Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1309 ATGTCACTCATTTTCATTTTCTTTCTCTTATCTCACTTCACTCTCTTCACTTCTCCTTCACCCATTAACAGCAACAACTCCAATGTCATTATTTTAACACCAAACAAAACCCTTTCAAGCCAAAATCAAACCTTTGAACTTTGTTTCTTAAATTTACAAAACCAAAACCAACAACAACCTCGTTACTATCTAGTTATCCGTTTCACTTCTCTTCCTTCACCAAACATCATTTGGGTCGCAAACCGTAACAAACCCATTTCATCTCTTTCCGGTTCATCTCTTCAATTAACCCAAACCGGTCAATTAGTACTCCTTACTCAAAACGCCGTCGTTTTATGGCAAACCAAAACCAATTTCAACACAAACAACAAAACCAGTACCACCATACTTCAACCGAAGCTTTTAGAAAATGGTAACTTCATTCTTGTTAATAATCACAACGGTGTCGTTTTATGGCAAAGTTTTGATGAACCAACTGACACGTGGCTACCAGGTATGAATCTAACTAGGGTTCATAATTTACTTTCATGGAAGACTTTAACAAACCCTAGTAATGGTTTTTATTCATTAAGGTTGAAACCACCGAATTATGGTCAATTTGAGTTAGTTTTCAATGAAACTGTATCTTATTGGTCTACTGGTAATTGGACTGGTGGGTCATTTAGTGATGTACCTGAGATGATGATTCCTTATCTTTATCGGTTTGATTTTAAAGACGCCTTTTTGCCGACTGCGTCGTTTGGATTCTCCGAAAGGACGATGGATAACGGTGTTAGACCGCCTACGATGTTTCGTGTTGAGCCGTTTGGTCAGATTCGGCAGTATACTTGGTCGAATCAGGCTGGTTCGTGGAATATGTTTTGGTCGAGGCCTGAATCGATTTGTTCGGTTCGGGGTGTTTGTGGGAAGTTTAGTGTTTGTACGGGGGAAATGTCGAGGGTTTGTGAGTGTGTTAAGGGTTTTGTGGCGGTTGACGGTGGTGGTTGGGGTTCGGGTGATTATTCGGAAGGTTGTTGGAGAGGGGAGAGGGTTTGTGATGAAAATGATGGTTTTGAAGATTTAGGTGCTGTTAGGTTTGGTTTTGGTAATGTGAGTACTTTTACGGCTAAATCTAAAAGCTTGTGTGAGAGTGGTTGCTTGGGTTCTTGTGATTGTGTTGGTTTGTCTTTTGATGAAAAGAATGGCTTTTGTAAGAGTTATTTTGGGTCTCTTTTTGATTTTCAAAATTTAACTGCTTTGGAGAGTGGTCGTGGTGATGGGAATGTGTTGTATGTCAGGGTTCCTGGTGGCAGGGGTGAGGGGAAGATTAAGAGGTTGAGTGGTAACGTTTTAAGTGGTGTTATAATTGGGTGTGTTTTGTTTTTGGTTTTGGGTGTGGTGGTGGTGACTTTGGTGGTGTTGATAAAGAGGAAGAGATTGAAGAAAGAGAATGATAATGAGTTTGATCCTATTTTGAATTTGAAGTTGTTTACTTACAAGGAGCTTCAATTGGCGACTCGAGGGTTTTCTGAGAAAGTTGGGCATGGTGGGTTTGGGACGGTGTTTAAAGGGGAGTTGAGTGATTCTACTGTTGTTGCGGTGAAGCGTTTGGAGAGGCCGGGAGGTGGGGAGAAAGAGTTTAGGGCCGAGATTTCAACGATTGGGAACATTCAACATGTTAATCTTATGAGGCTAAGAGGTTTTTGCTCTGAGAATGCGCATCGACTTTTGGTTTATGAGTACATGCCGAATGGTGCCCTTAGCGCTTATCTGCGAAAGGATGGGCCTTGTTTGAGTTGGGATGTTAGGTTCAGAGTGGCGATTGGAACTGCTAAAGGCATAGCGTATTTACACGAGGAATGTAGAAGTTGCATTATACATTGTGATATCAAACCTGAAAACATTCTTTTGGATGGTGATTTCACTGCCAATGTTTCTGATTTTGGATTGGCAAAGCTAATTGGCAGGGACTTCAGTAGGGTGTTGGCAACCATGAGGGGTACTTGGGGATATGTAGCACCGGAATGGATTTCTGGCGTTGAAATTACAACTAAAGCTGATGTTTACAGCTATGGAATGACATTGCTAGAACTCATAAGCGGTCGCCGGAATGTGGAGGCACCACCTTCGTCTGGTGATAGAAAGAGTGGTTGTGAGACAGAGGAGAAATGGTTCTTTCCTCCGTGGGCAGCACAGCTGATAATCGAGGATAATATGGCTGCTGTGGTTGATAAGAAGCTTGGAAATGTATATAACATTGAGGAGGTCAAGAGAGTAGCGATGGTAGCAGTTTGGTGCATTCAGGATGATGAGACAATGAGACCTACCATGGGTACGGTGGTGAAAATGTTAGAAGGGTTAGTGGAGGTGCCTCTTCCACCACCGCCTAAGTTGCTACAAGCGTTGGTTGCCGGAGAGTCCTTTCACGGTGTCAAGGCTTATTCAAGTAATGCAGTTTCTACTGTTGACAGTTCATCTGGTTACGACAACATGGAAGTGTCGGCTGCTGATTCAGAGTCATGTATAGGAGATGTTTTTTCAGAATCATAG 2529 0.4223 