEESGVL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1327 150 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 34 149 - -
Tpr5g1327 150 Gene3D - 20 150 - -
Tpr5g1327 150 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 34 149 - -
Tpr5g1327 150 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 146 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1327 Tpr-Chr5 25936856 25939456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1327 42 150 Monolignol Biosynthesis Gene Families AT2G33590 51.376 2.04e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1327 - - mtr:MTR_4g009040 164.851