Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g1309 | ATGTCACTCATTTTCATTTTCTTTCTCTTATCTCACTTCACTCTCTTCACTTCTCCTTCACCCATTAACAGCAACAACTCCAATGTCATTATTTTAACACCAAACAAAACCCTTTCAAGCCAAAATCAAACCTTTGAACTTTGTTTCTTAAATTTACAAAACCAAAACCAACAACAACCTCGTTACTATCTAGTTATCCGTTTCACTTCTCTTCCTTCACCAAACATCATTTGGGTCGCAAACCGTAACAAACCCATTTCATCTCTTTCCGGTTCATCTCTTCAATTAACCCAAACCGGTCAATTAGTACTCCTTACTCAAAACGCCGTCGTTTTATGGCAAACCAAAACCAATTTCAACACAAACAACAAAACCAGTACCACCATACTTCAACCGAAGCTTTTAGAAAATGGTAACTTCATTCTTGTTAATAATCACAACGGTGTCGTTTTATGGCAAAGTTTTGATGAACCAACTGACACGTGGCTACCAGGTATGAATCTAACTAGGGTTCATAATTTACTTTCATGGAAGACTTTAACAAACCCTAGTAATGGTTTTTATTCATTAAGGTTGAAACCACCGAATTATGGTCAATTTGAGTTAGTTTTCAATGAAACTGTATCTTATTGGTCTACTGGTAATTGGACTGGTGGGTCATTTAGTGATGTACCTGAGATGATGATTCCTTATCTTTATCGGTTTGATTTTAAAGACGCCTTTTTGCCGACTGCGTCGTTTGGATTCTCCGAAAGGACGATGGATAACGGTGTTAGACCGCCTACGATGTTTCGTGTTGAGCCGTTTGGTCAGATTCGGCAGTATACTTGGTCGAATCAGGCTGGTTCGTGGAATATGTTTTGGTCGAGGCCTGAATCGATTTGTTCGGTTCGGGGTGTTTGTGGGAAGTTTAGTGTTTGTACGGGGGAAATGTCGAGGGTTTGTGAGTGTGTTAAGGGTTTTGTGGCGGTTGACGGTGGTGGTTGGGGTTCGGGTGATTATTCGGAAGGTTGTTGGAGAGGGGAGAGGGTTTGTGATGAAAATGATGGTTTTGAAGATTTAGGTGCTGTTAGGTTTGGTTTTGGTAATGTGAGTACTTTTACGGCTAAATCTAAAAGCTTGTGTGAGAGTGGTTGCTTGGGTTCTTGTGATTGTGTTGGTTTGTCTTTTGATGAAAAGAATGGCTTTTGTAAGAGTTATTTTGGGTCTCTTTTTGATTTTCAAAATTTAACTGCTTTGGAGAGTGGTCGTGGTGATGGGAATGTGTTGTATGTCAGGGTTCCTGGTGGCAGGGGTGAGGGGAAGATTAAGAGGTTGAGTGGTAACGTTTTAAGTGGTGTTATAATTGGGTGTGTTTTGTTTTTGGTTTTGGGTGTGGTGGTGGTGACTTTGGTGGTGTTGATAAAGAGGAAGAGATTGAAGAAAGAGAATGATAATGAGTTTGATCCTATTTTGAATTTGAAGTTGTTTACTTACAAGGAGCTTCAATTGGCGACTCGAGGGTTTTCTGAGAAAGTTGGGCATGGTGGGTTTGGGACGGTGTTTAAAGGGGAGTTGAGTGATTCTACTGTTGTTGCGGTGAAGCGTTTGGAGAGGCCGGGAGGTGGGGAGAAAGAGTTTAGGGCCGAGATTTCAACGATTGGGAACATTCAACATGTTAATCTTATGAGGCTAAGAGGTTTTTGCTCTGAGAATGCGCATCGACTTTTGGTTTATGAGTACATGCCGAATGGTGCCCTTAGCGCTTATCTGCGAAAGGATGGGCCTTGTTTGAGTTGGGATGTTAGGTTCAGAGTGGCGATTGGAACTGCTAAAGGCATAGCGTATTTACACGAGGAATGTAGAAGTTGCATTATACATTGTGATATCAAACCTGAAAACATTCTTTTGGATGGTGATTTCACTGCCAATGTTTCTGATTTTGGATTGGCAAAGCTAATTGGCAGGGACTTCAGTAGGGTGTTGGCAACCATGAGGGGTACTTGGGGATATGTAGCACCGGAATGGATTTCTGGCGTTGAAATTACAACTAAAGCTGATGTTTACAGCTATGGAATGACATTGCTAGAACTCATAAGCGGTCGCCGGAATGTGGAGGCACCACCTTCGTCTGGTGATAGAAAGAGTGGTTGTGAGACAGAGGAGAAATGGTTCTTTCCTCCGTGGGCAGCACAGCTGATAATCGAGGATAATATGGCTGCTGTGGTTGATAAGAAGCTTGGAAATGTATATAACATTGAGGAGGTCAAGAGAGTAGCGATGGTAGCAGTTTGGTGCATTCAGGATGATGAGACAATGAGACCTACCATGGGTACGGTGGTGAAAATGTTAGAAGGGTTAGTGGAGGTGCCTCTTCCACCACCGCCTAAGTTGCTACAAGCGTTGGTTGCCGGAGAGTCCTTTCACGGTGTCAAGGCTTATTCAAGTAATGCAGTTTCTACTGTTGACAGTTCATCTGGTTACGACAACATGGAAGTGTCGGCTGCTGATTCAGAGTCATGTATAGGAGATGTTTTTTCAGAATCATAG | 2529 | 0.4223 | MSLIFIFFLLSHFTLFTSPSPINSNNSNVIILTPNKTLSSQNQTFELCFLNLQNQNQQQPRYYLVIRFTSLPSPNIIWVANRNKPISSLSGSSLQLTQTGQLVLLTQNAVVLWQTKTNFNTNNKTSTTILQPKLLENGNFILVNNHNGVVLWQSFDEPTDTWLPGMNLTRVHNLLSWKTLTNPSNGFYSLRLKPPNYGQFELVFNETVSYWSTGNWTGGSFSDVPEMMIPYLYRFDFKDAFLPTASFGFSERTMDNGVRPPTMFRVEPFGQIRQYTWSNQAGSWNMFWSRPESICSVRGVCGKFSVCTGEMSRVCECVKGFVAVDGGGWGSGDYSEGCWRGERVCDENDGFEDLGAVRFGFGNVSTFTAKSKSLCESGCLGSCDCVGLSFDEKNGFCKSYFGSLFDFQNLTALESGRGDGNVLYVRVPGGRGEGKIKRLSGNVLSGVIIGCVLFLVLGVVVVTLVVLIKRKRLKKENDNEFDPILNLKLFTYKELQLATRGFSEKVGHGGFGTVFKGELSDSTVVAVKRLERPGGGEKEFRAEISTIGNIQHVNLMRLRGFCSENAHRLLVYEYMPNGALSAYLRKDGPCLSWDVRFRVAIGTAKGIAYLHEECRSCIIHCDIKPENILLDGDFTANVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVEITTKADVYSYGMTLLELISGRRNVEAPPSSGDRKSGCETEEKWFFPPWAAQLIIEDNMAAVVDKKLGNVYNIEEVKRVAMVAVWCIQDDETMRPTMGTVVKMLEGLVEVPLPPPPKLLQALVAGESFHGVKAYSSNAVSTVDSSSGYDNMEVSAADSESCIGDVFSES* | 843 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g1309 | 842 | ProSiteProfiles | PAN/Apple domain profile. | 345 | 428 | IPR003609 | - | |
Tpr5g1309 | 842 | ProSiteProfiles | Bulb-type lectin domain profile. | 23 | 155 | IPR001480 | - | |
Tpr5g1309 | 842 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 4 | 836 | - | - | |
Tpr5g1309 | 842 | Gene3D | Phosphorylase Kinase; domain 1 | 463 | 574 | - | - | |
Tpr5g1309 | 842 | ProSitePatterns | Protein kinases ATP-binding region signature. | 506 | 528 | IPR017441 | GO:0005524 | |
Tpr5g1309 | 842 | CDD | STKc_IRAK | 506 | 780 | - | - | |
Tpr5g1309 | 842 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 618 | 630 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr5g1309 | 842 | SMART | serkin_6 | 500 | 781 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g1309 | 842 | SUPERFAMILY | Protein kinase-like (PK-like) | 483 | 778 | IPR011009 | - | |
Tpr5g1309 | 842 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 62 | 216 | IPR036426 | - | |
Tpr5g1309 | 842 | Pfam | D-mannose binding lectin | 76 | 171 | IPR001480 | - | |
Tpr5g1309 | 842 | Gene3D | Transferase(Phosphotransferase) domain 1 | 575 | 783 | - | - | |
Tpr5g1309 | 842 | ProSiteProfiles | Protein kinase domain profile. | 500 | 781 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g1309 | 842 | Pfam | S-locus glycoprotein domain | 211 | 323 | IPR000858 | GO:0048544 | |
Tpr5g1309 | 842 | CDD | PAN_AP_plant | 345 | 428 | - | - | |
Tpr5g1309 | 842 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 | 4 | 836 | - | - | |
Tpr5g1309 | 842 | SMART | blect_4 | 29 | 158 | IPR001480 | - | |
Tpr5g1309 | 842 | PIRSF | SRK | 1 | 831 | IPR024171 | GO:0004674 | |
Tpr5g1309 | 842 | Gene3D | - | 24 | 155 | IPR036426 | - | |
Tpr5g1309 | 842 | Pfam | Protein kinase domain | 503 | 774 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g1309 | Tpr-Chr5 | 25683505 | 25687187 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g1309 | 490 | 787 | Receptor kinase-like Gene Family | AT5G20050 | 46.624 | 1.36e-79 | 262 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Tpr5g1309 | Pkinase | 1.8e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g1309 | - | - | lja:Lj0g3v0252549.1 | 1111.67 |