Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1324 ATGGCATATACCTTCATAGATGATGAAGCATCTTCATCTTCATCTTCTTCTTGTTGGAGTAACCATGTTTTCTTGAGTTTTAGAGGCGAAGATACTCGCCGAGGTTTCACCGATCATCTTTTTGCTTCATTGGAAAGAAAAGGTATCAAAACATTTAAGGATGATTATGATCTTAATAAGGGAGAAAAGATATCAAATGAACTCAATAAAGCCATTGAAGAATCTATGTTTGCTATCATCATTCTCTCACCAAACTATGCTTCTTCAACATGGTGTTTAGATGAGCTACAAAAGATTGTTGAATGCAACAAAAGTTTTGGTCAAGCTGTTTTTCCAATCTTCTATGGTGTTGATCCTTCTGATGTTAGGAATCAGAGAGGAAGCTTTGATGAAGCTTTTAGAAAACATGAAGAAAAATTCAGAAATGATAGAATGAAAGTGGAAAGGTGGAGAGATGCTTTGAGAGAAGTTGCTAGTTACTCTGGCTGGGACTCCAAGGACAGGCATGAGGCTTCCTTGGTGGATACAGTAGTTGAACATATTCAGAAAAAATTGATTCCAAGATTGAAGGTTAAAGATAACCTTGTTGGAATGGATTCGCGGATAAAGGAAGTATATTCGCTACTAGGAATGGGATTAAACGACGTTCGCTTCATAGGCATATGGGGCATGGGCGGCATAGGAAAGACAACTGTTGCTAGAGAACTGTTTGAAACGATCAAAGACAAATTCAAGGTTAGTTGCTTTCTTGCAGACATTAGAGAAACAGTTTCTAAGATAAATGGCTTAGTTCACATCCAAAGTGAACTTCTTTCTCATCTCGATATAAGAAGCAACGATTTTTATAACGTTTATGATGGAAAAAAGATATTAGCAAACTCCTTAAGAAACAAAAAGGTTCTTCTTGTTCTTGATGATGTAAGTGAATTAAGCCAACTGGAGAATTTAGCCGGGAAGCAAGAATGGTTTGGTCCAGGAAGTAGAGTAATAATCACAAGTAGAGATAAGCACTTATTAATAACACATGGAGTGAATGAAACTTATAAGGCTCAAGGCTTAGTTAAAAAAGAAGCACTTAAGCTCTTTTGTTTGAAAGCATTTAAAGAAAATCATCCTAAAGAAGAGTATTTGAGTTTGTGTCAAGAAGTGGTTGAATATGTAAAAGGTCTTCCATTAGCACTTGATGTATTGGGTTCACATCTTTATGGAAGAACTGTTGAGGTTTGGCATAGTGCTTTAGAACAAATAAGAAGTGTTCCTCATTCCAAAATCCATGGTACATTGAAAATAAGCTATGATAGCTTACAATCTATGGAGAAAAATATGTTTCTAGATATTGCATGTTTCTTCAAAGGAATGGACAAAAATGCAGTAATAGAAATATTAGAAGATTGTGGTGATTATCCAAAAATTGGAATTGATATTTTGATTGAAAGATCTTTGGTAACTTTTGAAAGAGGGAACAATAAGTTGTGGATGCATGATTTGCTTCAAGAAATGGGAAGGAATATTGTGTTACAAGAATCTCCGAATGATCCTGGAAAACGCAGTAGGTTATGGTCTCAAAAAGACATTGATCAAGTATTGAGAAAAAATAAGGGAACTGATAAAATTCAAGGCATAGCTATGGACTTAGTTGAACCATATGAAGCAAGTTGGAACTATGAAGCCTTCTCCAAAATAAGTCAGCTAAGATTTCTCAAATTATGTGAAATAAAACTTCCCCTTGGCCTCAATTGCTTGCCTAGTTCACTAAAAGTTCTTGATTGGAGAGGTTGTCCTTTGAAAACTCTGCCACTCAATAATCATTTGGATGAAATTGTTGATCTCAAATTGTCTCATAGCAAAATAGAACAACTTTGGCATGGAACACAGTTTCTTGAAAATCTGAATTCCATCAACTTGAGCTTTTCGATGTCTCTAAAGCGATCGCCGGACTTTGTTGGTGTTCCAAATCTTGAATCATTGGTTCTTGATGGTTGTACAAGCTTAACTGAGATTCATCCCTCCCTTTTAAGCCACAAGAAACTTGTTCTATTGAATTTGAAAGGTTGCAAAAAGCTCAAAACTCTTCCATGTAAAATAGAGATGAGTTCCGTGAAGGTTTTACTTCTTTCTGGTTGCTGTGAATTTAAACATCTTCCGGAGTTCAATGAAAGCATGAAAAATCTATCACAGCTTTATTTAGAAGAGACTGCTATAACAAAACTACCATCTTCACTTGGATTTCTTGAATCTCTTACTCTTTTGGATTTAGAAAATTGCAAGAATCTTGTTTGTCTTCCAGATACAATATGTGAGTTGAAGTCCCTCTTAACTCTAAATGTTTCTGGCTGCTCGAAAATCCGTAGTTTTCCAGAAGGTCTAAAAGAAATCAAGTCTTTAGAGGAACTTTTGGCAAATGAAACTGCTATTGAAGAACTACCTTCATCGGTTTTTTATCTTGAAAACCTCAAAGTAATATCATTTTCTGGATGCAAAGGAGTAGTTTCCAAGTCAGTGAATACATTTTTTCTACCCTTTTCACAGCTACTAGGTAGTCCACAAGAACCTACTGGATTTAGATTGCCACCTAAGTTATATCTACCCTCTTTGGTGAAATTAAATTTAAGTTATTGCAATCTATCTGAAAAATCAATGCCAAAAGATTTTGCCAACTTATCTTCCTTGATTGCTTTGAATCTCGACGGAAACAATTTTGTTAGTACACCAAGTTGCATTTCACAACTTCCAAAGCTTGAATATCTTGGCCTAAACTGCTGTGAAATGCTTCAGACGTTGTCAGAGTTTCAATCAAGTATGAGGTTATTGGATGCAAGTAATTGTGGTTCGTTTGAAACTTCCAAATCCAATCTATCTAGACCATGCAGTCTCTTTGCTACGCGTCCACAACGACACTCACATTTACCAATAGTACTGGAGAGCTTTCTGAAGGCACATGAACTTGGTCTACCTAAAGCAAGATTTGACATGCTTATCACAGGGAGTGAAATTCCTTCATGGTTTACACCTTCAAAATATGTTAGTTGGACACATATGCCAGTCCCTCATGAGTATCCTCCAACTGAATGGGTAGGACTTGCTTTGTGTTTTATGTTGATTAGTTTTTATAATCAACCTGAGTTGTGTGATCATGAAGTAACTTGTTACTTGTTTGGACCCAACGGTAAGTTGTTTATCAAAAGCCGGCATTTATCTCCTATGGAACCCTATGTCCCTCACCTTTATATTCTCTATCTGTCCATCGAAGAATGTCGTGAGAGATTTTGTGAAGGTGGTGACTGCAGTCAAATTGAATTTGTCTTGAAAACTTACTGTTGTGATGCATTGCAAGTAAAAAGGTGCGGTTCTCGCTTGGTATGCAAGCAAGATGTTGAAGATGTTTACAAAAATTATTGCTAG 3402 0.3613 MAYTFIDDEASSSSSSSCWSNHVFLSFRGEDTRRGFTDHLFASLERKGIKTFKDDYDLNKGEKISNELNKAIEESMFAIIILSPNYASSTWCLDELQKIVECNKSFGQAVFPIFYGVDPSDVRNQRGSFDEAFRKHEEKFRNDRMKVERWRDALREVASYSGWDSKDRHEASLVDTVVEHIQKKLIPRLKVKDNLVGMDSRIKEVYSLLGMGLNDVRFIGIWGMGGIGKTTVARELFETIKDKFKVSCFLADIRETVSKINGLVHIQSELLSHLDIRSNDFYNVYDGKKILANSLRNKKVLLVLDDVSELSQLENLAGKQEWFGPGSRVIITSRDKHLLITHGVNETYKAQGLVKKEALKLFCLKAFKENHPKEEYLSLCQEVVEYVKGLPLALDVLGSHLYGRTVEVWHSALEQIRSVPHSKIHGTLKISYDSLQSMEKNMFLDIACFFKGMDKNAVIEILEDCGDYPKIGIDILIERSLVTFERGNNKLWMHDLLQEMGRNIVLQESPNDPGKRSRLWSQKDIDQVLRKNKGTDKIQGIAMDLVEPYEASWNYEAFSKISQLRFLKLCEIKLPLGLNCLPSSLKVLDWRGCPLKTLPLNNHLDEIVDLKLSHSKIEQLWHGTQFLENLNSINLSFSMSLKRSPDFVGVPNLESLVLDGCTSLTEIHPSLLSHKKLVLLNLKGCKKLKTLPCKIEMSSVKVLLLSGCCEFKHLPEFNESMKNLSQLYLEETAITKLPSSLGFLESLTLLDLENCKNLVCLPDTICELKSLLTLNVSGCSKIRSFPEGLKEIKSLEELLANETAIEELPSSVFYLENLKVISFSGCKGVVSKSVNTFFLPFSQLLGSPQEPTGFRLPPKLYLPSLVKLNLSYCNLSEKSMPKDFANLSSLIALNLDGNNFVSTPSCISQLPKLEYLGLNCCEMLQTLSEFQSSMRLLDASNCGSFETSKSNLSRPCSLFATRPQRHSHLPIVLESFLKAHELGLPKARFDMLITGSEIPSWFTPSKYVSWTHMPVPHEYPPTEWVGLALCFMLISFYNQPELCDHEVTCYLFGPNGKLFIKSRHLSPMEPYVPHLYILYLSIEECRERFCEGGDCSQIEFVLKTYCCDALQVKRCGSRLVCKQDVEDVYKNYC* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1324 1133 Pfam TIR domain 22 185 IPR000157 GO:0007165
