Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1312 ATGACTACAACTTTTGTTCATAACCGGAGCCAACACTCCGGTCACCGAAGTACGCCGGATAATATGTCCCGTTCTTCTGATTTCAGCACTTCACATCACTCAACAACTTCCTCATCGTCTTCTTCCGGTAGCCGGAATCCAGTTATTGCCGCCGCCATGTCGGTTGCTGGATTGTTTGCTGCTTGTTTCACGCCGCCGGATGCTAATAATTCTAAGAGCGTTGTTGATTCTGAGGAGTTCAAATCTACTAATTCTGGTTCTGATGCATCAAATGCTTCAAGAGCTGGTAGTCAGAGAGGGCGTGGCTCAAACCGAGGTACTAACATCGGTTTATACAACACAATCCAGGGGAAAGAGCCTGGCATTGTCAAGTACACCATGGAGGAAATCATACAAGTCACAAGAAACTTTTCCCCGTCTTTCAAGATTGGTCAAGGCGGTTTTGGGGCAGTCTACAAGACCAAACTCCTGGATGGAACTATTGTTGCAGTAAAGCGAGCCAAGAAGAGTGTGCAAGAGAAAAATTTAGGTTCGGAGTTCCAGAGCGAGGTCCAAACACTATCAAGGGTCGAACATTTGAACTTGGTAAAGTTCTATGGATATTTGGAGCAAGGGGATGAAAGAATCATTGTAGTGGAGTATGTTCCTAATGGAACACTCAGAGAGCATTTAGATTGCCTTCATGGAAACGTTCTCGACCTTGCTGCTCGTCTAGACATTGCAATTGATGTATCCCATGCTCTCACCTATCTTCATGTTTATATGGATCATCCTATCATTCATAGAGACATAAAATCTTCCAACATTCTCCTCACCGAGCACTTTCGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAAGCACCGGACAGTGACTCTGGCATGACACATGTCTCTACTCAAGTTAAGGGAACTGCAGGCTACTTGGACCCTGAATACTTGAAAACCTATCAACTAACTGAAAAGAGTGATGTCTATTCATTCGGTGTTTTGCTTGTTGAACTTGTCACAGGAAGACGCCCCATTGAACCAAAATTTGAACTCAAAGAGAGAATAACAGTAAAATGGGCTATGAAGAGGTTTATAGAGGGAAACGCGATCTCAGTCTTGGACCCAAGACTGGATCAAACTTCTGCAAATAATTTGGCCTTAGAAAAGACACTTGAACTAGCTTTACAATGCTTGGCTCCTCATAGACAAAGCAGGCCTAACATGAAGAGATGTGCCGAGATCCTTTGGGCCATTCGCAAGGATCACAGGGAGATATCAGCTTCAAACTTTCGATCATATTCGACTACTTCCCAAAGGAGCGCCTCATTGAGAGAGTAA 1329 0.4409 MTTTFVHNRSQHSGHRSTPDNMSRSSDFSTSHHSTTSSSSSSGSRNPVIAAAMSVAGLFAACFTPPDANNSKSVVDSEEFKSTNSGSDASNASRAGSQRGRGSNRGTNIGLYNTIQGKEPGIVKYTMEEIIQVTRNFSPSFKIGQGGFGAVYKTKLLDGTIVAVKRAKKSVQEKNLGSEFQSEVQTLSRVEHLNLVKFYGYLEQGDERIIVVEYVPNGTLREHLDCLHGNVLDLAARLDIAIDVSHALTYLHVYMDHPIIHRDIKSSNILLTEHFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITVKWAMKRFIEGNAISVLDPRLDQTSANNLALEKTLELALQCLAPHRQSRPNMKRCAEILWAIRKDHREISASNFRSYSTTSQRSASLRE* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1312 442 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 9 431 - -
Tpr5g1312 442 ProSitePatterns Protein kinases ATP-binding region signature. 143 169 IPR017441 GO:0005524
Tpr5g1312 442 CDD STKc_IRAK 143 412 - -
Tpr5g1312 442 MobiDBLite consensus disorder prediction 74 108 - -
Tpr5g1312 442 Gene3D Transferase(Phosphotransferase) domain 1 215 437 - -
Tpr5g1312 442 ProSiteProfiles Protein kinase domain profile. 137 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1312 442 SMART serkin_6 137 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1312 442 MobiDBLite consensus disorder prediction 1 45 - -
Tpr5g1312 442 SUPERFAMILY Protein kinase-like (PK-like) 120 415 IPR011009 -
Tpr5g1312 442 PANTHER RECEPTOR-LIKE PROTEIN 55 9 431 - -
Tpr5g1312 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Tpr5g1312 442 Pfam Protein kinase domain 142 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1312 442 Gene3D Phosphorylase Kinase; domain 1 104 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1312 Tpr-Chr5 25709014 25713298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1312 84 426 Trihelix Transcription Factor Family AT1G70460 40.974 4.10e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Tpr5g1312 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1312 - - cam:101500599 732.25