Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1326 ATGGCAACAAACGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGGTTTGTAGCATCATGGCTTGTTAAGCTTCTTCTTGCCAAAGGTTACTCTGTCCATGGAACTGTCAGACAACCTGGTAGTAAGAAATATGAACACTTGCTTAAACTCGAGAGAGCTTCTGAGAACCTTACACTTTTCGAAGCAGATATCTTGAATTATGAATCTGTTTACAAAGCAATTGTCGGATGCACTGCTGTCTTCCATGTTGCAAGCCCTGTACCTTCAACAGTTGTACCAAATCCTGAGGTAACCAAAACATATTTCGAATCTTCTTCTCTTGTTTTCGGTGTATGTTTGGTTCCACTTTATGAGGAGGCAAAATTGATTCAAGATGTGTAG 390 0.4128 MATNGGANKKVCVTGAGGFVASWLVKLLLAKGYSVHGTVRQPGSKKYEHLLKLERASENLTLFEADILNYESVYKAIVGCTAVFHVASPVPSTVVPNPEVTKTYFESSSLVFGVCLVPLYEEAKLIQDV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1326 129 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 100 - -
Tpr5g1326 129 Pfam NAD dependent epimerase/dehydratase family 11 90 IPR001509 -
Tpr5g1326 129 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 8 100 - -
Tpr5g1326 129 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 122 IPR036291 -
Tpr5g1326 129 Gene3D - 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1326 Tpr-Chr5 25932176 25933732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1326 10 100 Monolignol Biosynthesis Gene Families AT2G33600 64.835 1.30e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1326 - - mtr:MTR_4g009040 174.866