Tpr5g1324 1133 Gene3D Ribonuclease Inhibitor 849 951 IPR032675 -
Tpr5g1324 1133 Gene3D - 352 442 IPR042197 -
Tpr5g1324 1133 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Tpr5g1324 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 764 IPR044974 GO:0006952
Tpr5g1324 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 767 1076 IPR044974 GO:0006952
Tpr5g1324 1133 SUPERFAMILY "Winged helix" DNA-binding domain 422 529 IPR036390 -
Tpr5g1324 1133 Pfam NB-ARC domain 211 438 IPR002182 GO:0043531
Tpr5g1324 1133 Gene3D - 182 346 IPR027417 -
Tpr5g1324 1133 PRINTS Disease resistance protein signature 218 233 - -
Tpr5g1324 1133 PRINTS Disease resistance protein signature 294 308 - -
Tpr5g1324 1133 PRINTS Disease resistance protein signature 387 401 - -
Tpr5g1324 1133 PRINTS Disease resistance protein signature 742 758 - -
Tpr5g1324 1133 SUPERFAMILY L domain-like 507 828 - -
Tpr5g1324 1133 SMART LRR_typ_2 792 815 IPR003591 -
Tpr5g1324 1133 SMART LRR_typ_2 862 886 IPR003591 -
Tpr5g1324 1133 SMART LRR_typ_2 887 910 IPR003591 -
Tpr5g1324 1133 SMART LRR_typ_2 650 674 IPR003591 -
Tpr5g1324 1133 SMART LRR_typ_2 721 744 IPR003591 -
Tpr5g1324 1133 Gene3D Ribonuclease Inhibitor 697 837 IPR032675 -
Tpr5g1324 1133 SUPERFAMILY RNI-like 862 955 - -
Tpr5g1324 1133 SMART till_3 20 160 IPR000157 GO:0007165
Tpr5g1324 1133 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 764 - -
Tpr5g1324 1133 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 767 1076 - -
Tpr5g1324 1133 Pfam Leucine Rich Repeat 608 625 IPR011713 -
Tpr5g1324 1133 Gene3D - 17 181 IPR035897 -
Tpr5g1324 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Tpr5g1324 1133 Gene3D Ribonuclease Inhibitor 550 696 IPR032675 -
Tpr5g1324 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1324 Tpr-Chr5 25913137 25919851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1324 28 823 WRKY Transcription Factor Family AT4G12020 33.907 6.06e-117 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1324 - - gmx:100815486 1559.27