MSLIFIFFLLSHFTLFTSPSPINSNNSNVIILTPNKTLSSQNQTFELCFLNLQNQNQQQPRYYLVIRFTSLPSPNIIWVANRNKPISSLSGSSLQLTQTGQLVLLTQNAVVLWQTKTNFNTNNKTSTTILQPKLLENGNFILVNNHNGVVLWQSFDEPTDTWLPGMNLTRVHNLLSWKTLTNPSNGFYSLRLKPPNYGQFELVFNETVSYWSTGNWTGGSFSDVPEMMIPYLYRFDFKDAFLPTASFGFSERTMDNGVRPPTMFRVEPFGQIRQYTWSNQAGSWNMFWSRPESICSVRGVCGKFSVCTGEMSRVCECVKGFVAVDGGGWGSGDYSEGCWRGERVCDENDGFEDLGAVRFGFGNVSTFTAKSKSLCESGCLGSCDCVGLSFDEKNGFCKSYFGSLFDFQNLTALESGRGDGNVLYVRVPGGRGEGKIKRLSGNVLSGVIIGCVLFLVLGVVVVTLVVLIKRKRLKKENDNEFDPILNLKLFTYKELQLATRGFSEKVGHGGFGTVFKGELSDSTVVAVKRLERPGGGEKEFRAEISTIGNIQHVNLMRLRGFCSENAHRLLVYEYMPNGALSAYLRKDGPCLSWDVRFRVAIGTAKGIAYLHEECRSCIIHCDIKPENILLDGDFTANVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVEITTKADVYSYGMTLLELISGRRNVEAPPSSGDRKSGCETEEKWFFPPWAAQLIIEDNMAAVVDKKLGNVYNIEEVKRVAMVAVWCIQDDETMRPTMGTVVKMLEGLVEVPLPPPPKLLQALVAGESFHGVKAYSSNAVSTVDSSSGYDNMEVSAADSESCIGDVFSES* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1309 842 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Tpr5g1309 842 ProSiteProfiles Bulb-type lectin domain profile. 23 155 IPR001480 -
Tpr5g1309 842 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 4 836 - -
Tpr5g1309 842 Gene3D Phosphorylase Kinase; domain 1 463 574 - -
Tpr5g1309 842 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Tpr5g1309 842 CDD STKc_IRAK 506 780 - -
Tpr5g1309 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Tpr5g1309 842 SMART serkin_6 500 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1309 842 SUPERFAMILY Protein kinase-like (PK-like) 483 778 IPR011009 -
Tpr5g1309 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 216 IPR036426 -
Tpr5g1309 842 Pfam D-mannose binding lectin 76 171 IPR001480 -
Tpr5g1309 842 Gene3D Transferase(Phosphotransferase) domain 1 575 783 - -
Tpr5g1309 842 ProSiteProfiles Protein kinase domain profile. 500 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1309 842 Pfam S-locus glycoprotein domain 211 323 IPR000858 GO:0048544
Tpr5g1309 842 CDD PAN_AP_plant 345 428 - -
Tpr5g1309 842 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 4 836 - -
Tpr5g1309 842 SMART blect_4 29 158 IPR001480 -
Tpr5g1309 842 PIRSF SRK 1 831 IPR024171 GO:0004674
Tpr5g1309 842 Gene3D - 24 155 IPR036426 -
Tpr5g1309 842 Pfam Protein kinase domain 503 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1309 Tpr-Chr5 25683505 25687187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1309 490 787 Receptor kinase-like Gene Family AT5G20050 46.624 1.36e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr5g1309 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1309 - - lja:Lj0g3v0252549.1 1111.67